RNA–Protein interactions for RNA: ENST00000628166.1

GRIN2B-203, Transcript of glutamate ionotropic receptor NMDA type subunit 2B, humanhuman

TSL 5

Gene GRIN2B, Length 2,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2B-203ENST00000628166 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.29
GRIN2B-203ENST00000628166 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
GRIN2B-203ENST00000628166 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
GRIN2B-203ENST00000628166 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
GRIN2B-203ENST00000628166 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
GRIN2B-203ENST00000628166 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.7
GRIN2B-203ENST00000628166 ABCC9O60706 1549 aa19.02■□□□□ 0.64
GRIN2B-203ENST00000628166 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
GRIN2B-203ENST00000628166 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
GRIN2B-203ENST00000628166 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
GRIN2B-203ENST00000628166 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
GRIN2B-203ENST00000628166 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
GRIN2B-203ENST00000628166 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
GRIN2B-203ENST00000628166 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
GRIN2B-203ENST00000628166 NACADO15069 1562 aa18.24■□□□□ 0.51
GRIN2B-203ENST00000628166 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
GRIN2B-203ENST00000628166 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
GRIN2B-203ENST00000628166 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
GRIN2B-203ENST00000628166 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
GRIN2B-203ENST00000628166 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
GRIN2B-203ENST00000628166 WIZO95785 1651 aa17.93■□□□□ 0.46
GRIN2B-203ENST00000628166 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
GRIN2B-203ENST00000628166 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
GRIN2B-203ENST00000628166 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
GRIN2B-203ENST00000628166 PELP1Q8IZL8 1130 aaKnown RBP17.69■□□□□ 0.42
GRIN2B-203ENST00000628166 BAZ1AQ9NRL2 1556 aaPredicted RBP17.68■□□□□ 0.42
GRIN2B-203ENST00000628166 PCGF6Q9BYE7 350 aa17.65■□□□□ 0.42
GRIN2B-203ENST00000628166 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
GRIN2B-203ENST00000628166 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.4
GRIN2B-203ENST00000628166 PPARGC1BQ86YN6 1023 aaKnown RBP17.55■□□□□ 0.4
GRIN2B-203ENST00000628166 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
GRIN2B-203ENST00000628166 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
GRIN2B-203ENST00000628166 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
GRIN2B-203ENST00000628166 TTBK1Q5TCY1 1321 aaPredicted RBP17.39■□□□□ 0.37
GRIN2B-203ENST00000628166 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
GRIN2B-203ENST00000628166 HRCP23327 699 aa17.34■□□□□ 0.37
GRIN2B-203ENST00000628166 SOGA1O94964 1423 aa17.32■□□□□ 0.36
GRIN2B-203ENST00000628166 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
GRIN2B-203ENST00000628166 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
GRIN2B-203ENST00000628166 RANGAP1P46060 587 aaPredicted RBP17.3■□□□□ 0.36
GRIN2B-203ENST00000628166 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
GRIN2B-203ENST00000628166 MYT1Q01538 1121 aa17.22■□□□□ 0.35
GRIN2B-203ENST00000628166 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
GRIN2B-203ENST00000628166 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
GRIN2B-203ENST00000628166 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
GRIN2B-203ENST00000628166 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
GRIN2B-203ENST00000628166 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
GRIN2B-203ENST00000628166 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
GRIN2B-203ENST00000628166 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
GRIN2B-203ENST00000628166 NCAPD3P42695 1498 aa17■□□□□ 0.31
GRIN2B-203ENST00000628166 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
GRIN2B-203ENST00000628166 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
GRIN2B-203ENST00000628166 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
GRIN2B-203ENST00000628166 NESP48681 1621 aa16.83■□□□□ 0.29
GRIN2B-203ENST00000628166 HMGXB3Q12766 1538 aa16.83■□□□□ 0.29
GRIN2B-203ENST00000628166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
GRIN2B-203ENST00000628166 CUX1P39880 1505 aa16.8■□□□□ 0.28
GRIN2B-203ENST00000628166 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
GRIN2B-203ENST00000628166 CFTRP13569 1480 aa16.8■□□□□ 0.28
GRIN2B-203ENST00000628166 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
GRIN2B-203ENST00000628166 GOLGA3Q08378 1498 aa16.76■□□□□ 0.27
GRIN2B-203ENST00000628166 EEA1Q15075 1411 aa16.72■□□□□ 0.27
GRIN2B-203ENST00000628166 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
GRIN2B-203ENST00000628166 CLIP1P30622 1438 aa16.68■□□□□ 0.26
GRIN2B-203ENST00000628166 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
GRIN2B-203ENST00000628166 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
GRIN2B-203ENST00000628166 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
GRIN2B-203ENST00000628166 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
GRIN2B-203ENST00000628166 CUX2O14529 1486 aa16.64■□□□□ 0.25
GRIN2B-203ENST00000628166 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
GRIN2B-203ENST00000628166 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
GRIN2B-203ENST00000628166 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
GRIN2B-203ENST00000628166 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
GRIN2B-203ENST00000628166 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
GRIN2B-203ENST00000628166 KANK4Q5T7N3 995 aaPredicted RBP16.57■□□□□ 0.24
GRIN2B-203ENST00000628166 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
GRIN2B-203ENST00000628166 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
GRIN2B-203ENST00000628166 IGF1RP08069 1367 aa16.57■□□□□ 0.24
GRIN2B-203ENST00000628166 APLP2Q06481 763 aa16.56■□□□□ 0.24
GRIN2B-203ENST00000628166 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
GRIN2B-203ENST00000628166 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
GRIN2B-203ENST00000628166 KIF21BO75037 1637 aa16.52■□□□□ 0.24
GRIN2B-203ENST00000628166 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
GRIN2B-203ENST00000628166 ITGAEP38570 1179 aa16.48■□□□□ 0.23
GRIN2B-203ENST00000628166 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
GRIN2B-203ENST00000628166 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
GRIN2B-203ENST00000628166 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
GRIN2B-203ENST00000628166 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
GRIN2B-203ENST00000628166 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
GRIN2B-203ENST00000628166 ARID3CA6NKF2 412 aa16.38■□□□□ 0.21
GRIN2B-203ENST00000628166 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
GRIN2B-203ENST00000628166 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
GRIN2B-203ENST00000628166 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
GRIN2B-203ENST00000628166 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
GRIN2B-203ENST00000628166 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
GRIN2B-203ENST00000628166 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
GRIN2B-203ENST00000628166 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.2
GRIN2B-203ENST00000628166 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
GRIN2B-203ENST00000628166 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
GRIN2B-203ENST00000628166 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms