RNA–Protein interactions for RNA: ENST00000591611.5

TUBD1-212, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-212ENST00000591611 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
TUBD1-212ENST00000591611 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
TUBD1-212ENST00000591611 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
TUBD1-212ENST00000591611 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
TUBD1-212ENST00000591611 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
TUBD1-212ENST00000591611 FOXD1Q16676 465 aa19.6■□□□□ 0.73
TUBD1-212ENST00000591611 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
TUBD1-212ENST00000591611 MSH5O43196 834 aa18.54■□□□□ 0.56
TUBD1-212ENST00000591611 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.55
TUBD1-212ENST00000591611 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
TUBD1-212ENST00000591611 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
TUBD1-212ENST00000591611 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
TUBD1-212ENST00000591611 ADRA2BP18089 450 aa18.1■□□□□ 0.49
TUBD1-212ENST00000591611 ABCC9O60706 1549 aa17.93■□□□□ 0.46
TUBD1-212ENST00000591611 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
TUBD1-212ENST00000591611 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
TUBD1-212ENST00000591611 NACADO15069 1562 aa17.36■□□□□ 0.37
TUBD1-212ENST00000591611 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
TUBD1-212ENST00000591611 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.37
TUBD1-212ENST00000591611 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
TUBD1-212ENST00000591611 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
TUBD1-212ENST00000591611 SCRIBQ14160 1630 aa16.94■□□□□ 0.3
TUBD1-212ENST00000591611 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
TUBD1-212ENST00000591611 PABPN1Q86U42 306 aaKnown RBP eCLIP16.81■□□□□ 0.28
TUBD1-212ENST00000591611 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
TUBD1-212ENST00000591611 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
TUBD1-212ENST00000591611 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
TUBD1-212ENST00000591611 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
TUBD1-212ENST00000591611 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
TUBD1-212ENST00000591611 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.2
TUBD1-212ENST00000591611 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
TUBD1-212ENST00000591611 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
TUBD1-212ENST00000591611 CC2D2AQ9P2K1 1620 aa16.23■□□□□ 0.19
TUBD1-212ENST00000591611 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
TUBD1-212ENST00000591611 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
TUBD1-212ENST00000591611 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
TUBD1-212ENST00000591611 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
TUBD1-212ENST00000591611 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
TUBD1-212ENST00000591611 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
TUBD1-212ENST00000591611 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
TUBD1-212ENST00000591611 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
TUBD1-212ENST00000591611 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
TUBD1-212ENST00000591611 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
TUBD1-212ENST00000591611 WIZO95785 1651 aa16■□□□□ 0.15
TUBD1-212ENST00000591611 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
TUBD1-212ENST00000591611 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
TUBD1-212ENST00000591611 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
TUBD1-212ENST00000591611 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
TUBD1-212ENST00000591611 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
TUBD1-212ENST00000591611 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
TUBD1-212ENST00000591611 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
TUBD1-212ENST00000591611 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
TUBD1-212ENST00000591611 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
TUBD1-212ENST00000591611 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
TUBD1-212ENST00000591611 NESP48681 1621 aa15.6■□□□□ 0.09
TUBD1-212ENST00000591611 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
TUBD1-212ENST00000591611 CADPSQ9ULU8 1353 aa15.58■□□□□ 0.08
TUBD1-212ENST00000591611 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
TUBD1-212ENST00000591611 CFTRP13569 1480 aa15.53■□□□□ 0.08
TUBD1-212ENST00000591611 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
TUBD1-212ENST00000591611 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
TUBD1-212ENST00000591611 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
TUBD1-212ENST00000591611 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
TUBD1-212ENST00000591611 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
TUBD1-212ENST00000591611 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
TUBD1-212ENST00000591611 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
TUBD1-212ENST00000591611 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
TUBD1-212ENST00000591611 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
TUBD1-212ENST00000591611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
TUBD1-212ENST00000591611 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
TUBD1-212ENST00000591611 WDR62O43379 1518 aa15.22■□□□□ 0.03
TUBD1-212ENST00000591611 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
TUBD1-212ENST00000591611 CUX2O14529 1486 aa15.18■□□□□ 0.02
TUBD1-212ENST00000591611 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
TUBD1-212ENST00000591611 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
TUBD1-212ENST00000591611 CUX1P39880 1505 aa15.16■□□□□ 0.02
TUBD1-212ENST00000591611 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
TUBD1-212ENST00000591611 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
TUBD1-212ENST00000591611 TOP2BQ02880 1626 aa15.07■□□□□ 0
TUBD1-212ENST00000591611 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
TUBD1-212ENST00000591611 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
TUBD1-212ENST00000591611 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
TUBD1-212ENST00000591611 IFT140Q96RY7 1462 aa15.02■□□□□ -0
TUBD1-212ENST00000591611 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
TUBD1-212ENST00000591611 SOGA1O94964 1423 aa15□□□□□ -0.01
TUBD1-212ENST00000591611 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
TUBD1-212ENST00000591611 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
TUBD1-212ENST00000591611 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
TUBD1-212ENST00000591611 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
TUBD1-212ENST00000591611 WDR97A6NE52 1622 aa14.92□□□□□ -0.02
TUBD1-212ENST00000591611 KCNA4P22459 653 aa14.92□□□□□ -0.02
TUBD1-212ENST00000591611 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
TUBD1-212ENST00000591611 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
TUBD1-212ENST00000591611 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
TUBD1-212ENST00000591611 EIF4G3O43432 1585 aaKnown RBP14.89□□□□□ -0.03
TUBD1-212ENST00000591611 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
TUBD1-212ENST00000591611 GAPVD1Q14C86 1478 aa14.83□□□□□ -0.03
TUBD1-212ENST00000591611 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
TUBD1-212ENST00000591611 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
TUBD1-212ENST00000591611 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms