RNA–Protein interactions for RNA: ENST00000612614.1

NRDE2-209, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

Gene NRDE2, Length 3,538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-209ENST00000612614 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
NRDE2-209ENST00000612614 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
NRDE2-209ENST00000612614 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.94
NRDE2-209ENST00000612614 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
NRDE2-209ENST00000612614 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
NRDE2-209ENST00000612614 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
NRDE2-209ENST00000612614 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
NRDE2-209ENST00000612614 ABCC9O60706 1549 aa19.81■□□□□ 0.76
NRDE2-209ENST00000612614 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
NRDE2-209ENST00000612614 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
NRDE2-209ENST00000612614 MYO15BQ96JP2 1530 aa19.38■□□□□ 0.69
NRDE2-209ENST00000612614 NACADO15069 1562 aa19.33■□□□□ 0.69
NRDE2-209ENST00000612614 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
NRDE2-209ENST00000612614 LOC105371045A0A1W2PR82 267 aa19.18■□□□□ 0.66
NRDE2-209ENST00000612614 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
NRDE2-209ENST00000612614 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
NRDE2-209ENST00000612614 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
NRDE2-209ENST00000612614 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
NRDE2-209ENST00000612614 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
NRDE2-209ENST00000612614 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
NRDE2-209ENST00000612614 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
NRDE2-209ENST00000612614 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
NRDE2-209ENST00000612614 WIZO95785 1651 aa18.9■□□□□ 0.62
NRDE2-209ENST00000612614 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
NRDE2-209ENST00000612614 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
NRDE2-209ENST00000612614 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
NRDE2-209ENST00000612614 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
NRDE2-209ENST00000612614 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
NRDE2-209ENST00000612614 HRCP23327 699 aa18.55■□□□□ 0.56
NRDE2-209ENST00000612614 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
NRDE2-209ENST00000612614 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
NRDE2-209ENST00000612614 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
NRDE2-209ENST00000612614 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
NRDE2-209ENST00000612614 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
NRDE2-209ENST00000612614 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
NRDE2-209ENST00000612614 TTBK1Q5TCY1 1321 aaPredicted RBP18.3■□□□□ 0.52
NRDE2-209ENST00000612614 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
NRDE2-209ENST00000612614 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
NRDE2-209ENST00000612614 UBTFP17480 764 aaKnown RBP18.28■□□□□ 0.52
NRDE2-209ENST00000612614 SOGA1O94964 1423 aa18.28■□□□□ 0.52
NRDE2-209ENST00000612614 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
NRDE2-209ENST00000612614 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
NRDE2-209ENST00000612614 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
NRDE2-209ENST00000612614 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
NRDE2-209ENST00000612614 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
NRDE2-209ENST00000612614 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
NRDE2-209ENST00000612614 SYNJ1O43426 1573 aa18■□□□□ 0.47
NRDE2-209ENST00000612614 EEA1Q15075 1411 aa17.99■□□□□ 0.47
NRDE2-209ENST00000612614 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
NRDE2-209ENST00000612614 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
NRDE2-209ENST00000612614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
NRDE2-209ENST00000612614 GOLGA3Q08378 1498 aa17.92■□□□□ 0.46
NRDE2-209ENST00000612614 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
NRDE2-209ENST00000612614 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
NRDE2-209ENST00000612614 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
NRDE2-209ENST00000612614 HMGXB3Q12766 1538 aa17.83■□□□□ 0.44
NRDE2-209ENST00000612614 APLP2Q06481 763 aa17.81■□□□□ 0.44
NRDE2-209ENST00000612614 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
NRDE2-209ENST00000612614 CLIP1P30622 1438 aa17.79■□□□□ 0.44
NRDE2-209ENST00000612614 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
NRDE2-209ENST00000612614 CFTRP13569 1480 aa17.73■□□□□ 0.43
NRDE2-209ENST00000612614 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
NRDE2-209ENST00000612614 CUX1P39880 1505 aa17.71■□□□□ 0.43
NRDE2-209ENST00000612614 KIF21BO75037 1637 aa17.68■□□□□ 0.42
NRDE2-209ENST00000612614 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
NRDE2-209ENST00000612614 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
NRDE2-209ENST00000612614 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
NRDE2-209ENST00000612614 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
NRDE2-209ENST00000612614 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
NRDE2-209ENST00000612614 CUX2O14529 1486 aa17.58■□□□□ 0.41
NRDE2-209ENST00000612614 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
NRDE2-209ENST00000612614 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
NRDE2-209ENST00000612614 NESP48681 1621 aa17.52■□□□□ 0.4
NRDE2-209ENST00000612614 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
NRDE2-209ENST00000612614 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
NRDE2-209ENST00000612614 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
NRDE2-209ENST00000612614 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
NRDE2-209ENST00000612614 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
NRDE2-209ENST00000612614 IGF1RP08069 1367 aa17.49■□□□□ 0.39
NRDE2-209ENST00000612614 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
NRDE2-209ENST00000612614 CARMIL1Q5VZK9 1371 aa17.46■□□□□ 0.39
NRDE2-209ENST00000612614 ITGAEP38570 1179 aa17.44■□□□□ 0.38
NRDE2-209ENST00000612614 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
NRDE2-209ENST00000612614 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
NRDE2-209ENST00000612614 PRDM2Q13029 1718 aa17.36■□□□□ 0.37
NRDE2-209ENST00000612614 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
NRDE2-209ENST00000612614 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
NRDE2-209ENST00000612614 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
NRDE2-209ENST00000612614 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
NRDE2-209ENST00000612614 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
NRDE2-209ENST00000612614 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
NRDE2-209ENST00000612614 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
NRDE2-209ENST00000612614 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
NRDE2-209ENST00000612614 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
NRDE2-209ENST00000612614 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
NRDE2-209ENST00000612614 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
NRDE2-209ENST00000612614 FHOD3Q2V2M9 1422 aa17.19■□□□□ 0.34
NRDE2-209ENST00000612614 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
NRDE2-209ENST00000612614 CCNB3Q8WWL7 1395 aa17.17■□□□□ 0.34
NRDE2-209ENST00000612614 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms