RNA–Protein interactions for RNA: ENST00000596894.5

ZNF546-204, Transcript of zinc finger protein 546, humanhuman

TSL 3 BASIC

Gene ZNF546, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-204ENST00000596894 AEBP2Q6ZN18 517 aaPredicted RBP28■■■□□ 2.07
ZNF546-204ENST00000596894 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
ZNF546-204ENST00000596894 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
ZNF546-204ENST00000596894 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
ZNF546-204ENST00000596894 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
ZNF546-204ENST00000596894 FOXD1Q16676 465 aa22.17■■□□□ 1.14
ZNF546-204ENST00000596894 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
ZNF546-204ENST00000596894 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
ZNF546-204ENST00000596894 ADRA2BP18089 450 aa20.89■□□□□ 0.93
ZNF546-204ENST00000596894 PIAS4Q8N2W9 510 aaPredicted RBP20.74■□□□□ 0.91
ZNF546-204ENST00000596894 MSH5O43196 834 aa20.59■□□□□ 0.89
ZNF546-204ENST00000596894 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
ZNF546-204ENST00000596894 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
ZNF546-204ENST00000596894 ABCC9O60706 1549 aa19.53■□□□□ 0.72
ZNF546-204ENST00000596894 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
ZNF546-204ENST00000596894 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
ZNF546-204ENST00000596894 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
ZNF546-204ENST00000596894 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
ZNF546-204ENST00000596894 NACADO15069 1562 aa19.19■□□□□ 0.66
ZNF546-204ENST00000596894 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
ZNF546-204ENST00000596894 RB1CC1Q8TDY2 1594 aa19.11■□□□□ 0.65
ZNF546-204ENST00000596894 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
ZNF546-204ENST00000596894 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
ZNF546-204ENST00000596894 PPP4R3CPQ6ZMV5 832 aa18.91■□□□□ 0.62
ZNF546-204ENST00000596894 SCRIBQ14160 1630 aa18.64■□□□□ 0.57
ZNF546-204ENST00000596894 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
ZNF546-204ENST00000596894 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
ZNF546-204ENST00000596894 CNKSR2Q8WXI2 1034 aa18.48■□□□□ 0.55
ZNF546-204ENST00000596894 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
ZNF546-204ENST00000596894 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
ZNF546-204ENST00000596894 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
ZNF546-204ENST00000596894 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
ZNF546-204ENST00000596894 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
ZNF546-204ENST00000596894 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
ZNF546-204ENST00000596894 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
ZNF546-204ENST00000596894 NPM3O75607 178 aaKnown RBP18.01■□□□□ 0.47
ZNF546-204ENST00000596894 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
ZNF546-204ENST00000596894 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
ZNF546-204ENST00000596894 KCNA4P22459 653 aa17.9■□□□□ 0.46
ZNF546-204ENST00000596894 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
ZNF546-204ENST00000596894 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
ZNF546-204ENST00000596894 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
ZNF546-204ENST00000596894 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
ZNF546-204ENST00000596894 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
ZNF546-204ENST00000596894 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
ZNF546-204ENST00000596894 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
ZNF546-204ENST00000596894 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
ZNF546-204ENST00000596894 WIZO95785 1651 aa17.66■□□□□ 0.42
ZNF546-204ENST00000596894 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
ZNF546-204ENST00000596894 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
ZNF546-204ENST00000596894 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
ZNF546-204ENST00000596894 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
ZNF546-204ENST00000596894 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
ZNF546-204ENST00000596894 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
ZNF546-204ENST00000596894 CACNB1Q02641 598 aaPredicted RBP17.52■□□□□ 0.4
ZNF546-204ENST00000596894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
ZNF546-204ENST00000596894 C1QBPQ07021 282 aaKnown RBP17.37■□□□□ 0.37
ZNF546-204ENST00000596894 CCDC88BA6NC98 1476 aa17.32■□□□□ 0.36
ZNF546-204ENST00000596894 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
ZNF546-204ENST00000596894 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
ZNF546-204ENST00000596894 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
ZNF546-204ENST00000596894 CFTRP13569 1480 aa17.13■□□□□ 0.33
ZNF546-204ENST00000596894 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
ZNF546-204ENST00000596894 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
ZNF546-204ENST00000596894 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
ZNF546-204ENST00000596894 NESP48681 1621 aa16.97■□□□□ 0.31
ZNF546-204ENST00000596894 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
ZNF546-204ENST00000596894 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
ZNF546-204ENST00000596894 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
ZNF546-204ENST00000596894 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
ZNF546-204ENST00000596894 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
ZNF546-204ENST00000596894 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
ZNF546-204ENST00000596894 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
ZNF546-204ENST00000596894 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
ZNF546-204ENST00000596894 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
ZNF546-204ENST00000596894 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
ZNF546-204ENST00000596894 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
ZNF546-204ENST00000596894 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
ZNF546-204ENST00000596894 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
ZNF546-204ENST00000596894 CAPN15O75808 1086 aa16.73■□□□□ 0.27
ZNF546-204ENST00000596894 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
ZNF546-204ENST00000596894 WDR62O43379 1518 aa16.7■□□□□ 0.26
ZNF546-204ENST00000596894 CUX1P39880 1505 aa16.7■□□□□ 0.26
ZNF546-204ENST00000596894 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
ZNF546-204ENST00000596894 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
ZNF546-204ENST00000596894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
ZNF546-204ENST00000596894 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
ZNF546-204ENST00000596894 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
ZNF546-204ENST00000596894 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
ZNF546-204ENST00000596894 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
ZNF546-204ENST00000596894 DSG3P32926 999 aa16.61■□□□□ 0.25
ZNF546-204ENST00000596894 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
ZNF546-204ENST00000596894 APLP2Q06481 763 aa16.59■□□□□ 0.25
ZNF546-204ENST00000596894 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
ZNF546-204ENST00000596894 SOGA1O94964 1423 aa16.59■□□□□ 0.25
ZNF546-204ENST00000596894 CUX2O14529 1486 aa16.59■□□□□ 0.25
ZNF546-204ENST00000596894 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
ZNF546-204ENST00000596894 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
ZNF546-204ENST00000596894 EEA1Q15075 1411 aa16.56■□□□□ 0.24
ZNF546-204ENST00000596894 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms