RNA–Protein interactions for RNA: ENST00000637007.1

CACNB4-240, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 858 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-240ENST00000637007 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
CACNB4-240ENST00000637007 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
CACNB4-240ENST00000637007 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
CACNB4-240ENST00000637007 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.72
CACNB4-240ENST00000637007 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
CACNB4-240ENST00000637007 FOXD1Q16676 465 aa18.45■□□□□ 0.54
CACNB4-240ENST00000637007 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
CACNB4-240ENST00000637007 MSH5O43196 834 aa17.63■□□□□ 0.41
CACNB4-240ENST00000637007 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
CACNB4-240ENST00000637007 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
CACNB4-240ENST00000637007 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
CACNB4-240ENST00000637007 ADRA2BP18089 450 aa16.53■□□□□ 0.24
CACNB4-240ENST00000637007 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
CACNB4-240ENST00000637007 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
CACNB4-240ENST00000637007 ABCC9O60706 1549 aa16.33■□□□□ 0.2
CACNB4-240ENST00000637007 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
CACNB4-240ENST00000637007 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
CACNB4-240ENST00000637007 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
CACNB4-240ENST00000637007 NACADO15069 1562 aa16.05■□□□□ 0.16
CACNB4-240ENST00000637007 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
CACNB4-240ENST00000637007 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
CACNB4-240ENST00000637007 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
CACNB4-240ENST00000637007 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
CACNB4-240ENST00000637007 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
CACNB4-240ENST00000637007 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
CACNB4-240ENST00000637007 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
CACNB4-240ENST00000637007 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
CACNB4-240ENST00000637007 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
CACNB4-240ENST00000637007 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
CACNB4-240ENST00000637007 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
CACNB4-240ENST00000637007 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
CACNB4-240ENST00000637007 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
CACNB4-240ENST00000637007 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
CACNB4-240ENST00000637007 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
CACNB4-240ENST00000637007 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
CACNB4-240ENST00000637007 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
CACNB4-240ENST00000637007 WIZO95785 1651 aa14.95□□□□□ -0.02
CACNB4-240ENST00000637007 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
CACNB4-240ENST00000637007 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
CACNB4-240ENST00000637007 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
CACNB4-240ENST00000637007 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
CACNB4-240ENST00000637007 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.03
CACNB4-240ENST00000637007 TOP2AP11388 1531 aaKnown RBP14.83□□□□□ -0.04
CACNB4-240ENST00000637007 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
CACNB4-240ENST00000637007 HMGXB3Q12766 1538 aa14.78□□□□□ -0.04
CACNB4-240ENST00000637007 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
CACNB4-240ENST00000637007 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
CACNB4-240ENST00000637007 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
CACNB4-240ENST00000637007 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
CACNB4-240ENST00000637007 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
CACNB4-240ENST00000637007 PRDM2Q13029 1718 aa14.46□□□□□ -0.09
CACNB4-240ENST00000637007 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
CACNB4-240ENST00000637007 CFTRP13569 1480 aa14.37□□□□□ -0.11
CACNB4-240ENST00000637007 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
CACNB4-240ENST00000637007 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
CACNB4-240ENST00000637007 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
CACNB4-240ENST00000637007 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
CACNB4-240ENST00000637007 POTEHQ6S545 545 aa14.31□□□□□ -0.12
CACNB4-240ENST00000637007 CNKSR2Q8WXI2 1034 aa14.29□□□□□ -0.12
CACNB4-240ENST00000637007 NESP48681 1621 aa14.26□□□□□ -0.13
CACNB4-240ENST00000637007 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
CACNB4-240ENST00000637007 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
CACNB4-240ENST00000637007 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
CACNB4-240ENST00000637007 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
CACNB4-240ENST00000637007 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
CACNB4-240ENST00000637007 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
CACNB4-240ENST00000637007 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
CACNB4-240ENST00000637007 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
CACNB4-240ENST00000637007 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
CACNB4-240ENST00000637007 TOP2BQ02880 1626 aa14.14□□□□□ -0.15
CACNB4-240ENST00000637007 CUX1P39880 1505 aa14.1□□□□□ -0.15
CACNB4-240ENST00000637007 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
CACNB4-240ENST00000637007 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
CACNB4-240ENST00000637007 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
CACNB4-240ENST00000637007 TOPBP1Q92547 1522 aa14.04□□□□□ -0.16
CACNB4-240ENST00000637007 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
CACNB4-240ENST00000637007 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
CACNB4-240ENST00000637007 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
CACNB4-240ENST00000637007 WDR62O43379 1518 aa13.99□□□□□ -0.17
CACNB4-240ENST00000637007 POLA1P09884 1462 aaPredicted RBP13.94□□□□□ -0.18
CACNB4-240ENST00000637007 EEA1Q15075 1411 aa13.94□□□□□ -0.18
CACNB4-240ENST00000637007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■□ 21.9
CACNB4-240ENST00000637007 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
CACNB4-240ENST00000637007 SOGA1O94964 1423 aa13.89□□□□□ -0.19
CACNB4-240ENST00000637007 ABCA10Q8WWZ4 1543 aa13.88□□□□□ -0.19
CACNB4-240ENST00000637007 KIF27Q86VH2 1401 aa13.87□□□□□ -0.19
CACNB4-240ENST00000637007 CUX2O14529 1486 aa13.87□□□□□ -0.19
CACNB4-240ENST00000637007 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
CACNB4-240ENST00000637007 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
CACNB4-240ENST00000637007 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
CACNB4-240ENST00000637007 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
CACNB4-240ENST00000637007 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.2
CACNB4-240ENST00000637007 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
CACNB4-240ENST00000637007 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
CACNB4-240ENST00000637007 KIF21BO75037 1637 aa13.78□□□□□ -0.2
CACNB4-240ENST00000637007 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
CACNB4-240ENST00000637007 CUL7Q14999 1698 aa13.75□□□□□ -0.21
CACNB4-240ENST00000637007 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
CACNB4-240ENST00000637007 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
CACNB4-240ENST00000637007 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms