RNA–Protein interactions for RNA: ENST00000600553.5

FENDRR-207, FOXF1 adjacent non-coding developmental regulatory RNA, humanhuman

TSL 3

Gene FENDRR, Length 355 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FENDRR-207ENST00000600553 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
FENDRR-207ENST00000600553 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
FENDRR-207ENST00000600553 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
FENDRR-207ENST00000600553 PHF23Q9BUL5 403 aaPredicted RBP18.36■□□□□ 0.53
FENDRR-207ENST00000600553 FOXD1Q16676 465 aa17.42■□□□□ 0.38
FENDRR-207ENST00000600553 NISCHQ9Y2I1 1504 aa17.1■□□□□ 0.33
FENDRR-207ENST00000600553 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
FENDRR-207ENST00000600553 MSH5O43196 834 aa16.44■□□□□ 0.22
FENDRR-207ENST00000600553 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
FENDRR-207ENST00000600553 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
FENDRR-207ENST00000600553 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
FENDRR-207ENST00000600553 ADRA2BP18089 450 aa15.97■□□□□ 0.15
FENDRR-207ENST00000600553 ABCC9O60706 1549 aa15.84■□□□□ 0.13
FENDRR-207ENST00000600553 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
FENDRR-207ENST00000600553 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
FENDRR-207ENST00000600553 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
FENDRR-207ENST00000600553 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
FENDRR-207ENST00000600553 NACADO15069 1562 aa14.75□□□□□ -0.05
FENDRR-207ENST00000600553 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
FENDRR-207ENST00000600553 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
FENDRR-207ENST00000600553 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
FENDRR-207ENST00000600553 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
FENDRR-207ENST00000600553 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
FENDRR-207ENST00000600553 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
FENDRR-207ENST00000600553 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
FENDRR-207ENST00000600553 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
FENDRR-207ENST00000600553 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.11
FENDRR-207ENST00000600553 CECR2Q9BXF3 1484 aa14.3□□□□□ -0.12
FENDRR-207ENST00000600553 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
FENDRR-207ENST00000600553 DCAF8L1A6NGE4 600 aa14.22□□□□□ -0.13
FENDRR-207ENST00000600553 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
FENDRR-207ENST00000600553 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
FENDRR-207ENST00000600553 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
FENDRR-207ENST00000600553 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
FENDRR-207ENST00000600553 PPP4R3CPQ6ZMV5 832 aa14.09□□□□□ -0.15
FENDRR-207ENST00000600553 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
FENDRR-207ENST00000600553 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
FENDRR-207ENST00000600553 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
FENDRR-207ENST00000600553 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
FENDRR-207ENST00000600553 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
FENDRR-207ENST00000600553 CUX2O14529 1486 aa13.8□□□□□ -0.2
FENDRR-207ENST00000600553 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
FENDRR-207ENST00000600553 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
FENDRR-207ENST00000600553 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
FENDRR-207ENST00000600553 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
FENDRR-207ENST00000600553 HMGXB3Q12766 1538 aa13.52□□□□□ -0.25
FENDRR-207ENST00000600553 NESP48681 1621 aa13.51□□□□□ -0.25
FENDRR-207ENST00000600553 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
FENDRR-207ENST00000600553 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
FENDRR-207ENST00000600553 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
FENDRR-207ENST00000600553 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
FENDRR-207ENST00000600553 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
FENDRR-207ENST00000600553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
FENDRR-207ENST00000600553 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
FENDRR-207ENST00000600553 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
FENDRR-207ENST00000600553 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
FENDRR-207ENST00000600553 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
FENDRR-207ENST00000600553 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
FENDRR-207ENST00000600553 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
FENDRR-207ENST00000600553 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
FENDRR-207ENST00000600553 WDR62O43379 1518 aa13.22□□□□□ -0.29
FENDRR-207ENST00000600553 MRC2Q9UBG0 1479 aa13.22□□□□□ -0.29
FENDRR-207ENST00000600553 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
FENDRR-207ENST00000600553 CADPSQ9ULU8 1353 aa13.11□□□□□ -0.31
FENDRR-207ENST00000600553 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
FENDRR-207ENST00000600553 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
FENDRR-207ENST00000600553 WIZO95785 1651 aa13.05□□□□□ -0.32
FENDRR-207ENST00000600553 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
FENDRR-207ENST00000600553 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
FENDRR-207ENST00000600553 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
FENDRR-207ENST00000600553 CAPN15O75808 1086 aa13.03□□□□□ -0.32
FENDRR-207ENST00000600553 FANCD2Q9BXW9 1451 aa13.03□□□□□ -0.32
FENDRR-207ENST00000600553 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
FENDRR-207ENST00000600553 DSG3P32926 999 aa12.99□□□□□ -0.33
FENDRR-207ENST00000600553 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
FENDRR-207ENST00000600553 POTEHQ6S545 545 aa12.97□□□□□ -0.33
FENDRR-207ENST00000600553 PRDM2Q13029 1718 aa12.96□□□□□ -0.33
FENDRR-207ENST00000600553 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.33
FENDRR-207ENST00000600553 CFTRP13569 1480 aa12.93□□□□□ -0.34
FENDRR-207ENST00000600553 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
FENDRR-207ENST00000600553 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
FENDRR-207ENST00000600553 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
FENDRR-207ENST00000600553 CHD1O14646 1710 aa12.85□□□□□ -0.35
FENDRR-207ENST00000600553 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
FENDRR-207ENST00000600553 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
FENDRR-207ENST00000600553 ARAP1Q96P48 1450 aa12.77□□□□□ -0.37
FENDRR-207ENST00000600553 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
FENDRR-207ENST00000600553 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
FENDRR-207ENST00000600553 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
FENDRR-207ENST00000600553 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
FENDRR-207ENST00000600553 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
FENDRR-207ENST00000600553 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
FENDRR-207ENST00000600553 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
FENDRR-207ENST00000600553 KCNA4P22459 653 aa12.7□□□□□ -0.38
FENDRR-207ENST00000600553 APLP2Q06481 763 aa12.7□□□□□ -0.38
FENDRR-207ENST00000600553 ABCB7O75027 752 aa12.69□□□□□ -0.38
FENDRR-207ENST00000600553 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
FENDRR-207ENST00000600553 ABCC8Q09428 1581 aa12.67□□□□□ -0.38
FENDRR-207ENST00000600553 CCDC88BA6NC98 1476 aa12.64□□□□□ -0.39
FENDRR-207ENST00000600553 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms