RNA–Protein interactions for RNA: ENST00000626392.1

LINC01955-201, Transcript of long intergenic non-protein coding RNA 1955, humanhuman

TSL 5 BASIC

Gene LINC01955, Length 792 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01955-201ENST00000626392 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
LINC01955-201ENST00000626392 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
LINC01955-201ENST00000626392 NISCHQ9Y2I1 1504 aa15.61■□□□□ 0.09
LINC01955-201ENST00000626392 PHF23Q9BUL5 403 aaPredicted RBP15.23■□□□□ 0.03
LINC01955-201ENST00000626392 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
LINC01955-201ENST00000626392 ABCC9O60706 1549 aa14.66□□□□□ -0.06
LINC01955-201ENST00000626392 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
LINC01955-201ENST00000626392 CCDC180Q9P1Z9 1646 aa14.29□□□□□ -0.12
LINC01955-201ENST00000626392 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
LINC01955-201ENST00000626392 RB1CC1Q8TDY2 1594 aa13.74□□□□□ -0.21
LINC01955-201ENST00000626392 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
LINC01955-201ENST00000626392 FOXD1Q16676 465 aa13.52□□□□□ -0.25
LINC01955-201ENST00000626392 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC01955-201ENST00000626392 NACADO15069 1562 aa13.49□□□□□ -0.25
LINC01955-201ENST00000626392 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
LINC01955-201ENST00000626392 DCAF8L2P0C7V8 631 aa13.34□□□□□ -0.27
LINC01955-201ENST00000626392 ADRA2BP18089 450 aa13.33□□□□□ -0.28
LINC01955-201ENST00000626392 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
LINC01955-201ENST00000626392 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
LINC01955-201ENST00000626392 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
LINC01955-201ENST00000626392 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
LINC01955-201ENST00000626392 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
LINC01955-201ENST00000626392 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
LINC01955-201ENST00000626392 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
LINC01955-201ENST00000626392 SHROOM4Q9ULL8 1493 aa13.01□□□□□ -0.33
LINC01955-201ENST00000626392 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
LINC01955-201ENST00000626392 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
LINC01955-201ENST00000626392 KCNA4P22459 653 aa12.87□□□□□ -0.35
LINC01955-201ENST00000626392 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
LINC01955-201ENST00000626392 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
LINC01955-201ENST00000626392 CUX2O14529 1486 aa12.71□□□□□ -0.38
LINC01955-201ENST00000626392 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
LINC01955-201ENST00000626392 ERCC6Q03468 1493 aa12.66□□□□□ -0.38
LINC01955-201ENST00000626392 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
LINC01955-201ENST00000626392 SCAF1Q9H7N4 1312 aaKnown RBP12.5□□□□□ -0.41
LINC01955-201ENST00000626392 NESP48681 1621 aa12.5□□□□□ -0.41
LINC01955-201ENST00000626392 THOC2Q8NI27 1593 aaKnown RBP12.49□□□□□ -0.41
LINC01955-201ENST00000626392 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
LINC01955-201ENST00000626392 MSH5O43196 834 aa12.47□□□□□ -0.41
LINC01955-201ENST00000626392 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
LINC01955-201ENST00000626392 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
LINC01955-201ENST00000626392 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
LINC01955-201ENST00000626392 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
LINC01955-201ENST00000626392 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
LINC01955-201ENST00000626392 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
LINC01955-201ENST00000626392 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
LINC01955-201ENST00000626392 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
LINC01955-201ENST00000626392 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
LINC01955-201ENST00000626392 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
LINC01955-201ENST00000626392 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
LINC01955-201ENST00000626392 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
LINC01955-201ENST00000626392 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
LINC01955-201ENST00000626392 PEG3Q9GZU2 1588 aa12.14□□□□□ -0.47
LINC01955-201ENST00000626392 WDR62O43379 1518 aa12.14□□□□□ -0.47
LINC01955-201ENST00000626392 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
LINC01955-201ENST00000626392 PDS5BQ9NTI5 1447 aa12.13□□□□□ -0.47
LINC01955-201ENST00000626392 RIMBP3CA6NJZ7 1639 aa12.1□□□□□ -0.47
LINC01955-201ENST00000626392 RIMBP3BA6NNM3 1639 aa12.1□□□□□ -0.47
LINC01955-201ENST00000626392 RIMBP3Q9UFD9 1639 aa12.1□□□□□ -0.47
LINC01955-201ENST00000626392 MROH2BQ7Z745 1585 aa12.08□□□□□ -0.48
LINC01955-201ENST00000626392 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.49
LINC01955-201ENST00000626392 WIZO95785 1651 aa12□□□□□ -0.49
LINC01955-201ENST00000626392 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
LINC01955-201ENST00000626392 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
LINC01955-201ENST00000626392 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
LINC01955-201ENST00000626392 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
LINC01955-201ENST00000626392 PRDM2Q13029 1718 aa11.95□□□□□ -0.5
LINC01955-201ENST00000626392 ARHGEF11O15085 1522 aa11.95□□□□□ -0.5
LINC01955-201ENST00000626392 CHD1O14646 1710 aa11.92□□□□□ -0.5
LINC01955-201ENST00000626392 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
LINC01955-201ENST00000626392 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
LINC01955-201ENST00000626392 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
LINC01955-201ENST00000626392 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
LINC01955-201ENST00000626392 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
LINC01955-201ENST00000626392 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
LINC01955-201ENST00000626392 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
LINC01955-201ENST00000626392 CFTRP13569 1480 aa11.81□□□□□ -0.52
LINC01955-201ENST00000626392 ARAP1Q96P48 1450 aa11.81□□□□□ -0.52
LINC01955-201ENST00000626392 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
LINC01955-201ENST00000626392 ZBTB22O15209 634 aa11.75□□□□□ -0.53
LINC01955-201ENST00000626392 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
LINC01955-201ENST00000626392 IFT140Q96RY7 1462 aa11.74□□□□□ -0.53
LINC01955-201ENST00000626392 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
LINC01955-201ENST00000626392 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
LINC01955-201ENST00000626392 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
LINC01955-201ENST00000626392 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
LINC01955-201ENST00000626392 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01955-201ENST00000626392 RSF1Q96T23 1441 aaPredicted RBP11.63□□□□□ -0.55
LINC01955-201ENST00000626392 FBLN2P98095 1184 aa11.63□□□□□ -0.55
LINC01955-201ENST00000626392 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
LINC01955-201ENST00000626392 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
LINC01955-201ENST00000626392 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
LINC01955-201ENST00000626392 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
LINC01955-201ENST00000626392 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
LINC01955-201ENST00000626392 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
LINC01955-201ENST00000626392 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
LINC01955-201ENST00000626392 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
LINC01955-201ENST00000626392 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
LINC01955-201ENST00000626392 WDR97A6NE52 1622 aa11.5□□□□□ -0.57
LINC01955-201ENST00000626392 TDRD9Q8NDG6 1382 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms