RNA–Protein interactions for RNA: ENST00000596677.5

ZNF544-207, Transcript of zinc finger protein 544, humanhuman

TSL 5

Gene ZNF544, Length 4,109 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-207ENST00000596677 NISCHQ9Y2I1 1504 aa14.83□□□□□ -0.04
ZNF544-207ENST00000596677 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
ZNF544-207ENST00000596677 CCDC180Q9P1Z9 1646 aa12.86□□□□□ -0.35
ZNF544-207ENST00000596677 ABCC9O60706 1549 aa12.8□□□□□ -0.36
ZNF544-207ENST00000596677 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
ZNF544-207ENST00000596677 ZCCHC6Q5VYS8 1495 aaKnown RBP12.33□□□□□ -0.44
ZNF544-207ENST00000596677 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
ZNF544-207ENST00000596677 NACADO15069 1562 aa12.23□□□□□ -0.45
ZNF544-207ENST00000596677 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
ZNF544-207ENST00000596677 DCAF1Q9Y4B6 1507 aa12.13□□□□□ -0.47
ZNF544-207ENST00000596677 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.48
ZNF544-207ENST00000596677 SCRIBQ14160 1630 aa12.02□□□□□ -0.48
ZNF544-207ENST00000596677 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
ZNF544-207ENST00000596677 HRCP23327 699 aa11.76□□□□□ -0.53
ZNF544-207ENST00000596677 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
ZNF544-207ENST00000596677 BICRAQ9NZM4 1560 aa11.61□□□□□ -0.55
ZNF544-207ENST00000596677 PCGF6Q9BYE7 350 aa11.6□□□□□ -0.55
ZNF544-207ENST00000596677 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
ZNF544-207ENST00000596677 UNC13AQ9UPW8 1703 aa11.54□□□□□ -0.56
ZNF544-207ENST00000596677 BAZ1AQ9NRL2 1556 aaPredicted RBP11.53□□□□□ -0.56
ZNF544-207ENST00000596677 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
ZNF544-207ENST00000596677 RSF1Q96T23 1441 aaPredicted RBP11.47□□□□□ -0.57
ZNF544-207ENST00000596677 EIF4G1Q04637 1599 aaKnown RBP11.46□□□□□ -0.58
ZNF544-207ENST00000596677 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
ZNF544-207ENST00000596677 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
ZNF544-207ENST00000596677 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
ZNF544-207ENST00000596677 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
ZNF544-207ENST00000596677 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
ZNF544-207ENST00000596677 SMARCA4P51532 1647 aa11.39□□□□□ -0.59
ZNF544-207ENST00000596677 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
ZNF544-207ENST00000596677 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
ZNF544-207ENST00000596677 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
ZNF544-207ENST00000596677 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
ZNF544-207ENST00000596677 WIZO95785 1651 aa11.27□□□□□ -0.61
ZNF544-207ENST00000596677 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
ZNF544-207ENST00000596677 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
ZNF544-207ENST00000596677 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
ZNF544-207ENST00000596677 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
ZNF544-207ENST00000596677 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
ZNF544-207ENST00000596677 ERCC6Q03468 1493 aa11.16□□□□□ -0.62
ZNF544-207ENST00000596677 ZEB1P37275 1124 aaPredicted RBP11.16□□□□□ -0.62
ZNF544-207ENST00000596677 CADPSQ9ULU8 1353 aa11.15□□□□□ -0.62
ZNF544-207ENST00000596677 PEG3Q9GZU2 1588 aa11.12□□□□□ -0.63
ZNF544-207ENST00000596677 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
ZNF544-207ENST00000596677 FAM9AQ8IZU1 332 aaPredicted RBP11.06□□□□□ -0.64
ZNF544-207ENST00000596677 NESP48681 1621 aa11.02□□□□□ -0.65
ZNF544-207ENST00000596677 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
ZNF544-207ENST00000596677 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
ZNF544-207ENST00000596677 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
ZNF544-207ENST00000596677 CFTRP13569 1480 aa10.98□□□□□ -0.65
ZNF544-207ENST00000596677 CEP164Q9UPV0 1460 aa10.98□□□□□ -0.65
ZNF544-207ENST00000596677 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.669e-6■■■■■ 50.1
ZNF544-207ENST00000596677 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
ZNF544-207ENST00000596677 FBLN2P98095 1184 aa10.92□□□□□ -0.66
ZNF544-207ENST00000596677 ABCC8Q09428 1581 aa10.86□□□□□ -0.67
ZNF544-207ENST00000596677 UBTFP17480 764 aaKnown RBP10.86□□□□□ -0.67
ZNF544-207ENST00000596677 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
ZNF544-207ENST00000596677 SOGA1O94964 1423 aa10.84□□□□□ -0.67
ZNF544-207ENST00000596677 RANGAP1P46060 587 aaPredicted RBP10.83□□□□□ -0.68
ZNF544-207ENST00000596677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
ZNF544-207ENST00000596677 CCER1Q8TC90 406 aaPredicted RBP10.8□□□□□ -0.68
ZNF544-207ENST00000596677 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
ZNF544-207ENST00000596677 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
ZNF544-207ENST00000596677 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
ZNF544-207ENST00000596677 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
ZNF544-207ENST00000596677 TDRD9Q8NDG6 1382 aaKnown RBP10.79□□□□□ -0.68
ZNF544-207ENST00000596677 NEUROD1Q13562 356 aa10.77□□□□□ -0.69
ZNF544-207ENST00000596677 KIF27Q86VH2 1401 aa10.76□□□□□ -0.69
ZNF544-207ENST00000596677 CUX2O14529 1486 aa10.76□□□□□ -0.69
ZNF544-207ENST00000596677 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
ZNF544-207ENST00000596677 FGD5Q6ZNL6 1462 aa10.75□□□□□ -0.69
ZNF544-207ENST00000596677 DIEXFQ68CQ4 756 aaKnown RBP10.73□□□□□ -0.69
ZNF544-207ENST00000596677 URB2Q14146 1524 aaKnown RBP10.72□□□□□ -0.69
ZNF544-207ENST00000596677 RAD54L2Q9Y4B4 1467 aa10.72□□□□□ -0.69
ZNF544-207ENST00000596677 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
ZNF544-207ENST00000596677 IFT140Q96RY7 1462 aa10.7□□□□□ -0.7
ZNF544-207ENST00000596677 CUX1P39880 1505 aa10.7□□□□□ -0.7
ZNF544-207ENST00000596677 POLA1P09884 1462 aaPredicted RBP10.69□□□□□ -0.7
ZNF544-207ENST00000596677 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
ZNF544-207ENST00000596677 GTF3C3Q9Y5Q9 886 aa10.68□□□□□ -0.7
ZNF544-207ENST00000596677 KIF21AQ7Z4S6 1674 aa10.68□□□□□ -0.7
ZNF544-207ENST00000596677 ATP1B4Q9UN42 357 aaPredicted RBP10.67□□□□□ -0.7
ZNF544-207ENST00000596677 AQRO60306 1485 aaKnown RBP eCLIP10.67□□□□□ -0.76e-7■■■■■ 28.4
ZNF544-207ENST00000596677 EEA1Q15075 1411 aa10.67□□□□□ -0.7
ZNF544-207ENST00000596677 CEP162Q5TB80 1403 aa10.66□□□□□ -0.7
ZNF544-207ENST00000596677 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
ZNF544-207ENST00000596677 GAPVD1Q14C86 1478 aa10.64□□□□□ -0.71
ZNF544-207ENST00000596677 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
ZNF544-207ENST00000596677 APLP2Q06481 763 aa10.64□□□□□ -0.71
ZNF544-207ENST00000596677 TOP2BQ02880 1626 aa10.63□□□□□ -0.71
ZNF544-207ENST00000596677 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
ZNF544-207ENST00000596677 WDR62O43379 1518 aa10.62□□□□□ -0.71
ZNF544-207ENST00000596677 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
ZNF544-207ENST00000596677 GRIN2BQ13224 1484 aa10.6□□□□□ -0.71
ZNF544-207ENST00000596677 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
ZNF544-207ENST00000596677 P3H3Q8IVL6 736 aa10.58□□□□□ -0.72
ZNF544-207ENST00000596677 PRDM2Q13029 1718 aa10.58□□□□□ -0.72
ZNF544-207ENST00000596677 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
ZNF544-207ENST00000596677 ZNF608Q9ULD9 1512 aaPredicted RBP10.57□□□□□ -0.72
ZNF544-207ENST00000596677 IGF1RP08069 1367 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms