RNA–Protein interactions for RNA: ENST00000635185.1

SMARCA2-236, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-236ENST00000635185 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
SMARCA2-236ENST00000635185 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
SMARCA2-236ENST00000635185 NISCHQ9Y2I1 1504 aa18.18■□□□□ 0.5
SMARCA2-236ENST00000635185 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
SMARCA2-236ENST00000635185 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
SMARCA2-236ENST00000635185 FOXD1Q16676 465 aa16.18■□□□□ 0.18
SMARCA2-236ENST00000635185 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
SMARCA2-236ENST00000635185 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
SMARCA2-236ENST00000635185 ABCC9O60706 1549 aa15.38■□□□□ 0.05
SMARCA2-236ENST00000635185 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
SMARCA2-236ENST00000635185 MSH5O43196 834 aa15.25■□□□□ 0.03
SMARCA2-236ENST00000635185 ADRA2BP18089 450 aa15.22■□□□□ 0.03
SMARCA2-236ENST00000635185 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
SMARCA2-236ENST00000635185 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
SMARCA2-236ENST00000635185 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
SMARCA2-236ENST00000635185 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
SMARCA2-236ENST00000635185 NACADO15069 1562 aa14.99□□□□□ -0.01
SMARCA2-236ENST00000635185 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
SMARCA2-236ENST00000635185 RB1CC1Q8TDY2 1594 aa14.93□□□□□ -0.02
SMARCA2-236ENST00000635185 UNC13AQ9UPW8 1703 aa14.68□□□□□ -0.06
SMARCA2-236ENST00000635185 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
SMARCA2-236ENST00000635185 POTEDQ86YR6 584 aa14.55□□□□□ -0.08
SMARCA2-236ENST00000635185 BICRAQ9NZM4 1560 aa14.52□□□□□ -0.08
SMARCA2-236ENST00000635185 SHROOM4Q9ULL8 1493 aa14.48□□□□□ -0.09
SMARCA2-236ENST00000635185 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMARCA2-236ENST00000635185 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
SMARCA2-236ENST00000635185 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
SMARCA2-236ENST00000635185 EIF4G1Q04637 1599 aaKnown RBP14.08□□□□□ -0.16
SMARCA2-236ENST00000635185 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
SMARCA2-236ENST00000635185 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
SMARCA2-236ENST00000635185 MROH2BQ7Z745 1585 aa14.01□□□□□ -0.17
SMARCA2-236ENST00000635185 CC2D2AQ9P2K1 1620 aa13.96□□□□□ -0.17
SMARCA2-236ENST00000635185 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
SMARCA2-236ENST00000635185 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
SMARCA2-236ENST00000635185 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
SMARCA2-236ENST00000635185 WIZO95785 1651 aa13.89□□□□□ -0.19
SMARCA2-236ENST00000635185 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
SMARCA2-236ENST00000635185 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
SMARCA2-236ENST00000635185 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
SMARCA2-236ENST00000635185 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
SMARCA2-236ENST00000635185 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
SMARCA2-236ENST00000635185 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
SMARCA2-236ENST00000635185 HMGXB3Q12766 1538 aa13.79□□□□□ -0.2
SMARCA2-236ENST00000635185 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
SMARCA2-236ENST00000635185 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
SMARCA2-236ENST00000635185 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-236ENST00000635185 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
SMARCA2-236ENST00000635185 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
SMARCA2-236ENST00000635185 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SMARCA2-236ENST00000635185 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
SMARCA2-236ENST00000635185 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
SMARCA2-236ENST00000635185 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
SMARCA2-236ENST00000635185 NESP48681 1621 aa13.42□□□□□ -0.26
SMARCA2-236ENST00000635185 CFTRP13569 1480 aa13.42□□□□□ -0.26
SMARCA2-236ENST00000635185 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
SMARCA2-236ENST00000635185 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
SMARCA2-236ENST00000635185 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
SMARCA2-236ENST00000635185 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
SMARCA2-236ENST00000635185 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
SMARCA2-236ENST00000635185 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
SMARCA2-236ENST00000635185 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
SMARCA2-236ENST00000635185 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
SMARCA2-236ENST00000635185 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-236ENST00000635185 ABCC8Q09428 1581 aa13.16□□□□□ -0.3
SMARCA2-236ENST00000635185 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
SMARCA2-236ENST00000635185 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-236ENST00000635185 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-236ENST00000635185 CUX1P39880 1505 aa13.13□□□□□ -0.31
SMARCA2-236ENST00000635185 WDR62O43379 1518 aa13.12□□□□□ -0.31
SMARCA2-236ENST00000635185 WRNQ14191 1432 aaPredicted RBP eCLIP13.12□□□□□ -0.31
SMARCA2-236ENST00000635185 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
SMARCA2-236ENST00000635185 TOPBP1Q92547 1522 aa13.11□□□□□ -0.31
SMARCA2-236ENST00000635185 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
SMARCA2-236ENST00000635185 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
SMARCA2-236ENST00000635185 TOP2BQ02880 1626 aa13.09□□□□□ -0.31
SMARCA2-236ENST00000635185 KCNA4P22459 653 aa13.04□□□□□ -0.32
SMARCA2-236ENST00000635185 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
SMARCA2-236ENST00000635185 CUX2O14529 1486 aa13.01□□□□□ -0.33
SMARCA2-236ENST00000635185 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-236ENST00000635185 TRIM41Q8WV44 630 aa12.98□□□□□ -0.33
SMARCA2-236ENST00000635185 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
SMARCA2-236ENST00000635185 RAD54L2Q9Y4B4 1467 aa12.96□□□□□ -0.34
SMARCA2-236ENST00000635185 SOGA1O94964 1423 aa12.96□□□□□ -0.34
SMARCA2-236ENST00000635185 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
SMARCA2-236ENST00000635185 WDR97A6NE52 1622 aa12.94□□□□□ -0.34
SMARCA2-236ENST00000635185 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-236ENST00000635185 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
SMARCA2-236ENST00000635185 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
SMARCA2-236ENST00000635185 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
SMARCA2-236ENST00000635185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCA2-236ENST00000635185 ABCA5Q8WWZ7 1642 aa12.85□□□□□ -0.35
SMARCA2-236ENST00000635185 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-236ENST00000635185 RUSC2Q8N2Y8 1516 aa12.84□□□□□ -0.35
SMARCA2-236ENST00000635185 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-236ENST00000635185 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
SMARCA2-236ENST00000635185 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMARCA2-236ENST00000635185 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
SMARCA2-236ENST00000635185 KIF27Q86VH2 1401 aa12.8□□□□□ -0.36
SMARCA2-236ENST00000635185 PBRM1Q86U86 1689 aa12.8□□□□□ -0.36
SMARCA2-236ENST00000635185 IGF1RP08069 1367 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms