RNA–Protein interactions for RNA: ENST00000627909.2

LINC02028-227, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-227ENST00000627909 AEBP2Q6ZN18 517 aaPredicted RBP9.75□□□□□ -0.85
LINC02028-227ENST00000627909 CHIC1Q5VXU3 224 aa9.37□□□□□ -0.91
LINC02028-227ENST00000627909 PHF23Q9BUL5 403 aaPredicted RBP8.27□□□□□ -1.09
LINC02028-227ENST00000627909 SENP3Q9H4L4 574 aaPredicted RBP8.23□□□□□ -1.09
LINC02028-227ENST00000627909 FOXD1Q16676 465 aa7.7□□□□□ -1.18
LINC02028-227ENST00000627909 DNAJC5Q9H3Z4 198 aa7.68□□□□□ -1.18
LINC02028-227ENST00000627909 DNAJC5BQ9UF47 199 aa7.64□□□□□ -1.19
LINC02028-227ENST00000627909 PLPPR3Q6T4P5 718 aa7.53□□□□□ -1.2
LINC02028-227ENST00000627909 PPP6R1Q9UPN7 881 aa7.34□□□□□ -1.23
LINC02028-227ENST00000627909 ADRA2BP18089 450 aa7.3□□□□□ -1.24
LINC02028-227ENST00000627909 PIAS4Q8N2W9 510 aaPredicted RBP7.19□□□□□ -1.26
LINC02028-227ENST00000627909 MSH5O43196 834 aa7.1□□□□□ -1.27
LINC02028-227ENST00000627909 ABCC9O60706 1549 aa7.06□□□□□ -1.28
LINC02028-227ENST00000627909 TRIM41Q8WV44 630 aa6.92□□□□□ -1.3
LINC02028-227ENST00000627909 ILDR1Q86SU0 546 aaPredicted RBP6.84□□□□□ -1.31
LINC02028-227ENST00000627909 POTEDQ86YR6 584 aa6.7□□□□□ -1.34
LINC02028-227ENST00000627909 MAPK8IP2Q13387 824 aaPredicted RBP6.67□□□□□ -1.34
LINC02028-227ENST00000627909 PPP4R3CPQ6ZMV5 832 aa6.64□□□□□ -1.35
LINC02028-227ENST00000627909 SCAF1Q9H7N4 1312 aaKnown RBP6.62□□□□□ -1.35
LINC02028-227ENST00000627909 DMRT2Q9Y5R5 561 aa6.57□□□□□ -1.36
LINC02028-227ENST00000627909 CNKSR2Q8WXI2 1034 aa6.47□□□□□ -1.37
LINC02028-227ENST00000627909 CUX2O14529 1486 aa6.46□□□□□ -1.38
LINC02028-227ENST00000627909 CECR2Q9BXF3 1484 aa6.43□□□□□ -1.38
LINC02028-227ENST00000627909 HOXD11P31277 338 aaPredicted RBP6.4□□□□□ -1.38
LINC02028-227ENST00000627909 NCBP3Q53F19 620 aaKnown RBP6.39□□□□□ -1.39
LINC02028-227ENST00000627909 RNF216Q9NWF9 866 aaPredicted RBP6.38□□□□□ -1.39
LINC02028-227ENST00000627909 KCNA4P22459 653 aa6.37□□□□□ -1.39
LINC02028-227ENST00000627909 PABPN1Q86U42 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
LINC02028-227ENST00000627909 CC2D2AQ9P2K1 1620 aa6.36□□□□□ -1.39
LINC02028-227ENST00000627909 NPM3O75607 178 aaKnown RBP6.35□□□□□ -1.39
LINC02028-227ENST00000627909 SOCS7O14512 581 aa6.34□□□□□ -1.39
LINC02028-227ENST00000627909 LMTK3Q96Q04 1460 aa6.34□□□□□ -1.4
LINC02028-227ENST00000627909 NISCHQ9Y2I1 1504 aa6.32□□□□□ -1.4
LINC02028-227ENST00000627909 ILDR2Q71H61 639 aa6.31□□□□□ -1.4
LINC02028-227ENST00000627909 UNC13AQ9UPW8 1703 aa6.28□□□□□ -1.4
LINC02028-227ENST00000627909 DCAF8L1A6NGE4 600 aa6.25□□□□□ -1.41
LINC02028-227ENST00000627909 RB1CC1Q8TDY2 1594 aa6.18□□□□□ -1.42
LINC02028-227ENST00000627909 BICRAQ9NZM4 1560 aa6.18□□□□□ -1.42
LINC02028-227ENST00000627909 TRHP20396 242 aaPredicted RBP6.16□□□□□ -1.42
LINC02028-227ENST00000627909 RIMBP3CA6NJZ7 1639 aa6.14□□□□□ -1.43
LINC02028-227ENST00000627909 RIMBP3BA6NNM3 1639 aa6.14□□□□□ -1.43
LINC02028-227ENST00000627909 RIMBP3Q9UFD9 1639 aa6.14□□□□□ -1.43
LINC02028-227ENST00000627909 FBXO41Q8TF61 875 aa6.1□□□□□ -1.43
LINC02028-227ENST00000627909 RNF39Q9H2S5 420 aa6.1□□□□□ -1.43
LINC02028-227ENST00000627909 ERCC6Q03468 1493 aa6.09□□□□□ -1.43
LINC02028-227ENST00000627909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC02028-227ENST00000627909 SLC4A2P04920 1241 aa6.05□□□□□ -1.44
LINC02028-227ENST00000627909 DISP3Q9P2K9 1392 aa6.05□□□□□ -1.44
LINC02028-227ENST00000627909 EIF4G1Q04637 1599 aaKnown RBP6.04□□□□□ -1.44
LINC02028-227ENST00000627909 ERCC6L2Q5T890 1561 aa6.01□□□□□ -1.45
LINC02028-227ENST00000627909 SLC4A1APQ9BWU0 796 aaKnown RBP6.01□□□□□ -1.45
LINC02028-227ENST00000627909 CCDC180Q9P1Z9 1646 aa6□□□□□ -1.45
LINC02028-227ENST00000627909 CACNB1Q02641 598 aaPredicted RBP6□□□□□ -1.45
LINC02028-227ENST00000627909 C1QBPQ07021 282 aaKnown RBP6□□□□□ -1.45
LINC02028-227ENST00000627909 BAZ1AQ9NRL2 1556 aaPredicted RBP5.99□□□□□ -1.45
LINC02028-227ENST00000627909 U3KPZ7 1027 aaPredicted RBP5.99□□□□□ -1.45
LINC02028-227ENST00000627909 THOC2Q8NI27 1593 aaKnown RBP5.97□□□□□ -1.45
LINC02028-227ENST00000627909 ARHGEF11O15085 1522 aa5.95□□□□□ -1.46
LINC02028-227ENST00000627909 SRCAPQ6ZRS2 3230 aa5.95□□□□□ -1.46
LINC02028-227ENST00000627909 HECW2Q9P2P5 1572 aa5.94□□□□□ -1.46
LINC02028-227ENST00000627909 KDM4FA0A1W2PPD8 638 aa5.94□□□□□ -1.46
LINC02028-227ENST00000627909 SPATA31D1Q6ZQQ2 1576 aa5.92□□□□□ -1.46
LINC02028-227ENST00000627909 CYB5RLQ6IPT4 315 aa5.91□□□□□ -1.46
LINC02028-227ENST00000627909 OSCARQ8IYS5 282 aa5.91□□□□□ -1.46
LINC02028-227ENST00000627909 ZBTB22O15209 634 aa5.87□□□□□ -1.47
LINC02028-227ENST00000627909 FOXD4L1Q9NU39 408 aa5.87□□□□□ -1.47
LINC02028-227ENST00000627909 NACADO15069 1562 aa5.86□□□□□ -1.47
LINC02028-227ENST00000627909 SPINK5Q9NQ38 1064 aaPredicted RBP5.86□□□□□ -1.47
LINC02028-227ENST00000627909 ARAP1Q96P48 1450 aa5.84□□□□□ -1.47
LINC02028-227ENST00000627909 MYCNP04198 464 aaPredicted RBP5.83□□□□□ -1.48
LINC02028-227ENST00000627909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.81□□□□□ -1.48
LINC02028-227ENST00000627909 HNRNPUL2Q1KMD3 747 aaKnown RBP5.81□□□□□ -1.48
LINC02028-227ENST00000627909 NESP48681 1621 aa5.81□□□□□ -1.48
LINC02028-227ENST00000627909 CAPN15O75808 1086 aa5.8□□□□□ -1.48
LINC02028-227ENST00000627909 SAMD1Q6SPF0 538 aaPredicted RBP5.8□□□□□ -1.48
LINC02028-227ENST00000627909 SYNJ2O15056 1496 aa5.79□□□□□ -1.48
LINC02028-227ENST00000627909 SHROOM4Q9ULL8 1493 aa5.77□□□□□ -1.49
LINC02028-227ENST00000627909 SMARCA2P51531 1590 aa5.77□□□□□ -1.49
LINC02028-227ENST00000627909 DSG3P32926 999 aa5.77□□□□□ -1.49
LINC02028-227ENST00000627909 APLP2Q06481 763 aa5.76□□□□□ -1.49
LINC02028-227ENST00000627909 ATF5Q9Y2D1 282 aaPredicted RBP5.74□□□□□ -1.49
LINC02028-227ENST00000627909 KIF21AQ7Z4S6 1674 aa5.74□□□□□ -1.49
LINC02028-227ENST00000627909 CSRNP3Q8WYN3 585 aa5.73□□□□□ -1.49
LINC02028-227ENST00000627909 ZNF219Q9P2Y4 722 aaPredicted RBP5.73□□□□□ -1.49
LINC02028-227ENST00000627909 ABCB7O75027 752 aa5.7□□□□□ -1.5
LINC02028-227ENST00000627909 EHMT2Q96KQ7 1210 aa5.7□□□□□ -1.5
LINC02028-227ENST00000627909 ATXN8OSP0DMR3 200 aa5.67□□□□□ -1.5
LINC02028-227ENST00000627909 KIF13AQ9H1H9 1805 aa5.65□□□□□ -1.5
LINC02028-227ENST00000627909 POLA2Q14181 598 aa5.65□□□□□ -1.5
LINC02028-227ENST00000627909 IFFO2Q5TF58 517 aa5.64□□□□□ -1.51
LINC02028-227ENST00000627909 ADGRL1O94910 1474 aa5.63□□□□□ -1.51
LINC02028-227ENST00000627909 WDR62O43379 1518 aa5.57□□□□□ -1.52
LINC02028-227ENST00000627909 DCAF8L2P0C7V8 631 aa5.56□□□□□ -1.52
LINC02028-227ENST00000627909 CERKQ8TCT0 537 aa5.53□□□□□ -1.52
LINC02028-227ENST00000627909 CHD1O14646 1710 aa5.53□□□□□ -1.52
LINC02028-227ENST00000627909 KDM6BO15054 1643 aa5.52□□□□□ -1.53
LINC02028-227ENST00000627909 MRC2Q9UBG0 1479 aa5.51□□□□□ -1.53
LINC02028-227ENST00000627909 RSF1Q96T23 1441 aaPredicted RBP5.5□□□□□ -1.53
LINC02028-227ENST00000627909 LAMC3Q9Y6N6 1575 aa5.5□□□□□ -1.53
LINC02028-227ENST00000627909 SCRIBQ14160 1630 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms