RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 NISCHQ9Y2I1 1504 aa39.77■■■■□ 3.96
CLN5-216ENST00000636780 SHROOM4Q9ULL8 1493 aa34.35■■■■□ 3.09
CLN5-216ENST00000636780 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
CLN5-216ENST00000636780 CCDC180Q9P1Z9 1646 aa33.59■■■□□ 2.97
CLN5-216ENST00000636780 SUPT5HO00267 1087 aaKnown RBP33.51■■■□□ 2.96
CLN5-216ENST00000636780 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
CLN5-216ENST00000636780 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
CLN5-216ENST00000636780 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
CLN5-216ENST00000636780 ABCC9O60706 1549 aa32.11■■■□□ 2.73
CLN5-216ENST00000636780 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
CLN5-216ENST00000636780 SCRIBQ14160 1630 aa31.98■■■□□ 2.71
CLN5-216ENST00000636780 LOC105371045A0A1W2PR82 267 aa31.51■■■□□ 2.63
CLN5-216ENST00000636780 RSF1Q96T23 1441 aaPredicted RBP31.5■■■□□ 2.63
CLN5-216ENST00000636780 CECR2Q9BXF3 1484 aa31.35■■■□□ 2.61
CLN5-216ENST00000636780 NACADO15069 1562 aa31.28■■■□□ 2.6
CLN5-216ENST00000636780 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
CLN5-216ENST00000636780 EHMT2Q96KQ7 1210 aa31.12■■■□□ 2.57
CLN5-216ENST00000636780 FAM9AQ8IZU1 332 aaPredicted RBP31.1■■■□□ 2.57
CLN5-216ENST00000636780 MROH2BQ7Z745 1585 aa31.08■■■□□ 2.57
CLN5-216ENST00000636780 PCGF6Q9BYE7 350 aa31.04■■■□□ 2.56
CLN5-216ENST00000636780 TRIM41Q8WV44 630 aa31.01■■■□□ 2.55
CLN5-216ENST00000636780 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
CLN5-216ENST00000636780 WIZO95785 1651 aa30.89■■■□□ 2.53
CLN5-216ENST00000636780 UNC13AQ9UPW8 1703 aa30.52■■■□□ 2.48
CLN5-216ENST00000636780 HRCP23327 699 aa30.51■■■□□ 2.48
CLN5-216ENST00000636780 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
CLN5-216ENST00000636780 PPARGC1BQ86YN6 1023 aaKnown RBP30.41■■■□□ 2.46
CLN5-216ENST00000636780 SMARCA4P51532 1647 aa30.31■■■□□ 2.44
CLN5-216ENST00000636780 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.43
CLN5-216ENST00000636780 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
CLN5-216ENST00000636780 ABCC8Q09428 1581 aa30.21■■■□□ 2.43
CLN5-216ENST00000636780 TRIM26Q12899 539 aaPredicted RBP30.19■■■□□ 2.42
CLN5-216ENST00000636780 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
CLN5-216ENST00000636780 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
CLN5-216ENST00000636780 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
CLN5-216ENST00000636780 TTBK1Q5TCY1 1321 aaPredicted RBP29.95■■■□□ 2.38
CLN5-216ENST00000636780 SOGA1O94964 1423 aa29.9■■■□□ 2.38
CLN5-216ENST00000636780 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
CLN5-216ENST00000636780 ATAD2BQ9ULI0 1458 aa29.73■■■□□ 2.35
CLN5-216ENST00000636780 UBTFP17480 764 aaKnown RBP29.67■■■□□ 2.34
CLN5-216ENST00000636780 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
CLN5-216ENST00000636780 CSRNP3Q8WYN3 585 aa29.62■■■□□ 2.33
CLN5-216ENST00000636780 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
CLN5-216ENST00000636780 RANGAP1P46060 587 aaPredicted RBP29.56■■■□□ 2.32
CLN5-216ENST00000636780 PEG3Q9GZU2 1588 aa29.54■■■□□ 2.32
CLN5-216ENST00000636780 CEP162Q5TB80 1403 aa29.45■■■□□ 2.31
CLN5-216ENST00000636780 SYNJ1O43426 1573 aa29.44■■■□□ 2.3
CLN5-216ENST00000636780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.42■■■□□ 2.3
CLN5-216ENST00000636780 TNIKQ9UKE5 1360 aa29.3■■■□□ 2.28
CLN5-216ENST00000636780 EEA1Q15075 1411 aa29.17■■■□□ 2.26
CLN5-216ENST00000636780 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
CLN5-216ENST00000636780 CCER1Q8TC90 406 aaPredicted RBP29.15■■■□□ 2.26
CLN5-216ENST00000636780 ZEB1P37275 1124 aaPredicted RBP29.12■■■□□ 2.25
CLN5-216ENST00000636780 RAPGEF2Q9Y4G8 1499 aa29.1■■■□□ 2.25
CLN5-216ENST00000636780 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
CLN5-216ENST00000636780 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.23
CLN5-216ENST00000636780 CLIP1P30622 1438 aa28.97■■■□□ 2.23
CLN5-216ENST00000636780 HNRNPUL2Q1KMD3 747 aaKnown RBP28.93■■■□□ 2.22
CLN5-216ENST00000636780 TOP2BQ02880 1626 aa28.92■■■□□ 2.22
CLN5-216ENST00000636780 HMGXB3Q12766 1538 aa28.9■■■□□ 2.22
CLN5-216ENST00000636780 CUX1P39880 1505 aa28.9■■■□□ 2.22
CLN5-216ENST00000636780 KIF21BO75037 1637 aa28.83■■■□□ 2.21
CLN5-216ENST00000636780 CFTRP13569 1480 aa28.81■■■□□ 2.2
CLN5-216ENST00000636780 APLP2Q06481 763 aa28.75■■■□□ 2.19
CLN5-216ENST00000636780 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
CLN5-216ENST00000636780 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
CLN5-216ENST00000636780 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
CLN5-216ENST00000636780 CC2D2AQ9P2K1 1620 aa28.67■■■□□ 2.18
CLN5-216ENST00000636780 CADPSQ9ULU8 1353 aa28.65■■■□□ 2.18
CLN5-216ENST00000636780 PRXQ9BXM0 1461 aa28.64■■■□□ 2.18
CLN5-216ENST00000636780 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.17
CLN5-216ENST00000636780 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
CLN5-216ENST00000636780 CUX2O14529 1486 aa28.56■■■□□ 2.16
CLN5-216ENST00000636780 NESP48681 1621 aa28.53■■■□□ 2.16
CLN5-216ENST00000636780 ARAP1Q96P48 1450 aa28.51■■■□□ 2.15
CLN5-216ENST00000636780 P3H3Q8IVL6 736 aa28.5■■■□□ 2.15
CLN5-216ENST00000636780 IGF1RP08069 1367 aa28.49■■■□□ 2.15
CLN5-216ENST00000636780 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
CLN5-216ENST00000636780 ITGAEP38570 1179 aa28.41■■■□□ 2.14
CLN5-216ENST00000636780 ERICH3Q5RHP9 1530 aa28.41■■■□□ 2.14
CLN5-216ENST00000636780 FANCD2Q9BXW9 1451 aa28.39■■■□□ 2.14
CLN5-216ENST00000636780 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.14
CLN5-216ENST00000636780 ATP1B4Q9UN42 357 aaPredicted RBP28.36■■■□□ 2.13
CLN5-216ENST00000636780 CARMIL1Q5VZK9 1371 aa28.35■■■□□ 2.13
CLN5-216ENST00000636780 ARHGAP35Q9NRY4 1499 aa28.34■■■□□ 2.13
CLN5-216ENST00000636780 DIEXFQ68CQ4 756 aaKnown RBP28.32■■■□□ 2.12
CLN5-216ENST00000636780 PRDM2Q13029 1718 aa28.21■■■□□ 2.11
CLN5-216ENST00000636780 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.1
CLN5-216ENST00000636780 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.09
CLN5-216ENST00000636780 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
CLN5-216ENST00000636780 ZNF316A6NFI3 1004 aaPredicted RBP28.12■■■□□ 2.09
CLN5-216ENST00000636780 SCAF1Q9H7N4 1312 aaKnown RBP28.08■■■□□ 2.09
CLN5-216ENST00000636780 FHOD3Q2V2M9 1422 aa28.03■■■□□ 2.08
CLN5-216ENST00000636780 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
CLN5-216ENST00000636780 DNMBPQ6XZF7 1577 aa28.01■■■□□ 2.07
CLN5-216ENST00000636780 FAM50AQ14320 339 aaKnown RBP27.98■■■□□ 2.07
CLN5-216ENST00000636780 CCNB3Q8WWL7 1395 aa27.98■■■□□ 2.07
CLN5-216ENST00000636780 NEUROD1Q13562 356 aa27.97■■■□□ 2.07
CLN5-216ENST00000636780 DHX57Q6P158 1386 aaKnown RBP27.97■■■□□ 2.07
CLN5-216ENST00000636780 YTHDC1Q96MU7 727 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms