RNA–Protein interactions for RNA: ENST00000636956.1

LINC01876-204, Transcript of long intergenic non-protein coding RNA 1876, humanhuman

TSL 5

Gene LINC01876, Length 705 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01876-204ENST00000636956 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
LINC01876-204ENST00000636956 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
LINC01876-204ENST00000636956 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
LINC01876-204ENST00000636956 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
LINC01876-204ENST00000636956 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
LINC01876-204ENST00000636956 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
LINC01876-204ENST00000636956 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
LINC01876-204ENST00000636956 FOXD1Q16676 465 aa19.71■□□□□ 0.75
LINC01876-204ENST00000636956 ABCC9O60706 1549 aa19.29■□□□□ 0.68
LINC01876-204ENST00000636956 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
LINC01876-204ENST00000636956 ADRA2BP18089 450 aa18.96■□□□□ 0.63
LINC01876-204ENST00000636956 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
LINC01876-204ENST00000636956 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
LINC01876-204ENST00000636956 NACADO15069 1562 aa18.61■□□□□ 0.57
LINC01876-204ENST00000636956 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
LINC01876-204ENST00000636956 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
LINC01876-204ENST00000636956 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.56
LINC01876-204ENST00000636956 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
LINC01876-204ENST00000636956 MSH5O43196 834 aa18.18■□□□□ 0.5
LINC01876-204ENST00000636956 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.49
LINC01876-204ENST00000636956 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
LINC01876-204ENST00000636956 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC01876-204ENST00000636956 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
LINC01876-204ENST00000636956 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
LINC01876-204ENST00000636956 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
LINC01876-204ENST00000636956 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
LINC01876-204ENST00000636956 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
LINC01876-204ENST00000636956 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
LINC01876-204ENST00000636956 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
LINC01876-204ENST00000636956 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
LINC01876-204ENST00000636956 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
LINC01876-204ENST00000636956 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
LINC01876-204ENST00000636956 KCNA4P22459 653 aa17.2■□□□□ 0.34
LINC01876-204ENST00000636956 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
LINC01876-204ENST00000636956 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
LINC01876-204ENST00000636956 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
LINC01876-204ENST00000636956 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
LINC01876-204ENST00000636956 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
LINC01876-204ENST00000636956 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
LINC01876-204ENST00000636956 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
LINC01876-204ENST00000636956 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
LINC01876-204ENST00000636956 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
LINC01876-204ENST00000636956 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
LINC01876-204ENST00000636956 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
LINC01876-204ENST00000636956 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
LINC01876-204ENST00000636956 WIZO95785 1651 aa16.98■□□□□ 0.31
LINC01876-204ENST00000636956 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
LINC01876-204ENST00000636956 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
LINC01876-204ENST00000636956 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
LINC01876-204ENST00000636956 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
LINC01876-204ENST00000636956 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
LINC01876-204ENST00000636956 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
LINC01876-204ENST00000636956 NESP48681 1621 aa16.69■□□□□ 0.26
LINC01876-204ENST00000636956 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
LINC01876-204ENST00000636956 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
LINC01876-204ENST00000636956 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
LINC01876-204ENST00000636956 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
LINC01876-204ENST00000636956 CFTRP13569 1480 aa16.58■□□□□ 0.24
LINC01876-204ENST00000636956 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
LINC01876-204ENST00000636956 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
LINC01876-204ENST00000636956 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
LINC01876-204ENST00000636956 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
LINC01876-204ENST00000636956 CUX2O14529 1486 aa16.44■□□□□ 0.22
LINC01876-204ENST00000636956 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
LINC01876-204ENST00000636956 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
LINC01876-204ENST00000636956 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
LINC01876-204ENST00000636956 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
LINC01876-204ENST00000636956 WDR62O43379 1518 aa16.34■□□□□ 0.21
LINC01876-204ENST00000636956 ABCC8Q09428 1581 aa16.27■□□□□ 0.2
LINC01876-204ENST00000636956 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
LINC01876-204ENST00000636956 TOPBP1Q92547 1522 aa16.21■□□□□ 0.19
LINC01876-204ENST00000636956 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
LINC01876-204ENST00000636956 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
LINC01876-204ENST00000636956 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
LINC01876-204ENST00000636956 CUX1P39880 1505 aa16.09■□□□□ 0.17
LINC01876-204ENST00000636956 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
LINC01876-204ENST00000636956 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
LINC01876-204ENST00000636956 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
LINC01876-204ENST00000636956 SOGA1O94964 1423 aa16.04■□□□□ 0.16
LINC01876-204ENST00000636956 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
LINC01876-204ENST00000636956 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
LINC01876-204ENST00000636956 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
LINC01876-204ENST00000636956 BIVM-ERCC5R4GMW8 1640 aa15.99■□□□□ 0.15
LINC01876-204ENST00000636956 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
LINC01876-204ENST00000636956 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
LINC01876-204ENST00000636956 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
LINC01876-204ENST00000636956 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
LINC01876-204ENST00000636956 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
LINC01876-204ENST00000636956 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC01876-204ENST00000636956 TDRD9Q8NDG6 1382 aaKnown RBP15.92■□□□□ 0.14
LINC01876-204ENST00000636956 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
LINC01876-204ENST00000636956 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
LINC01876-204ENST00000636956 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
LINC01876-204ENST00000636956 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
LINC01876-204ENST00000636956 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
LINC01876-204ENST00000636956 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
LINC01876-204ENST00000636956 ZBTB22O15209 634 aa15.83■□□□□ 0.12
LINC01876-204ENST00000636956 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
LINC01876-204ENST00000636956 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
LINC01876-204ENST00000636956 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms