RNA–Protein interactions for RNA: ENST00000619914.1

SYNRG-226, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-226ENST00000619914 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
SYNRG-226ENST00000619914 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
SYNRG-226ENST00000619914 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
SYNRG-226ENST00000619914 ABCC9O60706 1549 aa15.93■□□□□ 0.14
SYNRG-226ENST00000619914 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
SYNRG-226ENST00000619914 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
SYNRG-226ENST00000619914 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.03
SYNRG-226ENST00000619914 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
SYNRG-226ENST00000619914 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
SYNRG-226ENST00000619914 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
SYNRG-226ENST00000619914 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
SYNRG-226ENST00000619914 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
SYNRG-226ENST00000619914 NACADO15069 1562 aa14.65□□□□□ -0.06
SYNRG-226ENST00000619914 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
SYNRG-226ENST00000619914 POTEDQ86YR6 584 aa14.58□□□□□ -0.08
SYNRG-226ENST00000619914 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
SYNRG-226ENST00000619914 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
SYNRG-226ENST00000619914 CECR2Q9BXF3 1484 aa14.43□□□□□ -0.1
SYNRG-226ENST00000619914 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
SYNRG-226ENST00000619914 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
SYNRG-226ENST00000619914 CC2D2AQ9P2K1 1620 aa14.34□□□□□ -0.11
SYNRG-226ENST00000619914 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
SYNRG-226ENST00000619914 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
SYNRG-226ENST00000619914 FOXD1Q16676 465 aa14.21□□□□□ -0.13
SYNRG-226ENST00000619914 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
SYNRG-226ENST00000619914 CUX2O14529 1486 aa14.01□□□□□ -0.17
SYNRG-226ENST00000619914 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
SYNRG-226ENST00000619914 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
SYNRG-226ENST00000619914 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
SYNRG-226ENST00000619914 HRCP23327 699 aa13.83□□□□□ -0.2
SYNRG-226ENST00000619914 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
SYNRG-226ENST00000619914 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
SYNRG-226ENST00000619914 PCGF6Q9BYE7 350 aa13.67□□□□□ -0.22
SYNRG-226ENST00000619914 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
SYNRG-226ENST00000619914 NCAPD3P42695 1498 aa13.53□□□□□ -0.24
SYNRG-226ENST00000619914 TRIM26Q12899 539 aaPredicted RBP13.52□□□□□ -0.25
SYNRG-226ENST00000619914 NESP48681 1621 aa13.47□□□□□ -0.25
SYNRG-226ENST00000619914 MSH5O43196 834 aa13.47□□□□□ -0.25
SYNRG-226ENST00000619914 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
SYNRG-226ENST00000619914 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
SYNRG-226ENST00000619914 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
SYNRG-226ENST00000619914 ADRA2BP18089 450 aa13.4□□□□□ -0.26
SYNRG-226ENST00000619914 ATAD2BQ9ULI0 1458 aa13.39□□□□□ -0.27
SYNRG-226ENST00000619914 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
SYNRG-226ENST00000619914 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-226ENST00000619914 WIZO95785 1651 aa13.37□□□□□ -0.27
SYNRG-226ENST00000619914 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
SYNRG-226ENST00000619914 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
SYNRG-226ENST00000619914 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
SYNRG-226ENST00000619914 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
SYNRG-226ENST00000619914 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
SYNRG-226ENST00000619914 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
SYNRG-226ENST00000619914 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
SYNRG-226ENST00000619914 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
SYNRG-226ENST00000619914 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
SYNRG-226ENST00000619914 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
SYNRG-226ENST00000619914 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
SYNRG-226ENST00000619914 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
SYNRG-226ENST00000619914 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
SYNRG-226ENST00000619914 WDR62O43379 1518 aa13.15□□□□□ -0.3
SYNRG-226ENST00000619914 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
SYNRG-226ENST00000619914 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
SYNRG-226ENST00000619914 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
SYNRG-226ENST00000619914 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
SYNRG-226ENST00000619914 CADPSQ9ULU8 1353 aa13.11□□□□□ -0.31
SYNRG-226ENST00000619914 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
SYNRG-226ENST00000619914 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
SYNRG-226ENST00000619914 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
SYNRG-226ENST00000619914 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
SYNRG-226ENST00000619914 EEA1Q15075 1411 aa13.05□□□□□ -0.32
SYNRG-226ENST00000619914 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
SYNRG-226ENST00000619914 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
SYNRG-226ENST00000619914 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
SYNRG-226ENST00000619914 CYB5RLQ6IPT4 315 aa13.02□□□□□ -0.32
SYNRG-226ENST00000619914 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
SYNRG-226ENST00000619914 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
SYNRG-226ENST00000619914 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
SYNRG-226ENST00000619914 SOGA1O94964 1423 aa12.93□□□□□ -0.34
SYNRG-226ENST00000619914 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
SYNRG-226ENST00000619914 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
SYNRG-226ENST00000619914 CCER1Q8TC90 406 aaPredicted RBP12.87□□□□□ -0.35
SYNRG-226ENST00000619914 KIF21BO75037 1637 aa12.86□□□□□ -0.35
SYNRG-226ENST00000619914 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
SYNRG-226ENST00000619914 ARAP1Q96P48 1450 aa12.84□□□□□ -0.35
SYNRG-226ENST00000619914 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
SYNRG-226ENST00000619914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
SYNRG-226ENST00000619914 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
SYNRG-226ENST00000619914 CFTRP13569 1480 aa12.8□□□□□ -0.36
SYNRG-226ENST00000619914 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
SYNRG-226ENST00000619914 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
SYNRG-226ENST00000619914 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
SYNRG-226ENST00000619914 FBLN2P98095 1184 aa12.73□□□□□ -0.37
SYNRG-226ENST00000619914 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
SYNRG-226ENST00000619914 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
SYNRG-226ENST00000619914 CHD1O14646 1710 aa12.71□□□□□ -0.37
SYNRG-226ENST00000619914 CLIP1P30622 1438 aa12.71□□□□□ -0.37
SYNRG-226ENST00000619914 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
SYNRG-226ENST00000619914 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
SYNRG-226ENST00000619914 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
SYNRG-226ENST00000619914 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms