RNA–Protein interactions for RNA: ENST00000599019.5

PRKD2-212, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-212ENST00000599019 NISCHQ9Y2I1 1504 aa45.58■■■■■ 4.89
PRKD2-212ENST00000599019 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
PRKD2-212ENST00000599019 ABCC9O60706 1549 aa38.96■■■■□ 3.83
PRKD2-212ENST00000599019 ZCCHC6Q5VYS8 1495 aaKnown RBP38.51■■■■□ 3.75
PRKD2-212ENST00000599019 DCAF1Q9Y4B6 1507 aa37.78■■■■□ 3.64
PRKD2-212ENST00000599019 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
PRKD2-212ENST00000599019 RB1CC1Q8TDY2 1594 aa37.42■■■■□ 3.58
PRKD2-212ENST00000599019 NACADO15069 1562 aa37.36■■■■□ 3.57
PRKD2-212ENST00000599019 DCAF8L2P0C7V8 631 aa37.32■■■■□ 3.56
PRKD2-212ENST00000599019 MYO15BQ96JP2 1530 aa37.12■■■■□ 3.53
PRKD2-212ENST00000599019 SUPT5HO00267 1087 aaKnown RBP36.9■■■■□ 3.5
PRKD2-212ENST00000599019 UNC13AQ9UPW8 1703 aa36.6■■■■□ 3.45
PRKD2-212ENST00000599019 PABPN1Q86U42 306 aaKnown RBP eCLIP36.42■■■■□ 3.42
PRKD2-212ENST00000599019 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
PRKD2-212ENST00000599019 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
PRKD2-212ENST00000599019 DNAJC5BQ9UF47 199 aa35.95■■■■□ 3.35
PRKD2-212ENST00000599019 CHIC1Q5VXU3 224 aa35.91■■■■□ 3.34
PRKD2-212ENST00000599019 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
PRKD2-212ENST00000599019 EIF4G1Q04637 1599 aaKnown RBP35.36■■■■□ 3.25
PRKD2-212ENST00000599019 CECR2Q9BXF3 1484 aa35.26■■■■□ 3.24
PRKD2-212ENST00000599019 CC2D2AQ9P2K1 1620 aa35.25■■■■□ 3.23
PRKD2-212ENST00000599019 MROH2BQ7Z745 1585 aa35.21■■■■□ 3.23
PRKD2-212ENST00000599019 BAZ1AQ9NRL2 1556 aaPredicted RBP35.15■■■■□ 3.22
PRKD2-212ENST00000599019 WIZO95785 1651 aa34.96■■■■□ 3.19
PRKD2-212ENST00000599019 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
PRKD2-212ENST00000599019 TOP2AP11388 1531 aaKnown RBP34.7■■■■□ 3.15
PRKD2-212ENST00000599019 TRIM41Q8WV44 630 aa34.69■■■■□ 3.14
PRKD2-212ENST00000599019 NCAPD3P42695 1498 aa34.51■■■■□ 3.11
PRKD2-212ENST00000599019 LOC105371045A0A1W2PR82 267 aa34.5■■■■□ 3.11
PRKD2-212ENST00000599019 ATAD2BQ9ULI0 1458 aa34.49■■■■□ 3.11
PRKD2-212ENST00000599019 SMARCA2P51531 1590 aa34.42■■■■□ 3.1
PRKD2-212ENST00000599019 PEG3Q9GZU2 1588 aa34.39■■■■□ 3.1
PRKD2-212ENST00000599019 CCDC88BA6NC98 1476 aa34.33■■■■□ 3.09
PRKD2-212ENST00000599019 HMGXB3Q12766 1538 aa34.28■■■■□ 3.08
PRKD2-212ENST00000599019 BAZ1BQ9UIG0 1483 aaKnown RBP34.18■■■■□ 3.06
PRKD2-212ENST00000599019 PCGF6Q9BYE7 350 aa34.07■■■■□ 3.04
PRKD2-212ENST00000599019 HRCP23327 699 aa34.01■■■■□ 3.04
PRKD2-212ENST00000599019 FAM9AQ8IZU1 332 aaPredicted RBP33.99■■■■□ 3.03
PRKD2-212ENST00000599019 TRIM26Q12899 539 aaPredicted RBP33.92■■■■□ 3.02
PRKD2-212ENST00000599019 ABCC8Q09428 1581 aa33.88■■■■□ 3.01
PRKD2-212ENST00000599019 EEA1Q15075 1411 aa33.81■■■■□ 3
PRKD2-212ENST00000599019 NESP48681 1621 aa33.7■■■□□ 2.99
PRKD2-212ENST00000599019 WRNQ14191 1432 aaPredicted RBP eCLIP33.64■■■□□ 2.97
PRKD2-212ENST00000599019 LAMC3Q9Y6N6 1575 aa33.59■■■□□ 2.97
PRKD2-212ENST00000599019 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
PRKD2-212ENST00000599019 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
PRKD2-212ENST00000599019 SOGA1O94964 1423 aa33.48■■■□□ 2.95
PRKD2-212ENST00000599019 CSRNP3Q8WYN3 585 aa33.42■■■□□ 2.94
PRKD2-212ENST00000599019 TNIKQ9UKE5 1360 aa33.42■■■□□ 2.94
PRKD2-212ENST00000599019 SYNJ1O43426 1573 aa33.39■■■□□ 2.94
PRKD2-212ENST00000599019 EHMT2Q96KQ7 1210 aa33.38■■■□□ 2.93
PRKD2-212ENST00000599019 PDS5BQ9NTI5 1447 aa33.36■■■□□ 2.93
PRKD2-212ENST00000599019 GOLGA3Q08378 1498 aa33.31■■■□□ 2.92
PRKD2-212ENST00000599019 CUX2O14529 1486 aa33.28■■■□□ 2.92
PRKD2-212ENST00000599019 KIF21AQ7Z4S6 1674 aa33.28■■■□□ 2.92
PRKD2-212ENST00000599019 CFTRP13569 1480 aa33.26■■■□□ 2.92
PRKD2-212ENST00000599019 CEP162Q5TB80 1403 aa33.26■■■□□ 2.91
PRKD2-212ENST00000599019 RUSC2Q8N2Y8 1516 aa33.25■■■□□ 2.91
PRKD2-212ENST00000599019 TOP2BQ02880 1626 aa33.25■■■□□ 2.91
PRKD2-212ENST00000599019 KIF21BO75037 1637 aa33.24■■■□□ 2.91
PRKD2-212ENST00000599019 ZEB1P37275 1124 aaPredicted RBP33.22■■■□□ 2.91
PRKD2-212ENST00000599019 CEP164Q9UPV0 1460 aa33.22■■■□□ 2.91
PRKD2-212ENST00000599019 THOC2Q8NI27 1593 aaKnown RBP33.2■■■□□ 2.9
PRKD2-212ENST00000599019 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.9
PRKD2-212ENST00000599019 FANCD2Q9BXW9 1451 aa33.08■■■□□ 2.89
PRKD2-212ENST00000599019 UBTFP17480 764 aaKnown RBP33.05■■■□□ 2.88
PRKD2-212ENST00000599019 MRC2Q9UBG0 1479 aa33.02■■■□□ 2.88
PRKD2-212ENST00000599019 PRDM2Q13029 1718 aa32.98■■■□□ 2.87
PRKD2-212ENST00000599019 WDR62O43379 1518 aa32.93■■■□□ 2.86
PRKD2-212ENST00000599019 PPARGC1BQ86YN6 1023 aaKnown RBP32.88■■■□□ 2.85
PRKD2-212ENST00000599019 CUX1P39880 1505 aa32.86■■■□□ 2.85
PRKD2-212ENST00000599019 ERICH3Q5RHP9 1530 aa32.84■■■□□ 2.85
PRKD2-212ENST00000599019 CLIP1P30622 1438 aa32.78■■■□□ 2.84
PRKD2-212ENST00000599019 RAPGEF2Q9Y4G8 1499 aa32.77■■■□□ 2.84
PRKD2-212ENST00000599019 URB2Q14146 1524 aaKnown RBP32.76■■■□□ 2.84
PRKD2-212ENST00000599019 PRXQ9BXM0 1461 aa32.74■■■□□ 2.83
PRKD2-212ENST00000599019 KIF27Q86VH2 1401 aa32.73■■■□□ 2.83
PRKD2-212ENST00000599019 VPS8Q8N3P4 1428 aa32.67■■■□□ 2.82
PRKD2-212ENST00000599019 TOPBP1Q92547 1522 aa32.54■■■□□ 2.8
PRKD2-212ENST00000599019 DNMBPQ6XZF7 1577 aa32.48■■■□□ 2.79
PRKD2-212ENST00000599019 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
PRKD2-212ENST00000599019 APLP2Q06481 763 aa32.41■■■□□ 2.78
PRKD2-212ENST00000599019 CCER1Q8TC90 406 aaPredicted RBP32.37■■■□□ 2.77
PRKD2-212ENST00000599019 IFT140Q96RY7 1462 aa32.36■■■□□ 2.77
PRKD2-212ENST00000599019 FGD5Q6ZNL6 1462 aa32.35■■■□□ 2.77
PRKD2-212ENST00000599019 ARAP1Q96P48 1450 aa32.3■■■□□ 2.76
PRKD2-212ENST00000599019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.28■■■□□ 2.76
PRKD2-212ENST00000599019 IGF1RP08069 1367 aa32.27■■■□□ 2.76
PRKD2-212ENST00000599019 TTBK1Q5TCY1 1321 aaPredicted RBP32.26■■■□□ 2.76
PRKD2-212ENST00000599019 POLA1P09884 1462 aaPredicted RBP32.26■■■□□ 2.75
PRKD2-212ENST00000599019 ZNF608Q9ULD9 1512 aaPredicted RBP32.24■■■□□ 2.75
PRKD2-212ENST00000599019 TARBP1Q13395 1621 aaKnown RBP32.21■■■□□ 2.75
PRKD2-212ENST00000599019 CARMIL1Q5VZK9 1371 aa32.15■■■□□ 2.74
PRKD2-212ENST00000599019 ABCA10Q8WWZ4 1543 aa32.15■■■□□ 2.74
PRKD2-212ENST00000599019 RAD54L2Q9Y4B4 1467 aa32.12■■■□□ 2.73
PRKD2-212ENST00000599019 ARHGAP35Q9NRY4 1499 aa32.11■■■□□ 2.73
PRKD2-212ENST00000599019 RANGAP1P46060 587 aaPredicted RBP32.08■■■□□ 2.73
PRKD2-212ENST00000599019 EIF4G3O43432 1585 aaKnown RBP32.08■■■□□ 2.73
PRKD2-212ENST00000599019 AQRO60306 1485 aaKnown RBP eCLIP32.05■■■□□ 2.721e-7■■■□□ 17
PRKD2-212ENST00000599019 CUL7Q14999 1698 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms