RNA–Protein interactions for RNA: ENST00000637554.1

LINC01876-207, Transcript of long intergenic non-protein coding RNA 1876, humanhuman

TSL 5

Gene LINC01876, Length 563 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01876-207ENST00000637554 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
LINC01876-207ENST00000637554 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
LINC01876-207ENST00000637554 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
LINC01876-207ENST00000637554 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
LINC01876-207ENST00000637554 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
LINC01876-207ENST00000637554 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
LINC01876-207ENST00000637554 FOXD1Q16676 465 aa16.42■□□□□ 0.22
LINC01876-207ENST00000637554 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
LINC01876-207ENST00000637554 ABCC9O60706 1549 aa15.98■□□□□ 0.15
LINC01876-207ENST00000637554 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
LINC01876-207ENST00000637554 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
LINC01876-207ENST00000637554 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.11
LINC01876-207ENST00000637554 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
LINC01876-207ENST00000637554 ADRA2BP18089 450 aa15.65■□□□□ 0.1
LINC01876-207ENST00000637554 NACADO15069 1562 aa15.65■□□□□ 0.1
LINC01876-207ENST00000637554 DCAF8L2P0C7V8 631 aa15.64■□□□□ 0.09
LINC01876-207ENST00000637554 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
LINC01876-207ENST00000637554 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
LINC01876-207ENST00000637554 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
LINC01876-207ENST00000637554 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
LINC01876-207ENST00000637554 MSH5O43196 834 aa15.15■□□□□ 0.02
LINC01876-207ENST00000637554 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
LINC01876-207ENST00000637554 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
LINC01876-207ENST00000637554 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
LINC01876-207ENST00000637554 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
LINC01876-207ENST00000637554 BAZ1AQ9NRL2 1556 aaPredicted RBP14.72□□□□□ -0.05
LINC01876-207ENST00000637554 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
LINC01876-207ENST00000637554 MROH2BQ7Z745 1585 aa14.69□□□□□ -0.06
LINC01876-207ENST00000637554 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
LINC01876-207ENST00000637554 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
LINC01876-207ENST00000637554 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.08
LINC01876-207ENST00000637554 ATAD2BQ9ULI0 1458 aa14.54□□□□□ -0.08
LINC01876-207ENST00000637554 SUPT5HO00267 1087 aaKnown RBP14.51□□□□□ -0.09
LINC01876-207ENST00000637554 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
LINC01876-207ENST00000637554 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
LINC01876-207ENST00000637554 WIZO95785 1651 aa14.48□□□□□ -0.09
LINC01876-207ENST00000637554 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
LINC01876-207ENST00000637554 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
LINC01876-207ENST00000637554 DNAJC5BQ9UF47 199 aa14.41□□□□□ -0.1
LINC01876-207ENST00000637554 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
LINC01876-207ENST00000637554 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
LINC01876-207ENST00000637554 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
LINC01876-207ENST00000637554 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
LINC01876-207ENST00000637554 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
LINC01876-207ENST00000637554 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
LINC01876-207ENST00000637554 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
LINC01876-207ENST00000637554 CFTRP13569 1480 aa14.08□□□□□ -0.16
LINC01876-207ENST00000637554 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
LINC01876-207ENST00000637554 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
LINC01876-207ENST00000637554 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
LINC01876-207ENST00000637554 NESP48681 1621 aa13.97□□□□□ -0.17
LINC01876-207ENST00000637554 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
LINC01876-207ENST00000637554 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
LINC01876-207ENST00000637554 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
LINC01876-207ENST00000637554 PRDM2Q13029 1718 aa13.83□□□□□ -0.2
LINC01876-207ENST00000637554 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
LINC01876-207ENST00000637554 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
LINC01876-207ENST00000637554 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
LINC01876-207ENST00000637554 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
LINC01876-207ENST00000637554 CUX1P39880 1505 aa13.75□□□□□ -0.21
LINC01876-207ENST00000637554 KCNA4P22459 653 aa13.74□□□□□ -0.21
LINC01876-207ENST00000637554 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
LINC01876-207ENST00000637554 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
LINC01876-207ENST00000637554 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
LINC01876-207ENST00000637554 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
LINC01876-207ENST00000637554 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
LINC01876-207ENST00000637554 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
LINC01876-207ENST00000637554 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
LINC01876-207ENST00000637554 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
LINC01876-207ENST00000637554 DNMBPQ6XZF7 1577 aa13.7□□□□□ -0.22
LINC01876-207ENST00000637554 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
LINC01876-207ENST00000637554 WDR62O43379 1518 aa13.67□□□□□ -0.22
LINC01876-207ENST00000637554 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
LINC01876-207ENST00000637554 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
LINC01876-207ENST00000637554 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
LINC01876-207ENST00000637554 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
LINC01876-207ENST00000637554 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
LINC01876-207ENST00000637554 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
LINC01876-207ENST00000637554 CUX2O14529 1486 aa13.59□□□□□ -0.23
LINC01876-207ENST00000637554 SOGA1O94964 1423 aa13.56□□□□□ -0.24
LINC01876-207ENST00000637554 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
LINC01876-207ENST00000637554 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
LINC01876-207ENST00000637554 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
LINC01876-207ENST00000637554 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
LINC01876-207ENST00000637554 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
LINC01876-207ENST00000637554 EEA1Q15075 1411 aa13.49□□□□□ -0.25
LINC01876-207ENST00000637554 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
LINC01876-207ENST00000637554 KIF27Q86VH2 1401 aa13.47□□□□□ -0.25
LINC01876-207ENST00000637554 WDR97A6NE52 1622 aa13.46□□□□□ -0.25
LINC01876-207ENST00000637554 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
LINC01876-207ENST00000637554 ZNF608Q9ULD9 1512 aaPredicted RBP13.43□□□□□ -0.26
LINC01876-207ENST00000637554 IGF1RP08069 1367 aa13.43□□□□□ -0.26
LINC01876-207ENST00000637554 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
LINC01876-207ENST00000637554 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
LINC01876-207ENST00000637554 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC01876-207ENST00000637554 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
LINC01876-207ENST00000637554 PRXQ9BXM0 1461 aa13.37□□□□□ -0.27
LINC01876-207ENST00000637554 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
LINC01876-207ENST00000637554 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
LINC01876-207ENST00000637554 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms