RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
SSX4B-202ENST00000619890 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
SSX4B-202ENST00000619890 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
SSX4B-202ENST00000619890 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
SSX4B-202ENST00000619890 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
SSX4B-202ENST00000619890 ABCC9O60706 1549 aa14.05□□□□□ -0.16
SSX4B-202ENST00000619890 FOXD1Q16676 465 aa13.94□□□□□ -0.18
SSX4B-202ENST00000619890 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
SSX4B-202ENST00000619890 CCDC180Q9P1Z9 1646 aa13.32□□□□□ -0.28
SSX4B-202ENST00000619890 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
SSX4B-202ENST00000619890 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
SSX4B-202ENST00000619890 MSH5O43196 834 aa13.14□□□□□ -0.31
SSX4B-202ENST00000619890 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSX4B-202ENST00000619890 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
SSX4B-202ENST00000619890 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
SSX4B-202ENST00000619890 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
SSX4B-202ENST00000619890 ADRA2BP18089 450 aa12.91□□□□□ -0.34
SSX4B-202ENST00000619890 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
SSX4B-202ENST00000619890 NACADO15069 1562 aa12.8□□□□□ -0.36
SSX4B-202ENST00000619890 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
SSX4B-202ENST00000619890 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
SSX4B-202ENST00000619890 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.37
SSX4B-202ENST00000619890 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
SSX4B-202ENST00000619890 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
SSX4B-202ENST00000619890 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
SSX4B-202ENST00000619890 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
SSX4B-202ENST00000619890 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
SSX4B-202ENST00000619890 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
SSX4B-202ENST00000619890 CUX2O14529 1486 aa12.34□□□□□ -0.43
SSX4B-202ENST00000619890 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
SSX4B-202ENST00000619890 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
SSX4B-202ENST00000619890 SCRIBQ14160 1630 aa12.15□□□□□ -0.46
SSX4B-202ENST00000619890 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
SSX4B-202ENST00000619890 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
SSX4B-202ENST00000619890 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
SSX4B-202ENST00000619890 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
SSX4B-202ENST00000619890 NESP48681 1621 aa11.89□□□□□ -0.51
SSX4B-202ENST00000619890 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
SSX4B-202ENST00000619890 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
SSX4B-202ENST00000619890 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
SSX4B-202ENST00000619890 ATAD2BQ9ULI0 1458 aa11.75□□□□□ -0.53
SSX4B-202ENST00000619890 SMARCA2P51531 1590 aa11.7□□□□□ -0.54
SSX4B-202ENST00000619890 HMGXB3Q12766 1538 aa11.66□□□□□ -0.54
SSX4B-202ENST00000619890 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
SSX4B-202ENST00000619890 LAMC3Q9Y6N6 1575 aa11.65□□□□□ -0.54
SSX4B-202ENST00000619890 BAZ1AQ9NRL2 1556 aaPredicted RBP11.63□□□□□ -0.55
SSX4B-202ENST00000619890 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
SSX4B-202ENST00000619890 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
SSX4B-202ENST00000619890 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
SSX4B-202ENST00000619890 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
SSX4B-202ENST00000619890 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
SSX4B-202ENST00000619890 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
SSX4B-202ENST00000619890 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
SSX4B-202ENST00000619890 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
SSX4B-202ENST00000619890 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
SSX4B-202ENST00000619890 SMARCA4P51532 1647 aa11.55□□□□□ -0.56
SSX4B-202ENST00000619890 WDR62O43379 1518 aa11.53□□□□□ -0.56
SSX4B-202ENST00000619890 CADPSQ9ULU8 1353 aa11.51□□□□□ -0.57
SSX4B-202ENST00000619890 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
SSX4B-202ENST00000619890 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
SSX4B-202ENST00000619890 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
SSX4B-202ENST00000619890 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
SSX4B-202ENST00000619890 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
SSX4B-202ENST00000619890 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
SSX4B-202ENST00000619890 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
SSX4B-202ENST00000619890 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
SSX4B-202ENST00000619890 FANCD2Q9BXW9 1451 aa11.34□□□□□ -0.59
SSX4B-202ENST00000619890 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
SSX4B-202ENST00000619890 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
SSX4B-202ENST00000619890 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
SSX4B-202ENST00000619890 WIZO95785 1651 aa11.28□□□□□ -0.6
SSX4B-202ENST00000619890 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.61
SSX4B-202ENST00000619890 CACNB1Q02641 598 aaPredicted RBP11.25□□□□□ -0.61
SSX4B-202ENST00000619890 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
SSX4B-202ENST00000619890 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.61
SSX4B-202ENST00000619890 CFTRP13569 1480 aa11.21□□□□□ -0.61
SSX4B-202ENST00000619890 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
SSX4B-202ENST00000619890 FBLN2P98095 1184 aa11.19□□□□□ -0.62
SSX4B-202ENST00000619890 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
SSX4B-202ENST00000619890 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
SSX4B-202ENST00000619890 AQRO60306 1485 aaKnown RBP eCLIP11.11□□□□□ -0.63
SSX4B-202ENST00000619890 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
SSX4B-202ENST00000619890 CHD1O14646 1710 aa11.09□□□□□ -0.63
SSX4B-202ENST00000619890 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
SSX4B-202ENST00000619890 KDM4FA0A1W2PPD8 638 aa11.06□□□□□ -0.64
SSX4B-202ENST00000619890 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
SSX4B-202ENST00000619890 TOPBP1Q92547 1522 aa11.04□□□□□ -0.64
SSX4B-202ENST00000619890 CLASP1Q7Z460 1538 aa11.02□□□□□ -0.65
SSX4B-202ENST00000619890 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
SSX4B-202ENST00000619890 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
SSX4B-202ENST00000619890 GAPVD1Q14C86 1478 aa11□□□□□ -0.65
SSX4B-202ENST00000619890 ABCC8Q09428 1581 aa10.98□□□□□ -0.65
SSX4B-202ENST00000619890 TARBP1Q13395 1621 aaKnown RBP10.97□□□□□ -0.65
SSX4B-202ENST00000619890 TDRD9Q8NDG6 1382 aaKnown RBP10.96□□□□□ -0.65
SSX4B-202ENST00000619890 NPM3O75607 178 aaKnown RBP10.96□□□□□ -0.65
SSX4B-202ENST00000619890 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
SSX4B-202ENST00000619890 SNAPC4Q5SXM2 1469 aa10.91□□□□□ -0.66
SSX4B-202ENST00000619890 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.66
SSX4B-202ENST00000619890 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
SSX4B-202ENST00000619890 RAD54L2Q9Y4B4 1467 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms