RNA–Protein interactions for RNA: ENST00000621936.1

PCCA-210, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

Gene PCCA, Length 1,850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-210ENST00000621936 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
PCCA-210ENST00000621936 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
PCCA-210ENST00000621936 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
PCCA-210ENST00000621936 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
PCCA-210ENST00000621936 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
PCCA-210ENST00000621936 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
PCCA-210ENST00000621936 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
PCCA-210ENST00000621936 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
PCCA-210ENST00000621936 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
PCCA-210ENST00000621936 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
PCCA-210ENST00000621936 NACADO15069 1562 aa19.83■□□□□ 0.76
PCCA-210ENST00000621936 ABCC9O60706 1549 aa19.76■□□□□ 0.75
PCCA-210ENST00000621936 SCRIBQ14160 1630 aa19.7■□□□□ 0.74
PCCA-210ENST00000621936 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
PCCA-210ENST00000621936 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
PCCA-210ENST00000621936 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
PCCA-210ENST00000621936 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
PCCA-210ENST00000621936 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
PCCA-210ENST00000621936 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
PCCA-210ENST00000621936 WIZO95785 1651 aa19.01■□□□□ 0.63
PCCA-210ENST00000621936 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
PCCA-210ENST00000621936 HRCP23327 699 aa18.95■□□□□ 0.62
PCCA-210ENST00000621936 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
PCCA-210ENST00000621936 LOC105371045A0A1W2PR82 267 aa18.94■□□□□ 0.62
PCCA-210ENST00000621936 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
PCCA-210ENST00000621936 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
PCCA-210ENST00000621936 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
PCCA-210ENST00000621936 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
PCCA-210ENST00000621936 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.6
PCCA-210ENST00000621936 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
PCCA-210ENST00000621936 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
PCCA-210ENST00000621936 PABPN1Q86U42 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
PCCA-210ENST00000621936 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
PCCA-210ENST00000621936 EEA1Q15075 1411 aa18.54■□□□□ 0.56
PCCA-210ENST00000621936 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
PCCA-210ENST00000621936 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
PCCA-210ENST00000621936 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
PCCA-210ENST00000621936 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
PCCA-210ENST00000621936 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
PCCA-210ENST00000621936 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
PCCA-210ENST00000621936 TNIKQ9UKE5 1360 aa18.34■□□□□ 0.53
PCCA-210ENST00000621936 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
PCCA-210ENST00000621936 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
PCCA-210ENST00000621936 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
PCCA-210ENST00000621936 SOGA1O94964 1423 aa18.28■□□□□ 0.52
PCCA-210ENST00000621936 PPARGC1BQ86YN6 1023 aaKnown RBP18.24■□□□□ 0.51
PCCA-210ENST00000621936 GOLGA3Q08378 1498 aa18.23■□□□□ 0.51
PCCA-210ENST00000621936 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
PCCA-210ENST00000621936 KIF21BO75037 1637 aa18.2■□□□□ 0.5
PCCA-210ENST00000621936 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
PCCA-210ENST00000621936 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
PCCA-210ENST00000621936 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
PCCA-210ENST00000621936 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
PCCA-210ENST00000621936 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
PCCA-210ENST00000621936 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
PCCA-210ENST00000621936 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
PCCA-210ENST00000621936 CFTRP13569 1480 aa18■□□□□ 0.47
PCCA-210ENST00000621936 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
PCCA-210ENST00000621936 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
PCCA-210ENST00000621936 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
PCCA-210ENST00000621936 CLIP1P30622 1438 aa17.94■□□□□ 0.46
PCCA-210ENST00000621936 VPS8Q8N3P4 1428 aa17.91■□□□□ 0.46
PCCA-210ENST00000621936 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
PCCA-210ENST00000621936 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
PCCA-210ENST00000621936 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
PCCA-210ENST00000621936 CUX1P39880 1505 aa17.87■□□□□ 0.45
PCCA-210ENST00000621936 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
PCCA-210ENST00000621936 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
PCCA-210ENST00000621936 KIF27Q86VH2 1401 aa17.83■□□□□ 0.44
PCCA-210ENST00000621936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.43
PCCA-210ENST00000621936 APLP2Q06481 763 aa17.72■□□□□ 0.43
PCCA-210ENST00000621936 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
PCCA-210ENST00000621936 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
PCCA-210ENST00000621936 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
PCCA-210ENST00000621936 CUX2O14529 1486 aa17.6■□□□□ 0.41
PCCA-210ENST00000621936 IGF1RP08069 1367 aa17.59■□□□□ 0.41
PCCA-210ENST00000621936 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
PCCA-210ENST00000621936 LAMC3Q9Y6N6 1575 aa17.58■□□□□ 0.41
PCCA-210ENST00000621936 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.41
PCCA-210ENST00000621936 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
PCCA-210ENST00000621936 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
PCCA-210ENST00000621936 ARHGAP35Q9NRY4 1499 aa17.55■□□□□ 0.4
PCCA-210ENST00000621936 RRBP1Q9P2E9 1410 aaKnown RBP17.52■□□□□ 0.39
PCCA-210ENST00000621936 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
PCCA-210ENST00000621936 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
PCCA-210ENST00000621936 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
PCCA-210ENST00000621936 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
PCCA-210ENST00000621936 NESP48681 1621 aa17.46■□□□□ 0.39
PCCA-210ENST00000621936 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.38
PCCA-210ENST00000621936 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
PCCA-210ENST00000621936 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
PCCA-210ENST00000621936 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
PCCA-210ENST00000621936 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
PCCA-210ENST00000621936 CUL7Q14999 1698 aa17.42■□□□□ 0.38
PCCA-210ENST00000621936 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
PCCA-210ENST00000621936 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
PCCA-210ENST00000621936 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
PCCA-210ENST00000621936 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
PCCA-210ENST00000621936 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
PCCA-210ENST00000621936 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 521.2 ms