RNA–Protein interactions for RNA: ENST00000636108.1

CACNB4-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5 BASIC

Gene CACNB4, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-219ENST00000636108 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
CACNB4-219ENST00000636108 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
CACNB4-219ENST00000636108 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
CACNB4-219ENST00000636108 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
CACNB4-219ENST00000636108 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
CACNB4-219ENST00000636108 FOXD1Q16676 465 aa15.55■□□□□ 0.08
CACNB4-219ENST00000636108 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
CACNB4-219ENST00000636108 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
CACNB4-219ENST00000636108 MSH5O43196 834 aa14.92□□□□□ -0.02
CACNB4-219ENST00000636108 ABCC9O60706 1549 aa14.87□□□□□ -0.03
CACNB4-219ENST00000636108 PIAS4Q8N2W9 510 aaPredicted RBP14.51□□□□□ -0.09
CACNB4-219ENST00000636108 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
CACNB4-219ENST00000636108 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
CACNB4-219ENST00000636108 NACADO15069 1562 aa14.27□□□□□ -0.13
CACNB4-219ENST00000636108 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
CACNB4-219ENST00000636108 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
CACNB4-219ENST00000636108 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
CACNB4-219ENST00000636108 ADRA2BP18089 450 aa14.14□□□□□ -0.15
CACNB4-219ENST00000636108 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
CACNB4-219ENST00000636108 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
CACNB4-219ENST00000636108 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNB4-219ENST00000636108 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
CACNB4-219ENST00000636108 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
CACNB4-219ENST00000636108 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
CACNB4-219ENST00000636108 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
CACNB4-219ENST00000636108 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
CACNB4-219ENST00000636108 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
CACNB4-219ENST00000636108 CC2D2AQ9P2K1 1620 aa13.45□□□□□ -0.26
CACNB4-219ENST00000636108 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
CACNB4-219ENST00000636108 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
CACNB4-219ENST00000636108 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
CACNB4-219ENST00000636108 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
CACNB4-219ENST00000636108 SMARCA2P51531 1590 aa13.13□□□□□ -0.31
CACNB4-219ENST00000636108 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
CACNB4-219ENST00000636108 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
CACNB4-219ENST00000636108 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
CACNB4-219ENST00000636108 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
CACNB4-219ENST00000636108 MAPK8IP2Q13387 824 aaPredicted RBP13.05□□□□□ -0.32
CACNB4-219ENST00000636108 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
CACNB4-219ENST00000636108 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
CACNB4-219ENST00000636108 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
CACNB4-219ENST00000636108 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
CACNB4-219ENST00000636108 ERCC6Q03468 1493 aa12.9□□□□□ -0.34
CACNB4-219ENST00000636108 CUX2O14529 1486 aa12.84□□□□□ -0.35
CACNB4-219ENST00000636108 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
CACNB4-219ENST00000636108 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
CACNB4-219ENST00000636108 WIZO95785 1651 aa12.79□□□□□ -0.36
CACNB4-219ENST00000636108 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
CACNB4-219ENST00000636108 NESP48681 1621 aa12.78□□□□□ -0.36
CACNB4-219ENST00000636108 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
CACNB4-219ENST00000636108 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
CACNB4-219ENST00000636108 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
CACNB4-219ENST00000636108 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
CACNB4-219ENST00000636108 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
CACNB4-219ENST00000636108 KIF21AQ7Z4S6 1674 aa12.64□□□□□ -0.39
CACNB4-219ENST00000636108 CFTRP13569 1480 aa12.63□□□□□ -0.39
CACNB4-219ENST00000636108 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
CACNB4-219ENST00000636108 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
CACNB4-219ENST00000636108 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
CACNB4-219ENST00000636108 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
CACNB4-219ENST00000636108 WDR62O43379 1518 aa12.57□□□□□ -0.4
CACNB4-219ENST00000636108 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
CACNB4-219ENST00000636108 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
CACNB4-219ENST00000636108 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
CACNB4-219ENST00000636108 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
CACNB4-219ENST00000636108 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
CACNB4-219ENST00000636108 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
CACNB4-219ENST00000636108 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
CACNB4-219ENST00000636108 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
CACNB4-219ENST00000636108 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
CACNB4-219ENST00000636108 IFT140Q96RY7 1462 aa12.36□□□□□ -0.43
CACNB4-219ENST00000636108 TOPBP1Q92547 1522 aa12.36□□□□□ -0.43
CACNB4-219ENST00000636108 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
CACNB4-219ENST00000636108 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
CACNB4-219ENST00000636108 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
CACNB4-219ENST00000636108 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
CACNB4-219ENST00000636108 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
CACNB4-219ENST00000636108 SOGA1O94964 1423 aa12.22□□□□□ -0.45
CACNB4-219ENST00000636108 WDR97A6NE52 1622 aa12.21□□□□□ -0.45
CACNB4-219ENST00000636108 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.45
CACNB4-219ENST00000636108 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
CACNB4-219ENST00000636108 FGD5Q6ZNL6 1462 aa12.19□□□□□ -0.46
CACNB4-219ENST00000636108 CUX1P39880 1505 aa12.18□□□□□ -0.46
CACNB4-219ENST00000636108 AQRO60306 1485 aaKnown RBP eCLIP12.17□□□□□ -0.46
CACNB4-219ENST00000636108 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
CACNB4-219ENST00000636108 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
CACNB4-219ENST00000636108 TDRD9Q8NDG6 1382 aaKnown RBP12.12□□□□□ -0.47
CACNB4-219ENST00000636108 GRIN2BQ13224 1484 aa12.11□□□□□ -0.47
CACNB4-219ENST00000636108 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
CACNB4-219ENST00000636108 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
CACNB4-219ENST00000636108 FBLN2P98095 1184 aa12.1□□□□□ -0.47
CACNB4-219ENST00000636108 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
CACNB4-219ENST00000636108 ABCA10Q8WWZ4 1543 aa12.09□□□□□ -0.47
CACNB4-219ENST00000636108 SNAPC4Q5SXM2 1469 aa12.07□□□□□ -0.48
CACNB4-219ENST00000636108 GAPVD1Q14C86 1478 aa12.07□□□□□ -0.48
CACNB4-219ENST00000636108 CHMP7Q8WUX9 453 aaPredicted RBP12.06□□□□□ -0.48
CACNB4-219ENST00000636108 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
CACNB4-219ENST00000636108 CHD1O14646 1710 aa12.06□□□□□ -0.48
CACNB4-219ENST00000636108 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
CACNB4-219ENST00000636108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.486e-7■■■■■ 26.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms