RNA–Protein interactions for RNA: ENST00000636229.1

CCDC196-207, Transcript of coiled-coil domain containing 196, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC196, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-207ENST00000636229 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
CCDC196-207ENST00000636229 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
CCDC196-207ENST00000636229 NISCHQ9Y2I1 1504 aa20.87■□□□□ 0.93
CCDC196-207ENST00000636229 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
CCDC196-207ENST00000636229 ABCC9O60706 1549 aa19.93■□□□□ 0.78
CCDC196-207ENST00000636229 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
CCDC196-207ENST00000636229 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
CCDC196-207ENST00000636229 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
CCDC196-207ENST00000636229 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
CCDC196-207ENST00000636229 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
CCDC196-207ENST00000636229 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
CCDC196-207ENST00000636229 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCDC196-207ENST00000636229 FOXD1Q16676 465 aa18.32■□□□□ 0.52
CCDC196-207ENST00000636229 NACADO15069 1562 aa18.22■□□□□ 0.51
CCDC196-207ENST00000636229 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
CCDC196-207ENST00000636229 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
CCDC196-207ENST00000636229 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
CCDC196-207ENST00000636229 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
CCDC196-207ENST00000636229 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
CCDC196-207ENST00000636229 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
CCDC196-207ENST00000636229 ADRA2BP18089 450 aa17.77■□□□□ 0.44
CCDC196-207ENST00000636229 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
CCDC196-207ENST00000636229 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
CCDC196-207ENST00000636229 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
CCDC196-207ENST00000636229 CUX2O14529 1486 aa17.48■□□□□ 0.39
CCDC196-207ENST00000636229 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
CCDC196-207ENST00000636229 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
CCDC196-207ENST00000636229 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
CCDC196-207ENST00000636229 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
CCDC196-207ENST00000636229 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
CCDC196-207ENST00000636229 ZCCHC6Q5VYS8 1495 aaKnown RBP17.08■□□□□ 0.32
CCDC196-207ENST00000636229 NESP48681 1621 aa16.9■□□□□ 0.3
CCDC196-207ENST00000636229 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
CCDC196-207ENST00000636229 THOC2Q8NI27 1593 aaKnown RBP16.84■□□□□ 0.29
CCDC196-207ENST00000636229 MSH5O43196 834 aa16.74■□□□□ 0.27
CCDC196-207ENST00000636229 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
CCDC196-207ENST00000636229 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
CCDC196-207ENST00000636229 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
CCDC196-207ENST00000636229 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
CCDC196-207ENST00000636229 KIF21AQ7Z4S6 1674 aa16.61■□□□□ 0.25
CCDC196-207ENST00000636229 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
CCDC196-207ENST00000636229 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
CCDC196-207ENST00000636229 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
CCDC196-207ENST00000636229 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
CCDC196-207ENST00000636229 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
CCDC196-207ENST00000636229 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
CCDC196-207ENST00000636229 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
CCDC196-207ENST00000636229 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
CCDC196-207ENST00000636229 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
CCDC196-207ENST00000636229 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
CCDC196-207ENST00000636229 WDR62O43379 1518 aa16.41■□□□□ 0.22
CCDC196-207ENST00000636229 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
CCDC196-207ENST00000636229 KCNA4P22459 653 aa16.33■□□□□ 0.2
CCDC196-207ENST00000636229 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
CCDC196-207ENST00000636229 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
CCDC196-207ENST00000636229 CYB5RLQ6IPT4 315 aa16.3■□□□□ 0.2
CCDC196-207ENST00000636229 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
CCDC196-207ENST00000636229 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
CCDC196-207ENST00000636229 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
CCDC196-207ENST00000636229 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
CCDC196-207ENST00000636229 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
CCDC196-207ENST00000636229 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
CCDC196-207ENST00000636229 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
CCDC196-207ENST00000636229 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
CCDC196-207ENST00000636229 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
CCDC196-207ENST00000636229 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
CCDC196-207ENST00000636229 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
CCDC196-207ENST00000636229 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
CCDC196-207ENST00000636229 CFTRP13569 1480 aa15.95■□□□□ 0.14
CCDC196-207ENST00000636229 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
CCDC196-207ENST00000636229 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
CCDC196-207ENST00000636229 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
CCDC196-207ENST00000636229 CHD1O14646 1710 aa15.88■□□□□ 0.13
CCDC196-207ENST00000636229 WIZO95785 1651 aa15.85■□□□□ 0.13
CCDC196-207ENST00000636229 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CCDC196-207ENST00000636229 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
CCDC196-207ENST00000636229 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
CCDC196-207ENST00000636229 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.11
CCDC196-207ENST00000636229 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
CCDC196-207ENST00000636229 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
CCDC196-207ENST00000636229 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
CCDC196-207ENST00000636229 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
CCDC196-207ENST00000636229 RNF216Q9NWF9 866 aaPredicted RBP15.61■□□□□ 0.09
CCDC196-207ENST00000636229 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
CCDC196-207ENST00000636229 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
CCDC196-207ENST00000636229 KDM4FA0A1W2PPD8 638 aa15.59■□□□□ 0.09
CCDC196-207ENST00000636229 CHMP7Q8WUX9 453 aaPredicted RBP15.57■□□□□ 0.08
CCDC196-207ENST00000636229 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
CCDC196-207ENST00000636229 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
CCDC196-207ENST00000636229 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
CCDC196-207ENST00000636229 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
CCDC196-207ENST00000636229 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
CCDC196-207ENST00000636229 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
CCDC196-207ENST00000636229 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
CCDC196-207ENST00000636229 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
CCDC196-207ENST00000636229 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
CCDC196-207ENST00000636229 KIF13AQ9H1H9 1805 aa15.49■□□□□ 0.07
CCDC196-207ENST00000636229 MAGI1Q96QZ7 1491 aaPredicted RBP15.45■□□□□ 0.06
CCDC196-207ENST00000636229 SOGA1O94964 1423 aa15.44■□□□□ 0.06
CCDC196-207ENST00000636229 CCDC88BA6NC98 1476 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms