RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
GFAP-216ENST00000589701 CCDC180Q9P1Z9 1646 aa20.1■□□□□ 0.81
GFAP-216ENST00000589701 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
GFAP-216ENST00000589701 ABCC9O60706 1549 aa19.92■□□□□ 0.78
GFAP-216ENST00000589701 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
GFAP-216ENST00000589701 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
GFAP-216ENST00000589701 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
GFAP-216ENST00000589701 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.64
GFAP-216ENST00000589701 NACADO15069 1562 aa18.97■□□□□ 0.63
GFAP-216ENST00000589701 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
GFAP-216ENST00000589701 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
GFAP-216ENST00000589701 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
GFAP-216ENST00000589701 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
GFAP-216ENST00000589701 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
GFAP-216ENST00000589701 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
GFAP-216ENST00000589701 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
GFAP-216ENST00000589701 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
GFAP-216ENST00000589701 LOC105371045A0A1W2PR82 267 aa18.25■□□□□ 0.51
GFAP-216ENST00000589701 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
GFAP-216ENST00000589701 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
GFAP-216ENST00000589701 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
GFAP-216ENST00000589701 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.49
GFAP-216ENST00000589701 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
GFAP-216ENST00000589701 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
GFAP-216ENST00000589701 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.48
GFAP-216ENST00000589701 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
GFAP-216ENST00000589701 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
GFAP-216ENST00000589701 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
GFAP-216ENST00000589701 WIZO95785 1651 aa17.91■□□□□ 0.46
GFAP-216ENST00000589701 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
GFAP-216ENST00000589701 MYT1Q01538 1121 aa17.68■□□□□ 0.42
GFAP-216ENST00000589701 HRCP23327 699 aa17.65■□□□□ 0.42
GFAP-216ENST00000589701 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
GFAP-216ENST00000589701 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
GFAP-216ENST00000589701 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
GFAP-216ENST00000589701 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
GFAP-216ENST00000589701 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
GFAP-216ENST00000589701 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
GFAP-216ENST00000589701 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
GFAP-216ENST00000589701 ATAD2BQ9ULI0 1458 aa17.42■□□□□ 0.38
GFAP-216ENST00000589701 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
GFAP-216ENST00000589701 TTBK1Q5TCY1 1321 aaPredicted RBP17.4■□□□□ 0.38
GFAP-216ENST00000589701 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
GFAP-216ENST00000589701 SOGA1O94964 1423 aa17.32■□□□□ 0.36
GFAP-216ENST00000589701 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
GFAP-216ENST00000589701 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
GFAP-216ENST00000589701 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.35
GFAP-216ENST00000589701 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
GFAP-216ENST00000589701 CUX2O14529 1486 aa17.23■□□□□ 0.35
GFAP-216ENST00000589701 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
GFAP-216ENST00000589701 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
GFAP-216ENST00000589701 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
GFAP-216ENST00000589701 NESP48681 1621 aa17.12■□□□□ 0.33
GFAP-216ENST00000589701 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
GFAP-216ENST00000589701 LAMC3Q9Y6N6 1575 aa17.1■□□□□ 0.33
GFAP-216ENST00000589701 PRKCSHP14314 528 aaPredicted RBP17.09■□□□□ 0.33
GFAP-216ENST00000589701 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
GFAP-216ENST00000589701 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
GFAP-216ENST00000589701 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
GFAP-216ENST00000589701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
GFAP-216ENST00000589701 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
GFAP-216ENST00000589701 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
GFAP-216ENST00000589701 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
GFAP-216ENST00000589701 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
GFAP-216ENST00000589701 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
GFAP-216ENST00000589701 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
GFAP-216ENST00000589701 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
GFAP-216ENST00000589701 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
GFAP-216ENST00000589701 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
GFAP-216ENST00000589701 EEA1Q15075 1411 aa16.85■□□□□ 0.29
GFAP-216ENST00000589701 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
GFAP-216ENST00000589701 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
GFAP-216ENST00000589701 WDR62O43379 1518 aa16.79■□□□□ 0.28
GFAP-216ENST00000589701 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
GFAP-216ENST00000589701 CFTRP13569 1480 aa16.77■□□□□ 0.27
GFAP-216ENST00000589701 CLIP1P30622 1438 aa16.77■□□□□ 0.27
GFAP-216ENST00000589701 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
GFAP-216ENST00000589701 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
GFAP-216ENST00000589701 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
GFAP-216ENST00000589701 CUX1P39880 1505 aa16.73■□□□□ 0.27
GFAP-216ENST00000589701 KIF21BO75037 1637 aa16.69■□□□□ 0.26
GFAP-216ENST00000589701 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
GFAP-216ENST00000589701 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
GFAP-216ENST00000589701 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
GFAP-216ENST00000589701 APLP2Q06481 763 aa16.64■□□□□ 0.25
GFAP-216ENST00000589701 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
GFAP-216ENST00000589701 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
GFAP-216ENST00000589701 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.24
GFAP-216ENST00000589701 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
GFAP-216ENST00000589701 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
GFAP-216ENST00000589701 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
GFAP-216ENST00000589701 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
GFAP-216ENST00000589701 ITGAEP38570 1179 aa16.48■□□□□ 0.23
GFAP-216ENST00000589701 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
GFAP-216ENST00000589701 IGF1RP08069 1367 aa16.46■□□□□ 0.23
GFAP-216ENST00000589701 IFT140Q96RY7 1462 aa16.46■□□□□ 0.22
GFAP-216ENST00000589701 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
GFAP-216ENST00000589701 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
GFAP-216ENST00000589701 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
GFAP-216ENST00000589701 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms