RNA–Protein interactions for RNA: ENST00000607100.5

LINC00954-204, long intergenic non-protein coding RNA 954, humanhuman

TSL 2

Gene LINC00954, Length 2,239 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-204ENST00000607100 NISCHQ9Y2I1 1504 aa22.81■■□□□ 1.24
LINC00954-204ENST00000607100 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
LINC00954-204ENST00000607100 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
LINC00954-204ENST00000607100 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
LINC00954-204ENST00000607100 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
LINC00954-204ENST00000607100 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
LINC00954-204ENST00000607100 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
LINC00954-204ENST00000607100 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
LINC00954-204ENST00000607100 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
LINC00954-204ENST00000607100 SUPT5HO00267 1087 aaKnown RBP18.86■□□□□ 0.61
LINC00954-204ENST00000607100 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
LINC00954-204ENST00000607100 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
LINC00954-204ENST00000607100 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
LINC00954-204ENST00000607100 ABCC9O60706 1549 aa18.14■□□□□ 0.49
LINC00954-204ENST00000607100 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
LINC00954-204ENST00000607100 NACADO15069 1562 aa18.02■□□□□ 0.48
LINC00954-204ENST00000607100 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
LINC00954-204ENST00000607100 FOXD1Q16676 465 aa17.9■□□□□ 0.46
LINC00954-204ENST00000607100 CECR2Q9BXF3 1484 aa17.81■□□□□ 0.44
LINC00954-204ENST00000607100 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
LINC00954-204ENST00000607100 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
LINC00954-204ENST00000607100 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
LINC00954-204ENST00000607100 WIZO95785 1651 aa17.64■□□□□ 0.41
LINC00954-204ENST00000607100 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
LINC00954-204ENST00000607100 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
LINC00954-204ENST00000607100 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
LINC00954-204ENST00000607100 BAZ1AQ9NRL2 1556 aaPredicted RBP17.51■□□□□ 0.39
LINC00954-204ENST00000607100 HRCP23327 699 aa17.47■□□□□ 0.39
LINC00954-204ENST00000607100 FAM9AQ8IZU1 332 aaPredicted RBP17.42■□□□□ 0.38
LINC00954-204ENST00000607100 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
LINC00954-204ENST00000607100 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
LINC00954-204ENST00000607100 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
LINC00954-204ENST00000607100 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
LINC00954-204ENST00000607100 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00954-204ENST00000607100 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
LINC00954-204ENST00000607100 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.36
LINC00954-204ENST00000607100 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
LINC00954-204ENST00000607100 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
LINC00954-204ENST00000607100 ADRA2BP18089 450 aa17.19■□□□□ 0.34
LINC00954-204ENST00000607100 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
LINC00954-204ENST00000607100 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
LINC00954-204ENST00000607100 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
LINC00954-204ENST00000607100 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
LINC00954-204ENST00000607100 SOGA1O94964 1423 aa16.99■□□□□ 0.31
LINC00954-204ENST00000607100 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
LINC00954-204ENST00000607100 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
LINC00954-204ENST00000607100 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
LINC00954-204ENST00000607100 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
LINC00954-204ENST00000607100 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
LINC00954-204ENST00000607100 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
LINC00954-204ENST00000607100 EEA1Q15075 1411 aa16.85■□□□□ 0.29
LINC00954-204ENST00000607100 SYNJ1O43426 1573 aa16.83■□□□□ 0.29
LINC00954-204ENST00000607100 TNIKQ9UKE5 1360 aa16.82■□□□□ 0.28
LINC00954-204ENST00000607100 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
LINC00954-204ENST00000607100 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
LINC00954-204ENST00000607100 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
LINC00954-204ENST00000607100 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
LINC00954-204ENST00000607100 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
LINC00954-204ENST00000607100 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
LINC00954-204ENST00000607100 TTBK1Q5TCY1 1321 aaPredicted RBP16.66■□□□□ 0.26
LINC00954-204ENST00000607100 KIF21BO75037 1637 aa16.65■□□□□ 0.26
LINC00954-204ENST00000607100 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
LINC00954-204ENST00000607100 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
LINC00954-204ENST00000607100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
LINC00954-204ENST00000607100 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
LINC00954-204ENST00000607100 MSH5O43196 834 aa16.59■□□□□ 0.25
LINC00954-204ENST00000607100 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
LINC00954-204ENST00000607100 CLIP1P30622 1438 aa16.53■□□□□ 0.24
LINC00954-204ENST00000607100 CCER1Q8TC90 406 aaPredicted RBP16.53■□□□□ 0.24
LINC00954-204ENST00000607100 CFTRP13569 1480 aa16.51■□□□□ 0.23
LINC00954-204ENST00000607100 CUX1P39880 1505 aa16.51■□□□□ 0.23
LINC00954-204ENST00000607100 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
LINC00954-204ENST00000607100 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
LINC00954-204ENST00000607100 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
LINC00954-204ENST00000607100 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
LINC00954-204ENST00000607100 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
LINC00954-204ENST00000607100 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
LINC00954-204ENST00000607100 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
LINC00954-204ENST00000607100 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
LINC00954-204ENST00000607100 APLP2Q06481 763 aa16.32■□□□□ 0.2
LINC00954-204ENST00000607100 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
LINC00954-204ENST00000607100 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
LINC00954-204ENST00000607100 CUX2O14529 1486 aa16.25■□□□□ 0.19
LINC00954-204ENST00000607100 IGF1RP08069 1367 aa16.24■□□□□ 0.19
LINC00954-204ENST00000607100 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
LINC00954-204ENST00000607100 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
LINC00954-204ENST00000607100 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
LINC00954-204ENST00000607100 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
LINC00954-204ENST00000607100 CARMIL1Q5VZK9 1371 aa16.15■□□□□ 0.18
LINC00954-204ENST00000607100 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
LINC00954-204ENST00000607100 NESP48681 1621 aa16.13■□□□□ 0.17
LINC00954-204ENST00000607100 RAD54L2Q9Y4B4 1467 aa16.09■□□□□ 0.17
LINC00954-204ENST00000607100 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
LINC00954-204ENST00000607100 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
LINC00954-204ENST00000607100 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
LINC00954-204ENST00000607100 RRBP1Q9P2E9 1410 aaKnown RBP16.06■□□□□ 0.16
LINC00954-204ENST00000607100 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
LINC00954-204ENST00000607100 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
LINC00954-204ENST00000607100 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
LINC00954-204ENST00000607100 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms