RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 NISCHQ9Y2I1 1504 aa9.38□□□□□ -0.91
GABRA1-220ENST00000638159 DCAF8L2P0C7V8 631 aa9.35□□□□□ -0.91
GABRA1-220ENST00000638159 ABCC9O60706 1549 aa9.2□□□□□ -0.94
GABRA1-220ENST00000638159 AEBP2Q6ZN18 517 aaPredicted RBP8.89□□□□□ -0.99
GABRA1-220ENST00000638159 TRIM41Q8WV44 630 aa8.81□□□□□ -1
GABRA1-220ENST00000638159 PABPN1Q86U42 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
GABRA1-220ENST00000638159 CHIC1Q5VXU3 224 aa8.75□□□□□ -1.01
GABRA1-220ENST00000638159 DNAJC5Q9H3Z4 198 aa8.7□□□□□ -1.02
GABRA1-220ENST00000638159 DNAJC5BQ9UF47 199 aa8.63□□□□□ -1.03
GABRA1-220ENST00000638159 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
GABRA1-220ENST00000638159 ERCC6Q03468 1493 aa8.39□□□□□ -1.07
GABRA1-220ENST00000638159 RB1CC1Q8TDY2 1594 aa8.36□□□□□ -1.07
GABRA1-220ENST00000638159 CCDC180Q9P1Z9 1646 aa8.34□□□□□ -1.07
GABRA1-220ENST00000638159 CECR2Q9BXF3 1484 aa8.32□□□□□ -1.08
GABRA1-220ENST00000638159 OSCARQ8IYS5 282 aa8.15□□□□□ -1.1
GABRA1-220ENST00000638159 FBLN2P98095 1184 aa8.15□□□□□ -1.11
GABRA1-220ENST00000638159 FAM9AQ8IZU1 332 aaPredicted RBP8.12□□□□□ -1.11
GABRA1-220ENST00000638159 NACADO15069 1562 aa8.07□□□□□ -1.12
GABRA1-220ENST00000638159 NPM1P06748 294 aaKnown RBP eCLIP8.07□□□□□ -1.12
GABRA1-220ENST00000638159 CYB5RLQ6IPT4 315 aa8.05□□□□□ -1.12
GABRA1-220ENST00000638159 PHF23Q9BUL5 403 aaPredicted RBP7.99□□□□□ -1.13
GABRA1-220ENST00000638159 CUX2O14529 1486 aa7.98□□□□□ -1.13
GABRA1-220ENST00000638159 DCAF1Q9Y4B6 1507 aa7.92□□□□□ -1.14
GABRA1-220ENST00000638159 SCRIBQ14160 1630 aa7.9□□□□□ -1.15
GABRA1-220ENST00000638159 MYO15BQ96JP2 1530 aa7.87□□□□□ -1.15
GABRA1-220ENST00000638159 PDS5BQ9NTI5 1447 aa7.86□□□□□ -1.15
GABRA1-220ENST00000638159 CHMP7Q8WUX9 453 aaPredicted RBP7.82□□□□□ -1.16
GABRA1-220ENST00000638159 CC2D2AQ9P2K1 1620 aa7.82□□□□□ -1.16
GABRA1-220ENST00000638159 SHROOM4Q9ULL8 1493 aa7.8□□□□□ -1.16
GABRA1-220ENST00000638159 ILDR1Q86SU0 546 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-220ENST00000638159 TTBK1Q5TCY1 1321 aaPredicted RBP7.77□□□□□ -1.16
GABRA1-220ENST00000638159 PLPPR3Q6T4P5 718 aa7.75□□□□□ -1.17
GABRA1-220ENST00000638159 MYT1LQ9UL68 1186 aa7.74□□□□□ -1.17
GABRA1-220ENST00000638159 EIF4G1Q04637 1599 aaKnown RBP7.72□□□□□ -1.17
GABRA1-220ENST00000638159 ESF1Q9H501 851 aaKnown RBP7.69□□□□□ -1.18
GABRA1-220ENST00000638159 DISP3Q9P2K9 1392 aa7.68□□□□□ -1.18
GABRA1-220ENST00000638159 SMARCA2P51531 1590 aa7.67□□□□□ -1.18
GABRA1-220ENST00000638159 SCAF1Q9H7N4 1312 aaKnown RBP7.67□□□□□ -1.18
GABRA1-220ENST00000638159 ARID4BQ4LE39 1312 aaPredicted RBP7.67□□□□□ -1.18
GABRA1-220ENST00000638159 ZCCHC6Q5VYS8 1495 aaKnown RBP7.67□□□□□ -1.18
GABRA1-220ENST00000638159 FOXD1Q16676 465 aa7.64□□□□□ -1.19
GABRA1-220ENST00000638159 BAZ1BQ9UIG0 1483 aaKnown RBP7.61□□□□□ -1.19
GABRA1-220ENST00000638159 FAM69CQ0P6D2 419 aa7.61□□□□□ -1.19
GABRA1-220ENST00000638159 FBXO41Q8TF61 875 aa7.6□□□□□ -1.19
GABRA1-220ENST00000638159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.58□□□□□ -1.2
GABRA1-220ENST00000638159 HNRNPUL2Q1KMD3 747 aaKnown RBP7.58□□□□□ -1.2
GABRA1-220ENST00000638159 LMTK3Q96Q04 1460 aa7.58□□□□□ -1.2
GABRA1-220ENST00000638159 CEP164Q9UPV0 1460 aa7.52□□□□□ -1.21
GABRA1-220ENST00000638159 MRC2Q9UBG0 1479 aa7.51□□□□□ -1.21
GABRA1-220ENST00000638159 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
GABRA1-220ENST00000638159 DCAF8L1A6NGE4 600 aa7.51□□□□□ -1.21
GABRA1-220ENST00000638159 SOCS7O14512 581 aa7.49□□□□□ -1.21
GABRA1-220ENST00000638159 UNC13AQ9UPW8 1703 aa7.47□□□□□ -1.21
GABRA1-220ENST00000638159 DMRT2Q9Y5R5 561 aa7.47□□□□□ -1.21
GABRA1-220ENST00000638159 NCAPD3P42695 1498 aa7.46□□□□□ -1.22
GABRA1-220ENST00000638159 NESP48681 1621 aa7.44□□□□□ -1.22
GABRA1-220ENST00000638159 BICRAQ9NZM4 1560 aa7.43□□□□□ -1.22
GABRA1-220ENST00000638159 SENP3Q9H4L4 574 aaPredicted RBP7.41□□□□□ -1.22
GABRA1-220ENST00000638159 ATAD2BQ9ULI0 1458 aa7.39□□□□□ -1.23
GABRA1-220ENST00000638159 BAZ1AQ9NRL2 1556 aaPredicted RBP7.36□□□□□ -1.23
GABRA1-220ENST00000638159 EHMT2Q96KQ7 1210 aa7.36□□□□□ -1.23
GABRA1-220ENST00000638159 FANCD2Q9BXW9 1451 aa7.36□□□□□ -1.23
GABRA1-220ENST00000638159 KCNH8Q96L42 1107 aa7.36□□□□□ -1.23
GABRA1-220ENST00000638159 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
GABRA1-220ENST00000638159 MLECQ14165 292 aa7.35□□□□□ -1.23
GABRA1-220ENST00000638159 ARHGEF11O15085 1522 aa7.34□□□□□ -1.23
GABRA1-220ENST00000638159 LAMC3Q9Y6N6 1575 aa7.34□□□□□ -1.24
GABRA1-220ENST00000638159 UBAP1LF5GYI3 381 aa7.33□□□□□ -1.24
GABRA1-220ENST00000638159 IFT140Q96RY7 1462 aa7.32□□□□□ -1.24
GABRA1-220ENST00000638159 RSF1Q96T23 1441 aaPredicted RBP7.31□□□□□ -1.24
GABRA1-220ENST00000638159 CERKQ8TCT0 537 aa7.3□□□□□ -1.24
GABRA1-220ENST00000638159 TDRD9Q8NDG6 1382 aaKnown RBP7.29□□□□□ -1.24
GABRA1-220ENST00000638159 ABCC8Q09428 1581 aa7.29□□□□□ -1.24
GABRA1-220ENST00000638159 BCANQ96GW7 911 aa7.28□□□□□ -1.24
GABRA1-220ENST00000638159 PIP4K2BP78356 416 aa7.28□□□□□ -1.24
GABRA1-220ENST00000638159 MEX3CQ5U5Q3 659 aaKnown RBP7.27□□□□□ -1.24
GABRA1-220ENST00000638159 PEG3Q9GZU2 1588 aa7.27□□□□□ -1.25
GABRA1-220ENST00000638159 GAPVD1Q14C86 1478 aa7.25□□□□□ -1.25
GABRA1-220ENST00000638159 TOM1O60784 492 aa7.25□□□□□ -1.25
GABRA1-220ENST00000638159 JPH4Q96JJ6 628 aa7.24□□□□□ -1.25
GABRA1-220ENST00000638159 SOGA1O94964 1423 aa7.24□□□□□ -1.25
GABRA1-220ENST00000638159 HMGXB3Q12766 1538 aa7.22□□□□□ -1.25
GABRA1-220ENST00000638159 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
GABRA1-220ENST00000638159 POGZQ7Z3K3 1410 aa7.22□□□□□ -1.25
GABRA1-220ENST00000638159 C14orf37Q86TY3 774 aa7.21□□□□□ -1.26
GABRA1-220ENST00000638159 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
GABRA1-220ENST00000638159 AQRO60306 1485 aaKnown RBP eCLIP7.2□□□□□ -1.26
GABRA1-220ENST00000638159 PRDM2Q13029 1718 aa7.2□□□□□ -1.26
GABRA1-220ENST00000638159 SUPT5HO00267 1087 aaKnown RBP7.2□□□□□ -1.26
GABRA1-220ENST00000638159 RANGAP1P46060 587 aaPredicted RBP7.19□□□□□ -1.26
GABRA1-220ENST00000638159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.19□□□□□ -1.26
GABRA1-220ENST00000638159 ARID3CA6NKF2 412 aa7.19□□□□□ -1.26
GABRA1-220ENST00000638159 SF3B2Q13435 895 aaKnown RBP7.19□□□□□ -1.26
GABRA1-220ENST00000638159 RIMBP3CA6NJZ7 1639 aa7.19□□□□□ -1.26
GABRA1-220ENST00000638159 RIMBP3BA6NNM3 1639 aa7.19□□□□□ -1.26
GABRA1-220ENST00000638159 RIMBP3Q9UFD9 1639 aa7.19□□□□□ -1.26
GABRA1-220ENST00000638159 HSPA2P54652 639 aa7.18□□□□□ -1.26
GABRA1-220ENST00000638159 STAG3Q9UJ98 1225 aa7.18□□□□□ -1.26
GABRA1-220ENST00000638159 SYNJ1O43426 1573 aa7.18□□□□□ -1.26
GABRA1-220ENST00000638159 KDM4FA0A1W2PPD8 638 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms