RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.82
CACNA1A-248ENST00000637774 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
CACNA1A-248ENST00000637774 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
CACNA1A-248ENST00000637774 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-248ENST00000637774 CCDC180Q9P1Z9 1646 aa16.98■□□□□ 0.31
CACNA1A-248ENST00000637774 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-248ENST00000637774 ABCC9O60706 1549 aa16.68■□□□□ 0.26
CACNA1A-248ENST00000637774 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
CACNA1A-248ENST00000637774 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.19
CACNA1A-248ENST00000637774 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
CACNA1A-248ENST00000637774 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
CACNA1A-248ENST00000637774 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
CACNA1A-248ENST00000637774 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-248ENST00000637774 NACADO15069 1562 aa15.99■□□□□ 0.15
CACNA1A-248ENST00000637774 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-248ENST00000637774 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
CACNA1A-248ENST00000637774 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
CACNA1A-248ENST00000637774 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
CACNA1A-248ENST00000637774 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
CACNA1A-248ENST00000637774 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
CACNA1A-248ENST00000637774 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
CACNA1A-248ENST00000637774 PCGF6Q9BYE7 350 aa15.65■□□□□ 0.1
CACNA1A-248ENST00000637774 WIZO95785 1651 aa15.57■□□□□ 0.08
CACNA1A-248ENST00000637774 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-248ENST00000637774 PPARGC1BQ86YN6 1023 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-248ENST00000637774 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-248ENST00000637774 RANGAP1P46060 587 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-248ENST00000637774 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
CACNA1A-248ENST00000637774 UBTFP17480 764 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-248ENST00000637774 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
CACNA1A-248ENST00000637774 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.04
CACNA1A-248ENST00000637774 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
CACNA1A-248ENST00000637774 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-248ENST00000637774 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
CACNA1A-248ENST00000637774 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-248ENST00000637774 TRIM26Q12899 539 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-248ENST00000637774 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
CACNA1A-248ENST00000637774 SMARCA2P51531 1590 aa15.16■□□□□ 0.02
CACNA1A-248ENST00000637774 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
CACNA1A-248ENST00000637774 HRCP23327 699 aa15.12■□□□□ 0.01
CACNA1A-248ENST00000637774 SOGA1O94964 1423 aa15.12■□□□□ 0.01
CACNA1A-248ENST00000637774 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
CACNA1A-248ENST00000637774 RUSC2Q8N2Y8 1516 aa15.02□□□□□ -0.01
CACNA1A-248ENST00000637774 APLP2Q06481 763 aa14.99□□□□□ -0.01
CACNA1A-248ENST00000637774 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
CACNA1A-248ENST00000637774 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
CACNA1A-248ENST00000637774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-248ENST00000637774 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
CACNA1A-248ENST00000637774 CCER1Q8TC90 406 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-248ENST00000637774 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
CACNA1A-248ENST00000637774 ATP1B4Q9UN42 357 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-248ENST00000637774 EEA1Q15075 1411 aa14.82□□□□□ -0.04
CACNA1A-248ENST00000637774 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-248ENST00000637774 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
CACNA1A-248ENST00000637774 TNIKQ9UKE5 1360 aa14.81□□□□□ -0.04
CACNA1A-248ENST00000637774 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
CACNA1A-248ENST00000637774 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
CACNA1A-248ENST00000637774 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
CACNA1A-248ENST00000637774 P3H3Q8IVL6 736 aa14.75□□□□□ -0.05
CACNA1A-248ENST00000637774 CLIP1P30622 1438 aa14.74□□□□□ -0.05
CACNA1A-248ENST00000637774 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
CACNA1A-248ENST00000637774 CC2D2AQ9P2K1 1620 aa14.72□□□□□ -0.05
CACNA1A-248ENST00000637774 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.05
CACNA1A-248ENST00000637774 HMGXB3Q12766 1538 aa14.71□□□□□ -0.05
CACNA1A-248ENST00000637774 ZEB1P37275 1124 aaPredicted RBP14.71□□□□□ -0.06
CACNA1A-248ENST00000637774 ITGAEP38570 1179 aa14.69□□□□□ -0.06
CACNA1A-248ENST00000637774 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
CACNA1A-248ENST00000637774 CFTRP13569 1480 aa14.68□□□□□ -0.06
CACNA1A-248ENST00000637774 CUX2O14529 1486 aa14.66□□□□□ -0.06
CACNA1A-248ENST00000637774 NESP48681 1621 aa14.64□□□□□ -0.07
CACNA1A-248ENST00000637774 CUX1P39880 1505 aa14.62□□□□□ -0.07
CACNA1A-248ENST00000637774 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
CACNA1A-248ENST00000637774 TOP2BQ02880 1626 aa14.58□□□□□ -0.08
CACNA1A-248ENST00000637774 CARMIL1Q5VZK9 1371 aa14.55□□□□□ -0.08
CACNA1A-248ENST00000637774 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
CACNA1A-248ENST00000637774 TDRD9Q8NDG6 1382 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-248ENST00000637774 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
CACNA1A-248ENST00000637774 KANK4Q5T7N3 995 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-248ENST00000637774 IGF1RP08069 1367 aa14.51□□□□□ -0.09
CACNA1A-248ENST00000637774 VPS8Q8N3P4 1428 aa14.5□□□□□ -0.09
CACNA1A-248ENST00000637774 ARID3CA6NKF2 412 aa14.5□□□□□ -0.09
CACNA1A-248ENST00000637774 FBLN2P98095 1184 aa14.47□□□□□ -0.09
CACNA1A-248ENST00000637774 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-248ENST00000637774 KIF21BO75037 1637 aa14.45□□□□□ -0.1
CACNA1A-248ENST00000637774 PRXQ9BXM0 1461 aa14.44□□□□□ -0.1
CACNA1A-248ENST00000637774 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
CACNA1A-248ENST00000637774 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
CACNA1A-248ENST00000637774 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-248ENST00000637774 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
CACNA1A-248ENST00000637774 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
CACNA1A-248ENST00000637774 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-248ENST00000637774 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
CACNA1A-248ENST00000637774 FHOD3Q2V2M9 1422 aa14.31□□□□□ -0.12
CACNA1A-248ENST00000637774 ERCC6Q03468 1493 aa14.3□□□□□ -0.12
CACNA1A-248ENST00000637774 ARHGAP35Q9NRY4 1499 aa14.3□□□□□ -0.12
CACNA1A-248ENST00000637774 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-248ENST00000637774 DNMBPQ6XZF7 1577 aa14.27□□□□□ -0.13
CACNA1A-248ENST00000637774 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.13
CACNA1A-248ENST00000637774 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
CACNA1A-248ENST00000637774 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms