RNA–Protein interactions for RNA: ENST00000613219.4

PEX12-204, Transcript of peroxisomal biogenesis factor 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX12, Length 2,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX12-204ENST00000613219 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
PEX12-204ENST00000613219 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
PEX12-204ENST00000613219 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
PEX12-204ENST00000613219 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
PEX12-204ENST00000613219 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
PEX12-204ENST00000613219 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
PEX12-204ENST00000613219 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
PEX12-204ENST00000613219 ABCC9O60706 1549 aa19.24■□□□□ 0.67
PEX12-204ENST00000613219 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
PEX12-204ENST00000613219 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
PEX12-204ENST00000613219 NACADO15069 1562 aa18.86■□□□□ 0.61
PEX12-204ENST00000613219 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
PEX12-204ENST00000613219 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
PEX12-204ENST00000613219 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
PEX12-204ENST00000613219 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
PEX12-204ENST00000613219 PELP1Q8IZL8 1130 aaKnown RBP18.53■□□□□ 0.56
PEX12-204ENST00000613219 HRCP23327 699 aa18.52■□□□□ 0.56
PEX12-204ENST00000613219 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
PEX12-204ENST00000613219 PPARGC1BQ86YN6 1023 aaKnown RBP18.4■□□□□ 0.54
PEX12-204ENST00000613219 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
PEX12-204ENST00000613219 WIZO95785 1651 aa18.37■□□□□ 0.53
PEX12-204ENST00000613219 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
PEX12-204ENST00000613219 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
PEX12-204ENST00000613219 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
PEX12-204ENST00000613219 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
PEX12-204ENST00000613219 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
PEX12-204ENST00000613219 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
PEX12-204ENST00000613219 FAM9AQ8IZU1 332 aaPredicted RBP18.15■□□□□ 0.5
PEX12-204ENST00000613219 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
PEX12-204ENST00000613219 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.48
PEX12-204ENST00000613219 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
PEX12-204ENST00000613219 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
PEX12-204ENST00000613219 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
PEX12-204ENST00000613219 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
PEX12-204ENST00000613219 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
PEX12-204ENST00000613219 MYT1Q01538 1121 aa17.87■□□□□ 0.45
PEX12-204ENST00000613219 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
PEX12-204ENST00000613219 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
PEX12-204ENST00000613219 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
PEX12-204ENST00000613219 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
PEX12-204ENST00000613219 SOGA1O94964 1423 aa17.66■□□□□ 0.42
PEX12-204ENST00000613219 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
PEX12-204ENST00000613219 TRIM26Q12899 539 aaPredicted RBP17.59■□□□□ 0.41
PEX12-204ENST00000613219 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.4
PEX12-204ENST00000613219 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
PEX12-204ENST00000613219 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
PEX12-204ENST00000613219 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
PEX12-204ENST00000613219 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
PEX12-204ENST00000613219 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
PEX12-204ENST00000613219 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
PEX12-204ENST00000613219 EEA1Q15075 1411 aa17.36■□□□□ 0.37
PEX12-204ENST00000613219 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
PEX12-204ENST00000613219 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
PEX12-204ENST00000613219 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
PEX12-204ENST00000613219 CFTRP13569 1480 aa17.28■□□□□ 0.36
PEX12-204ENST00000613219 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
PEX12-204ENST00000613219 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
PEX12-204ENST00000613219 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.35
PEX12-204ENST00000613219 RANGAP1P46060 587 aaPredicted RBP17.26■□□□□ 0.35
PEX12-204ENST00000613219 CUX1P39880 1505 aa17.24■□□□□ 0.35
PEX12-204ENST00000613219 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
PEX12-204ENST00000613219 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
PEX12-204ENST00000613219 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
PEX12-204ENST00000613219 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
PEX12-204ENST00000613219 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
PEX12-204ENST00000613219 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
PEX12-204ENST00000613219 KIF21BO75037 1637 aa17.15■□□□□ 0.34
PEX12-204ENST00000613219 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.34
PEX12-204ENST00000613219 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
PEX12-204ENST00000613219 CLIP1P30622 1438 aa17.11■□□□□ 0.33
PEX12-204ENST00000613219 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
PEX12-204ENST00000613219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
PEX12-204ENST00000613219 NESP48681 1621 aa17.06■□□□□ 0.32
PEX12-204ENST00000613219 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
PEX12-204ENST00000613219 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
PEX12-204ENST00000613219 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
PEX12-204ENST00000613219 CUX2O14529 1486 aa17■□□□□ 0.31
PEX12-204ENST00000613219 PRDM2Q13029 1718 aa16.98■□□□□ 0.31
PEX12-204ENST00000613219 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
PEX12-204ENST00000613219 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
PEX12-204ENST00000613219 IGF1RP08069 1367 aa16.95■□□□□ 0.3
PEX12-204ENST00000613219 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
PEX12-204ENST00000613219 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
PEX12-204ENST00000613219 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
PEX12-204ENST00000613219 APLP2Q06481 763 aa16.89■□□□□ 0.29
PEX12-204ENST00000613219 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
PEX12-204ENST00000613219 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
PEX12-204ENST00000613219 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
PEX12-204ENST00000613219 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
PEX12-204ENST00000613219 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
PEX12-204ENST00000613219 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
PEX12-204ENST00000613219 CENPBP07199 599 aaPredicted RBP16.83■□□□□ 0.29
PEX12-204ENST00000613219 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
PEX12-204ENST00000613219 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
PEX12-204ENST00000613219 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
PEX12-204ENST00000613219 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
PEX12-204ENST00000613219 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.27
PEX12-204ENST00000613219 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
PEX12-204ENST00000613219 ABCA10Q8WWZ4 1543 aa16.74■□□□□ 0.27
PEX12-204ENST00000613219 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms