RNA–Protein interactions for RNA: ENST00000636664.1

CACNB4-230, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 1,698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-230ENST00000636664 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
CACNB4-230ENST00000636664 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
CACNB4-230ENST00000636664 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
CACNB4-230ENST00000636664 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
CACNB4-230ENST00000636664 ABCC9O60706 1549 aa15.75■□□□□ 0.11
CACNB4-230ENST00000636664 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
CACNB4-230ENST00000636664 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
CACNB4-230ENST00000636664 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
CACNB4-230ENST00000636664 NACADO15069 1562 aa14.92□□□□□ -0.02
CACNB4-230ENST00000636664 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
CACNB4-230ENST00000636664 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.04
CACNB4-230ENST00000636664 SENP3Q9H4L4 574 aaPredicted RBP14.74□□□□□ -0.05
CACNB4-230ENST00000636664 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
CACNB4-230ENST00000636664 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
CACNB4-230ENST00000636664 UNC13AQ9UPW8 1703 aa14.68□□□□□ -0.06
CACNB4-230ENST00000636664 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
CACNB4-230ENST00000636664 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
CACNB4-230ENST00000636664 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
CACNB4-230ENST00000636664 SHROOM4Q9ULL8 1493 aa14.33□□□□□ -0.12
CACNB4-230ENST00000636664 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
CACNB4-230ENST00000636664 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
CACNB4-230ENST00000636664 HRCP23327 699 aa14.17□□□□□ -0.14
CACNB4-230ENST00000636664 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
CACNB4-230ENST00000636664 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
CACNB4-230ENST00000636664 SMARCA4P51532 1647 aa13.83□□□□□ -0.2
CACNB4-230ENST00000636664 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
CACNB4-230ENST00000636664 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
CACNB4-230ENST00000636664 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
CACNB4-230ENST00000636664 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
CACNB4-230ENST00000636664 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
CACNB4-230ENST00000636664 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
CACNB4-230ENST00000636664 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
CACNB4-230ENST00000636664 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
CACNB4-230ENST00000636664 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
CACNB4-230ENST00000636664 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
CACNB4-230ENST00000636664 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
CACNB4-230ENST00000636664 FOXD1Q16676 465 aa13.65□□□□□ -0.22
CACNB4-230ENST00000636664 NESP48681 1621 aa13.61□□□□□ -0.23
CACNB4-230ENST00000636664 WIZO95785 1651 aa13.57□□□□□ -0.24
CACNB4-230ENST00000636664 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
CACNB4-230ENST00000636664 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
CACNB4-230ENST00000636664 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
CACNB4-230ENST00000636664 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
CACNB4-230ENST00000636664 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
CACNB4-230ENST00000636664 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
CACNB4-230ENST00000636664 CUX2O14529 1486 aa13.43□□□□□ -0.26
CACNB4-230ENST00000636664 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
CACNB4-230ENST00000636664 KIF21AQ7Z4S6 1674 aa13.38□□□□□ -0.27
CACNB4-230ENST00000636664 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
CACNB4-230ENST00000636664 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
CACNB4-230ENST00000636664 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
CACNB4-230ENST00000636664 MYT1Q01538 1121 aa13.35□□□□□ -0.27
CACNB4-230ENST00000636664 CFTRP13569 1480 aa13.3□□□□□ -0.28
CACNB4-230ENST00000636664 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
CACNB4-230ENST00000636664 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
CACNB4-230ENST00000636664 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
CACNB4-230ENST00000636664 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
CACNB4-230ENST00000636664 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
CACNB4-230ENST00000636664 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
CACNB4-230ENST00000636664 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
CACNB4-230ENST00000636664 WDR62O43379 1518 aa13.23□□□□□ -0.29
CACNB4-230ENST00000636664 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
CACNB4-230ENST00000636664 ADRA2BP18089 450 aa13.15□□□□□ -0.3
CACNB4-230ENST00000636664 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
CACNB4-230ENST00000636664 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
CACNB4-230ENST00000636664 ACIN1Q9UKV3 1341 aaKnown RBP13.05□□□□□ -0.32
CACNB4-230ENST00000636664 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
CACNB4-230ENST00000636664 ZNF608Q9ULD9 1512 aaPredicted RBP13□□□□□ -0.33
CACNB4-230ENST00000636664 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
CACNB4-230ENST00000636664 IFT140Q96RY7 1462 aa12.96□□□□□ -0.33
CACNB4-230ENST00000636664 ABCC8Q09428 1581 aa12.93□□□□□ -0.34
CACNB4-230ENST00000636664 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
CACNB4-230ENST00000636664 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
CACNB4-230ENST00000636664 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
CACNB4-230ENST00000636664 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
CACNB4-230ENST00000636664 RAD54L2Q9Y4B4 1467 aa12.9□□□□□ -0.34
CACNB4-230ENST00000636664 CUX1P39880 1505 aa12.89□□□□□ -0.35
CACNB4-230ENST00000636664 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNB4-230ENST00000636664 NEUROD1Q13562 356 aa12.89□□□□□ -0.35
CACNB4-230ENST00000636664 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
CACNB4-230ENST00000636664 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
CACNB4-230ENST00000636664 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
CACNB4-230ENST00000636664 FGD5Q6ZNL6 1462 aa12.86□□□□□ -0.35
CACNB4-230ENST00000636664 SOGA1O94964 1423 aa12.84□□□□□ -0.35
CACNB4-230ENST00000636664 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
CACNB4-230ENST00000636664 WRNQ14191 1432 aaPredicted RBP eCLIP12.8□□□□□ -0.36
CACNB4-230ENST00000636664 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
CACNB4-230ENST00000636664 DIEXFQ68CQ4 756 aaKnown RBP12.79□□□□□ -0.36
CACNB4-230ENST00000636664 CHD1O14646 1710 aa12.74□□□□□ -0.37
CACNB4-230ENST00000636664 FBLN2P98095 1184 aa12.74□□□□□ -0.37
CACNB4-230ENST00000636664 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
CACNB4-230ENST00000636664 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
CACNB4-230ENST00000636664 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
CACNB4-230ENST00000636664 SYNJ1O43426 1573 aa12.73□□□□□ -0.37
CACNB4-230ENST00000636664 RIMBP3CA6NJZ7 1639 aa12.7□□□□□ -0.38
CACNB4-230ENST00000636664 RIMBP3BA6NNM3 1639 aa12.7□□□□□ -0.38
CACNB4-230ENST00000636664 RIMBP3Q9UFD9 1639 aa12.7□□□□□ -0.38
CACNB4-230ENST00000636664 ABCA10Q8WWZ4 1543 aa12.7□□□□□ -0.38
CACNB4-230ENST00000636664 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
CACNB4-230ENST00000636664 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 310.4 ms