RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
SRGAP2-209ENST00000604247 CCDC180Q9P1Z9 1646 aa23.29■■□□□ 1.32
SRGAP2-209ENST00000604247 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
SRGAP2-209ENST00000604247 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
SRGAP2-209ENST00000604247 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
SRGAP2-209ENST00000604247 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.21
SRGAP2-209ENST00000604247 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
SRGAP2-209ENST00000604247 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
SRGAP2-209ENST00000604247 ABCC9O60706 1549 aa21.88■■□□□ 1.09
SRGAP2-209ENST00000604247 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
SRGAP2-209ENST00000604247 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
SRGAP2-209ENST00000604247 NACADO15069 1562 aa21.61■■□□□ 1.05
SRGAP2-209ENST00000604247 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
SRGAP2-209ENST00000604247 LOC105371045A0A1W2PR82 267 aa21.36■■□□□ 1.01
SRGAP2-209ENST00000604247 CECR2Q9BXF3 1484 aa21.33■■□□□ 1.01
SRGAP2-209ENST00000604247 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
SRGAP2-209ENST00000604247 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
SRGAP2-209ENST00000604247 HRCP23327 699 aa21.26■□□□□ 0.99
SRGAP2-209ENST00000604247 MROH2BQ7Z745 1585 aa21.2■□□□□ 0.98
SRGAP2-209ENST00000604247 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
SRGAP2-209ENST00000604247 WIZO95785 1651 aa21.04■□□□□ 0.96
SRGAP2-209ENST00000604247 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
SRGAP2-209ENST00000604247 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
SRGAP2-209ENST00000604247 FAM9AQ8IZU1 332 aaPredicted RBP20.91■□□□□ 0.94
SRGAP2-209ENST00000604247 PPARGC1BQ86YN6 1023 aaKnown RBP20.87■□□□□ 0.93
SRGAP2-209ENST00000604247 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
SRGAP2-209ENST00000604247 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
SRGAP2-209ENST00000604247 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
SRGAP2-209ENST00000604247 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
SRGAP2-209ENST00000604247 EHMT2Q96KQ7 1210 aa20.76■□□□□ 0.91
SRGAP2-209ENST00000604247 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
SRGAP2-209ENST00000604247 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
SRGAP2-209ENST00000604247 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
SRGAP2-209ENST00000604247 SMARCA2P51531 1590 aa20.6■□□□□ 0.89
SRGAP2-209ENST00000604247 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
SRGAP2-209ENST00000604247 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
SRGAP2-209ENST00000604247 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
SRGAP2-209ENST00000604247 ZEB1P37275 1124 aaPredicted RBP20.35■□□□□ 0.85
SRGAP2-209ENST00000604247 BAZ1BQ9UIG0 1483 aaKnown RBP20.26■□□□□ 0.83
SRGAP2-209ENST00000604247 SOGA1O94964 1423 aa20.24■□□□□ 0.83
SRGAP2-209ENST00000604247 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
SRGAP2-209ENST00000604247 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
SRGAP2-209ENST00000604247 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
SRGAP2-209ENST00000604247 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
SRGAP2-209ENST00000604247 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
SRGAP2-209ENST00000604247 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.8
SRGAP2-209ENST00000604247 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.8
SRGAP2-209ENST00000604247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
SRGAP2-209ENST00000604247 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
SRGAP2-209ENST00000604247 EEA1Q15075 1411 aa20.05■□□□□ 0.8
SRGAP2-209ENST00000604247 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
SRGAP2-209ENST00000604247 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
SRGAP2-209ENST00000604247 CCER1Q8TC90 406 aaPredicted RBP19.99■□□□□ 0.79
SRGAP2-209ENST00000604247 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
SRGAP2-209ENST00000604247 TOP2BQ02880 1626 aa19.83■□□□□ 0.77
SRGAP2-209ENST00000604247 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.76
SRGAP2-209ENST00000604247 CFTRP13569 1480 aa19.8■□□□□ 0.76
SRGAP2-209ENST00000604247 KIF21BO75037 1637 aa19.8■□□□□ 0.76
SRGAP2-209ENST00000604247 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
SRGAP2-209ENST00000604247 CUX1P39880 1505 aa19.75■□□□□ 0.75
SRGAP2-209ENST00000604247 CLIP1P30622 1438 aa19.74■□□□□ 0.75
SRGAP2-209ENST00000604247 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
SRGAP2-209ENST00000604247 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
SRGAP2-209ENST00000604247 RANGAP1P46060 587 aaPredicted RBP19.7■□□□□ 0.74
SRGAP2-209ENST00000604247 VPS8Q8N3P4 1428 aa19.64■□□□□ 0.73
SRGAP2-209ENST00000604247 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
SRGAP2-209ENST00000604247 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
SRGAP2-209ENST00000604247 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
SRGAP2-209ENST00000604247 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
SRGAP2-209ENST00000604247 PRXQ9BXM0 1461 aa19.58■□□□□ 0.73
SRGAP2-209ENST00000604247 APLP2Q06481 763 aa19.58■□□□□ 0.73
SRGAP2-209ENST00000604247 PRDM2Q13029 1718 aa19.52■□□□□ 0.72
SRGAP2-209ENST00000604247 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
SRGAP2-209ENST00000604247 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
SRGAP2-209ENST00000604247 ZNF316A6NFI3 1004 aaPredicted RBP19.44■□□□□ 0.7
SRGAP2-209ENST00000604247 NESP48681 1621 aa19.44■□□□□ 0.7
SRGAP2-209ENST00000604247 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
SRGAP2-209ENST00000604247 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
SRGAP2-209ENST00000604247 FANCD2Q9BXW9 1451 aa19.42■□□□□ 0.7
SRGAP2-209ENST00000604247 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
SRGAP2-209ENST00000604247 CUX2O14529 1486 aa19.41■□□□□ 0.7
SRGAP2-209ENST00000604247 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
SRGAP2-209ENST00000604247 IGF1RP08069 1367 aa19.4■□□□□ 0.7
SRGAP2-209ENST00000604247 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
SRGAP2-209ENST00000604247 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
SRGAP2-209ENST00000604247 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
SRGAP2-209ENST00000604247 TOPBP1Q92547 1522 aa19.27■□□□□ 0.68
SRGAP2-209ENST00000604247 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
SRGAP2-209ENST00000604247 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
SRGAP2-209ENST00000604247 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
SRGAP2-209ENST00000604247 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
SRGAP2-209ENST00000604247 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
SRGAP2-209ENST00000604247 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
SRGAP2-209ENST00000604247 DHX57Q6P158 1386 aaKnown RBP19.2■□□□□ 0.66
SRGAP2-209ENST00000604247 MIER1Q8N108 512 aa19.19■□□□□ 0.66
SRGAP2-209ENST00000604247 GTF3C3Q9Y5Q9 886 aa19.19■□□□□ 0.66
SRGAP2-209ENST00000604247 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
SRGAP2-209ENST00000604247 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
SRGAP2-209ENST00000604247 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
SRGAP2-209ENST00000604247 YTHDC1Q96MU7 727 aaKnown RBP19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms