RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 AEBP2Q6ZN18 517 aaPredicted RBP8.1□□□□□ -1.11
NEK1-209ENST00000638824 CHIC1Q5VXU3 224 aa7.46□□□□□ -1.22
NEK1-209ENST00000638824 NISCHQ9Y2I1 1504 aa6.93□□□□□ -1.3
NEK1-209ENST00000638824 PHF23Q9BUL5 403 aaPredicted RBP6.72□□□□□ -1.33
NEK1-209ENST00000638824 SENP3Q9H4L4 574 aaPredicted RBP6.61□□□□□ -1.35
NEK1-209ENST00000638824 FOXD1Q16676 465 aa6.35□□□□□ -1.39
NEK1-209ENST00000638824 CCDC180Q9P1Z9 1646 aa6.15□□□□□ -1.43
NEK1-209ENST00000638824 PPP6R1Q9UPN7 881 aa6.02□□□□□ -1.45
NEK1-209ENST00000638824 POTEDQ86YR6 584 aa5.96□□□□□ -1.46
NEK1-209ENST00000638824 ABCC9O60706 1549 aa5.94□□□□□ -1.46
NEK1-209ENST00000638824 ADRA2BP18089 450 aa5.91□□□□□ -1.46
NEK1-209ENST00000638824 PLPPR3Q6T4P5 718 aa5.9□□□□□ -1.47
NEK1-209ENST00000638824 ZCCHC6Q5VYS8 1495 aaKnown RBP5.8□□□□□ -1.48
NEK1-209ENST00000638824 PIAS4Q8N2W9 510 aaPredicted RBP5.8□□□□□ -1.48
NEK1-209ENST00000638824 MSH5O43196 834 aa5.8□□□□□ -1.48
NEK1-209ENST00000638824 DCAF8L2P0C7V8 631 aa5.76□□□□□ -1.49
NEK1-209ENST00000638824 RB1CC1Q8TDY2 1594 aa5.73□□□□□ -1.49
NEK1-209ENST00000638824 NACADO15069 1562 aa5.73□□□□□ -1.49
NEK1-209ENST00000638824 DCAF1Q9Y4B6 1507 aa5.71□□□□□ -1.49
NEK1-209ENST00000638824 MYO15BQ96JP2 1530 aa5.7□□□□□ -1.5
NEK1-209ENST00000638824 UNC13AQ9UPW8 1703 aa5.68□□□□□ -1.5
NEK1-209ENST00000638824 SCRIBQ14160 1630 aa5.65□□□□□ -1.51
NEK1-209ENST00000638824 SLC24A1O60721 1099 aa5.59□□□□□ -1.51
NEK1-209ENST00000638824 BICRAQ9NZM4 1560 aa5.58□□□□□ -1.52
NEK1-209ENST00000638824 SHROOM4Q9ULL8 1493 aa5.57□□□□□ -1.52
NEK1-209ENST00000638824 PABPN1Q86U42 306 aaKnown RBP eCLIP5.55□□□□□ -1.52
NEK1-209ENST00000638824 MAPK8IP2Q13387 824 aaPredicted RBP5.49□□□□□ -1.53
NEK1-209ENST00000638824 EIF4G1Q04637 1599 aaKnown RBP5.42□□□□□ -1.54
NEK1-209ENST00000638824 CECR2Q9BXF3 1484 aa5.41□□□□□ -1.54
NEK1-209ENST00000638824 SCAF1Q9H7N4 1312 aaKnown RBP5.4□□□□□ -1.55
NEK1-209ENST00000638824 SMARCA4P51532 1647 aa5.39□□□□□ -1.55
NEK1-209ENST00000638824 EHMT2Q96KQ7 1210 aa5.38□□□□□ -1.55
NEK1-209ENST00000638824 CC2D2AQ9P2K1 1620 aa5.38□□□□□ -1.55
NEK1-209ENST00000638824 MROH2BQ7Z745 1585 aa5.37□□□□□ -1.55
NEK1-209ENST00000638824 BAZ1AQ9NRL2 1556 aaPredicted RBP5.37□□□□□ -1.55
NEK1-209ENST00000638824 DNAJC5BQ9UF47 199 aa5.36□□□□□ -1.55
NEK1-209ENST00000638824 WIZO95785 1651 aa5.34□□□□□ -1.55
NEK1-209ENST00000638824 DMRT2Q9Y5R5 561 aa5.32□□□□□ -1.56
NEK1-209ENST00000638824 RSF1Q96T23 1441 aaPredicted RBP5.31□□□□□ -1.56
NEK1-209ENST00000638824 ATAD2BQ9ULI0 1458 aa5.31□□□□□ -1.56
NEK1-209ENST00000638824 PEG3Q9GZU2 1588 aa5.31□□□□□ -1.56
NEK1-209ENST00000638824 SMARCA2P51531 1590 aa5.3□□□□□ -1.56
NEK1-209ENST00000638824 HMGXB3Q12766 1538 aa5.28□□□□□ -1.56
NEK1-209ENST00000638824 BAZ1BQ9UIG0 1483 aaKnown RBP5.28□□□□□ -1.56
NEK1-209ENST00000638824 NCAPD3P42695 1498 aa5.27□□□□□ -1.57
NEK1-209ENST00000638824 SUPT5HO00267 1087 aaKnown RBP5.25□□□□□ -1.57
NEK1-209ENST00000638824 TOP2AP11388 1531 aaKnown RBP5.25□□□□□ -1.57
NEK1-209ENST00000638824 CCDC88BA6NC98 1476 aa5.18□□□□□ -1.58
NEK1-209ENST00000638824 NESP48681 1621 aa5.18□□□□□ -1.58
NEK1-209ENST00000638824 PPP4R3CPQ6ZMV5 832 aa5.17□□□□□ -1.58
NEK1-209ENST00000638824 RTN4Q9NQC3 1192 aaKnown RBP5.17□□□□□ -1.58
NEK1-209ENST00000638824 PRDM2Q13029 1718 aa5.16□□□□□ -1.58
NEK1-209ENST00000638824 KIF21AQ7Z4S6 1674 aa5.15□□□□□ -1.59
NEK1-209ENST00000638824 LAMC3Q9Y6N6 1575 aa5.15□□□□□ -1.59
NEK1-209ENST00000638824 HOXD11P31277 338 aaPredicted RBP5.13□□□□□ -1.59
NEK1-209ENST00000638824 NCBP3Q53F19 620 aaKnown RBP5.12□□□□□ -1.59
NEK1-209ENST00000638824 CADPSQ9ULU8 1353 aa5.12□□□□□ -1.59
NEK1-209ENST00000638824 CFTRP13569 1480 aa5.12□□□□□ -1.59
NEK1-209ENST00000638824 ERCC6Q03468 1493 aa5.1□□□□□ -1.59
NEK1-209ENST00000638824 FANCD2Q9BXW9 1451 aa5.09□□□□□ -1.59
NEK1-209ENST00000638824 THOC2Q8NI27 1593 aaKnown RBP5.09□□□□□ -1.6
NEK1-209ENST00000638824 CNKSR2Q8WXI2 1034 aa5.08□□□□□ -1.6
NEK1-209ENST00000638824 CEP164Q9UPV0 1460 aa5.08□□□□□ -1.6
NEK1-209ENST00000638824 PDS5BQ9NTI5 1447 aa5.08□□□□□ -1.6
NEK1-209ENST00000638824 ABCC8Q09428 1581 aa5.07□□□□□ -1.6
NEK1-209ENST00000638824 URB2Q14146 1524 aaKnown RBP5.05□□□□□ -1.6
NEK1-209ENST00000638824 RNF39Q9H2S5 420 aa5.05□□□□□ -1.6
NEK1-209ENST00000638824 MRC2Q9UBG0 1479 aa5.05□□□□□ -1.6
NEK1-209ENST00000638824 WDR62O43379 1518 aa5.04□□□□□ -1.6
NEK1-209ENST00000638824 RNF216Q9NWF9 866 aaPredicted RBP5.03□□□□□ -1.6
NEK1-209ENST00000638824 CUX1P39880 1505 aa5.03□□□□□ -1.6
NEK1-209ENST00000638824 SYNJ1O43426 1573 aa5.03□□□□□ -1.6
NEK1-209ENST00000638824 DNMBPQ6XZF7 1577 aa5.03□□□□□ -1.6
NEK1-209ENST00000638824 TOPBP1Q92547 1522 aa5.03□□□□□ -1.6
NEK1-209ENST00000638824 KCNA4P22459 653 aa5.02□□□□□ -1.61
NEK1-209ENST00000638824 BIVM-ERCC5R4GMW8 1640 aa5.01□□□□□ -1.61
NEK1-209ENST00000638824 TOP2BQ02880 1626 aa5.01□□□□□ -1.61
NEK1-209ENST00000638824 PRKCSHP14314 528 aaPredicted RBP5.01□□□□□ -1.61
NEK1-209ENST00000638824 WRNQ14191 1432 aaPredicted RBP eCLIP5□□□□□ -1.61
NEK1-209ENST00000638824 FGD5Q6ZNL6 1462 aa5□□□□□ -1.61
NEK1-209ENST00000638824 CUX2O14529 1486 aa4.99□□□□□ -1.61
NEK1-209ENST00000638824 POLA1P09884 1462 aaPredicted RBP4.99□□□□□ -1.61
NEK1-209ENST00000638824 WDR97A6NE52 1622 aa4.98□□□□□ -1.61
NEK1-209ENST00000638824 TARBP1Q13395 1621 aaKnown RBP4.98□□□□□ -1.61
NEK1-209ENST00000638824 CSRNP3Q8WYN3 585 aa4.98□□□□□ -1.61
NEK1-209ENST00000638824 RAD54L2Q9Y4B4 1467 aa4.98□□□□□ -1.61
NEK1-209ENST00000638824 NPM3O75607 178 aaKnown RBP4.97□□□□□ -1.61
NEK1-209ENST00000638824 DCAF8L1A6NGE4 600 aa4.96□□□□□ -1.61
NEK1-209ENST00000638824 EIF4G3O43432 1585 aaKnown RBP4.96□□□□□ -1.62
NEK1-209ENST00000638824 ZNF608Q9ULD9 1512 aaPredicted RBP4.96□□□□□ -1.62
NEK1-209ENST00000638824 IFT140Q96RY7 1462 aa4.95□□□□□ -1.62
NEK1-209ENST00000638824 SOGA1O94964 1423 aa4.95□□□□□ -1.62
NEK1-209ENST00000638824 DAXXQ9UER7 740 aaPredicted RBP4.95□□□□□ -1.62
NEK1-209ENST00000638824 PBRM1Q86U86 1689 aa4.94□□□□□ -1.62
NEK1-209ENST00000638824 CACNB1Q02641 598 aaPredicted RBP4.94□□□□□ -1.62
NEK1-209ENST00000638824 APLP2Q06481 763 aa4.94□□□□□ -1.62
NEK1-209ENST00000638824 ABCA5Q8WWZ7 1642 aa4.94□□□□□ -1.62
NEK1-209ENST00000638824 ABCA10Q8WWZ4 1543 aa4.93□□□□□ -1.62
NEK1-209ENST00000638824 AQRO60306 1485 aaKnown RBP eCLIP4.93□□□□□ -1.62
NEK1-209ENST00000638824 TRIM41Q8WV44 630 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms