RNA–Protein interactions for RNA: ENST00000633671.1

LINC01002-231, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 830 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-231ENST00000633671 AEBP2Q6ZN18 517 aaPredicted RBP36.02■■■■□ 3.36
LINC01002-231ENST00000633671 CHIC1Q5VXU3 224 aa35.13■■■■□ 3.21
LINC01002-231ENST00000633671 NISCHQ9Y2I1 1504 aa32.24■■■□□ 2.75
LINC01002-231ENST00000633671 PHF23Q9BUL5 403 aaPredicted RBP30.9■■■□□ 2.54
LINC01002-231ENST00000633671 SENP3Q9H4L4 574 aaPredicted RBP30.54■■■□□ 2.48
LINC01002-231ENST00000633671 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.2
LINC01002-231ENST00000633671 ABCC9O60706 1549 aa28.58■■■□□ 2.17
LINC01002-231ENST00000633671 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
LINC01002-231ENST00000633671 FOXD1Q16676 465 aa28.37■■■□□ 2.13
LINC01002-231ENST00000633671 RB1CC1Q8TDY2 1594 aa27.29■■□□□ 1.96
LINC01002-231ENST00000633671 PPP6R1Q9UPN7 881 aa27.27■■□□□ 1.96
LINC01002-231ENST00000633671 ADRA2BP18089 450 aa27.22■■□□□ 1.95
LINC01002-231ENST00000633671 DCAF8L2P0C7V8 631 aa27.19■■□□□ 1.94
LINC01002-231ENST00000633671 NACADO15069 1562 aa27.16■■□□□ 1.94
LINC01002-231ENST00000633671 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
LINC01002-231ENST00000633671 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
LINC01002-231ENST00000633671 PIAS4Q8N2W9 510 aaPredicted RBP26.7■■□□□ 1.86
LINC01002-231ENST00000633671 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
LINC01002-231ENST00000633671 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
LINC01002-231ENST00000633671 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
LINC01002-231ENST00000633671 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
LINC01002-231ENST00000633671 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
LINC01002-231ENST00000633671 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
LINC01002-231ENST00000633671 MSH5O43196 834 aa26.15■■□□□ 1.78
LINC01002-231ENST00000633671 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
LINC01002-231ENST00000633671 EIF4G1Q04637 1599 aaKnown RBP25.81■■□□□ 1.72
LINC01002-231ENST00000633671 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
LINC01002-231ENST00000633671 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
LINC01002-231ENST00000633671 PPP4R3CPQ6ZMV5 832 aa25.1■■□□□ 1.61
LINC01002-231ENST00000633671 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
LINC01002-231ENST00000633671 SMARCA4P51532 1647 aa25.08■■□□□ 1.6
LINC01002-231ENST00000633671 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
LINC01002-231ENST00000633671 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
LINC01002-231ENST00000633671 SMARCA2P51531 1590 aa25■■□□□ 1.59
LINC01002-231ENST00000633671 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
LINC01002-231ENST00000633671 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
LINC01002-231ENST00000633671 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
LINC01002-231ENST00000633671 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
LINC01002-231ENST00000633671 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
LINC01002-231ENST00000633671 MAPK8IP2Q13387 824 aaPredicted RBP24.71■■□□□ 1.55
LINC01002-231ENST00000633671 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
LINC01002-231ENST00000633671 NESP48681 1621 aa24.61■■□□□ 1.53
LINC01002-231ENST00000633671 WIZO95785 1651 aa24.55■■□□□ 1.52
LINC01002-231ENST00000633671 CUX2O14529 1486 aa24.5■■□□□ 1.51
LINC01002-231ENST00000633671 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
LINC01002-231ENST00000633671 KCNA4P22459 653 aa24.46■■□□□ 1.51
LINC01002-231ENST00000633671 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
LINC01002-231ENST00000633671 CNKSR2Q8WXI2 1034 aa24.41■■□□□ 1.5
LINC01002-231ENST00000633671 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
LINC01002-231ENST00000633671 DMRT2Q9Y5R5 561 aa24.39■■□□□ 1.49
LINC01002-231ENST00000633671 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
LINC01002-231ENST00000633671 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
LINC01002-231ENST00000633671 TOP2AP11388 1531 aaKnown RBP24.28■■□□□ 1.48
LINC01002-231ENST00000633671 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
LINC01002-231ENST00000633671 KIF21AQ7Z4S6 1674 aa24.26■■□□□ 1.47
LINC01002-231ENST00000633671 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
LINC01002-231ENST00000633671 CFTRP13569 1480 aa24.13■■□□□ 1.45
LINC01002-231ENST00000633671 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
LINC01002-231ENST00000633671 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
LINC01002-231ENST00000633671 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
LINC01002-231ENST00000633671 NPM3O75607 178 aaKnown RBP24.08■■□□□ 1.45
LINC01002-231ENST00000633671 WDR62O43379 1518 aa24.03■■□□□ 1.44
LINC01002-231ENST00000633671 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
LINC01002-231ENST00000633671 RNF216Q9NWF9 866 aaPredicted RBP23.95■■□□□ 1.42
LINC01002-231ENST00000633671 POTEDQ86YR6 584 aa23.91■■□□□ 1.42
LINC01002-231ENST00000633671 HOXD11P31277 338 aaPredicted RBP23.89■■□□□ 1.41
LINC01002-231ENST00000633671 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
LINC01002-231ENST00000633671 PRDM2Q13029 1718 aa23.82■■□□□ 1.4
LINC01002-231ENST00000633671 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
LINC01002-231ENST00000633671 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
LINC01002-231ENST00000633671 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
LINC01002-231ENST00000633671 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
LINC01002-231ENST00000633671 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
LINC01002-231ENST00000633671 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
LINC01002-231ENST00000633671 OSCARQ8IYS5 282 aa23.46■■□□□ 1.35
LINC01002-231ENST00000633671 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
LINC01002-231ENST00000633671 EIF4G3O43432 1585 aaKnown RBP23.38■■□□□ 1.33
LINC01002-231ENST00000633671 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
LINC01002-231ENST00000633671 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.33
LINC01002-231ENST00000633671 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
LINC01002-231ENST00000633671 SOGA1O94964 1423 aa23.33■■□□□ 1.33
LINC01002-231ENST00000633671 CUX1P39880 1505 aa23.33■■□□□ 1.33
LINC01002-231ENST00000633671 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
LINC01002-231ENST00000633671 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
LINC01002-231ENST00000633671 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
LINC01002-231ENST00000633671 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
LINC01002-231ENST00000633671 DCAF8L1A6NGE4 600 aa23.25■■□□□ 1.31
LINC01002-231ENST00000633671 FBLN2P98095 1184 aa23.2■■□□□ 1.3
LINC01002-231ENST00000633671 WDR97A6NE52 1622 aa23.16■■□□□ 1.3
LINC01002-231ENST00000633671 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
LINC01002-231ENST00000633671 CHD1O14646 1710 aa23.13■■□□□ 1.29
LINC01002-231ENST00000633671 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
LINC01002-231ENST00000633671 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
LINC01002-231ENST00000633671 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
LINC01002-231ENST00000633671 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
LINC01002-231ENST00000633671 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
LINC01002-231ENST00000633671 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
LINC01002-231ENST00000633671 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
LINC01002-231ENST00000633671 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
LINC01002-231ENST00000633671 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms