RNA–Protein interactions for RNA: ENST00000589215.5

C18orf8-204, Transcript of Uncharacterized protein C18orf8, humanhuman

TSL 2

Gene C18orf8, Length 1,945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf8-204ENST00000589215 NISCHQ9Y2I1 1504 aa45.56■■■■■ 4.88
C18orf8-204ENST00000589215 CCDC180Q9P1Z9 1646 aa39.19■■■■□ 3.86
C18orf8-204ENST00000589215 ZCCHC6Q5VYS8 1495 aaKnown RBP38.57■■■■□ 3.77
C18orf8-204ENST00000589215 SHROOM4Q9ULL8 1493 aa38.02■■■■□ 3.68
C18orf8-204ENST00000589215 DCAF1Q9Y4B6 1507 aa37.75■■■■□ 3.63
C18orf8-204ENST00000589215 SUPT5HO00267 1087 aaKnown RBP37.26■■■■□ 3.56
C18orf8-204ENST00000589215 ABCC9O60706 1549 aa37.16■■■■□ 3.54
C18orf8-204ENST00000589215 DCAF8L2P0C7V8 631 aa37.06■■■■□ 3.52
C18orf8-204ENST00000589215 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
C18orf8-204ENST00000589215 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
C18orf8-204ENST00000589215 NACADO15069 1562 aa36.15■■■■□ 3.38
C18orf8-204ENST00000589215 SCRIBQ14160 1630 aa36.14■■■■□ 3.38
C18orf8-204ENST00000589215 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
C18orf8-204ENST00000589215 RB1CC1Q8TDY2 1594 aa35.83■■■■□ 3.33
C18orf8-204ENST00000589215 MROH2BQ7Z745 1585 aa35.21■■■■□ 3.23
C18orf8-204ENST00000589215 CECR2Q9BXF3 1484 aa35.21■■■■□ 3.23
C18orf8-204ENST00000589215 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
C18orf8-204ENST00000589215 BAZ1AQ9NRL2 1556 aaPredicted RBP35.12■■■■□ 3.21
C18orf8-204ENST00000589215 HRCP23327 699 aa35.1■■■■□ 3.21
C18orf8-204ENST00000589215 WIZO95785 1651 aa35.02■■■■□ 3.2
C18orf8-204ENST00000589215 TRIM41Q8WV44 630 aa35■■■■□ 3.19
C18orf8-204ENST00000589215 LOC105371045A0A1W2PR82 267 aa34.99■■■■□ 3.19
C18orf8-204ENST00000589215 PCGF6Q9BYE7 350 aa34.91■■■■□ 3.18
C18orf8-204ENST00000589215 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
C18orf8-204ENST00000589215 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
C18orf8-204ENST00000589215 SMARCA4P51532 1647 aa34.77■■■■□ 3.16
C18orf8-204ENST00000589215 TOP2AP11388 1531 aaKnown RBP34.75■■■■□ 3.15
C18orf8-204ENST00000589215 EIF4G1Q04637 1599 aaKnown RBP34.73■■■■□ 3.15
C18orf8-204ENST00000589215 TRIM26Q12899 539 aaPredicted RBP34.66■■■■□ 3.14
C18orf8-204ENST00000589215 SMARCA2P51531 1590 aa34.43■■■■□ 3.1
C18orf8-204ENST00000589215 CCDC88BA6NC98 1476 aa34.35■■■■□ 3.09
C18orf8-204ENST00000589215 FAM9AQ8IZU1 332 aaPredicted RBP34.31■■■■□ 3.08
C18orf8-204ENST00000589215 PEG3Q9GZU2 1588 aa34.3■■■■□ 3.08
C18orf8-204ENST00000589215 ZEB1P37275 1124 aaPredicted RBP34.11■■■■□ 3.05
C18orf8-204ENST00000589215 EEA1Q15075 1411 aa34.07■■■■□ 3.04
C18orf8-204ENST00000589215 ABCC8Q09428 1581 aa34.05■■■■□ 3.04
C18orf8-204ENST00000589215 PPARGC1BQ86YN6 1023 aaKnown RBP33.89■■■■□ 3.02
C18orf8-204ENST00000589215 ATAD2BQ9ULI0 1458 aa33.81■■■■□ 3
C18orf8-204ENST00000589215 WRNQ14191 1432 aaPredicted RBP eCLIP33.8■■■■□ 3
C18orf8-204ENST00000589215 TNIKQ9UKE5 1360 aa33.74■■■□□ 2.99
C18orf8-204ENST00000589215 BAZ1BQ9UIG0 1483 aaKnown RBP33.73■■■□□ 2.99
C18orf8-204ENST00000589215 EHMT2Q96KQ7 1210 aa33.71■■■□□ 2.99
C18orf8-204ENST00000589215 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
C18orf8-204ENST00000589215 SOGA1O94964 1423 aa33.67■■■□□ 2.98
C18orf8-204ENST00000589215 CEP162Q5TB80 1403 aa33.64■■■□□ 2.98
C18orf8-204ENST00000589215 GOLGA3Q08378 1498 aa33.61■■■□□ 2.97
C18orf8-204ENST00000589215 CSRNP3Q8WYN3 585 aa33.61■■■□□ 2.97
C18orf8-204ENST00000589215 CC2D2AQ9P2K1 1620 aa33.6■■■□□ 2.97
C18orf8-204ENST00000589215 KIF21BO75037 1637 aa33.52■■■□□ 2.96
C18orf8-204ENST00000589215 SYNJ1O43426 1573 aa33.52■■■□□ 2.96
C18orf8-204ENST00000589215 CEP164Q9UPV0 1460 aa33.47■■■□□ 2.95
C18orf8-204ENST00000589215 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
C18orf8-204ENST00000589215 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
C18orf8-204ENST00000589215 TOP2BQ02880 1626 aa33.33■■■□□ 2.93
C18orf8-204ENST00000589215 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
C18orf8-204ENST00000589215 BIVM-ERCC5R4GMW8 1640 aa33.3■■■□□ 2.92
C18orf8-204ENST00000589215 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
C18orf8-204ENST00000589215 CLIP1P30622 1438 aa33.07■■■□□ 2.88
C18orf8-204ENST00000589215 ERICH3Q5RHP9 1530 aa33.05■■■□□ 2.88
C18orf8-204ENST00000589215 CCER1Q8TC90 406 aaPredicted RBP33.04■■■□□ 2.88
C18orf8-204ENST00000589215 VPS8Q8N3P4 1428 aa33.01■■■□□ 2.87
C18orf8-204ENST00000589215 PRDM2Q13029 1718 aa33■■■□□ 2.87
C18orf8-204ENST00000589215 RAPGEF2Q9Y4G8 1499 aa32.96■■■□□ 2.87
C18orf8-204ENST00000589215 CFTRP13569 1480 aa32.94■■■□□ 2.86
C18orf8-204ENST00000589215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.92■■■□□ 2.86
C18orf8-204ENST00000589215 PRXQ9BXM0 1461 aa32.87■■■□□ 2.85
C18orf8-204ENST00000589215 CUX1P39880 1505 aa32.85■■■□□ 2.85
C18orf8-204ENST00000589215 KIF27Q86VH2 1401 aa32.78■■■□□ 2.84
C18orf8-204ENST00000589215 APLP2Q06481 763 aa32.74■■■□□ 2.83
C18orf8-204ENST00000589215 TTBK1Q5TCY1 1321 aaPredicted RBP32.7■■■□□ 2.82
C18orf8-204ENST00000589215 ARAP1Q96P48 1450 aa32.55■■■□□ 2.8
C18orf8-204ENST00000589215 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
C18orf8-204ENST00000589215 NESP48681 1621 aa32.36■■■□□ 2.77
C18orf8-204ENST00000589215 CUX2O14529 1486 aa32.35■■■□□ 2.77
C18orf8-204ENST00000589215 DIEXFQ68CQ4 756 aaKnown RBP32.33■■■□□ 2.77
C18orf8-204ENST00000589215 HNRNPUL2Q1KMD3 747 aaKnown RBP32.31■■■□□ 2.76
C18orf8-204ENST00000589215 FGD5Q6ZNL6 1462 aa32.3■■■□□ 2.76
C18orf8-204ENST00000589215 ARHGAP35Q9NRY4 1499 aa32.3■■■□□ 2.76
C18orf8-204ENST00000589215 CLSPNQ9HAW4 1339 aa32.29■■■□□ 2.76
C18orf8-204ENST00000589215 IGF1RP08069 1367 aa32.26■■■□□ 2.76
C18orf8-204ENST00000589215 MAP3K1Q13233 1512 aa32.26■■■□□ 2.75
C18orf8-204ENST00000589215 RRBP1Q9P2E9 1410 aaKnown RBP32.25■■■□□ 2.75
C18orf8-204ENST00000589215 ZNF316A6NFI3 1004 aaPredicted RBP32.24■■■□□ 2.75
C18orf8-204ENST00000589215 RANGAP1P46060 587 aaPredicted RBP32.24■■■□□ 2.75
C18orf8-204ENST00000589215 DNMBPQ6XZF7 1577 aa32.21■■■□□ 2.75
C18orf8-204ENST00000589215 FANCD2Q9BXW9 1451 aa32.2■■■□□ 2.75
C18orf8-204ENST00000589215 LAMC3Q9Y6N6 1575 aa32.18■■■□□ 2.74
C18orf8-204ENST00000589215 CARMIL1Q5VZK9 1371 aa32.17■■■□□ 2.74
C18orf8-204ENST00000589215 ABCA10Q8WWZ4 1543 aa32.08■■■□□ 2.73
C18orf8-204ENST00000589215 TIAM1Q13009 1591 aa32.06■■■□□ 2.72
C18orf8-204ENST00000589215 CUL7Q14999 1698 aa32.06■■■□□ 2.72
C18orf8-204ENST00000589215 CENPBP07199 599 aaPredicted RBP32.05■■■□□ 2.72
C18orf8-204ENST00000589215 KANK4Q5T7N3 995 aaPredicted RBP32.04■■■□□ 2.72
C18orf8-204ENST00000589215 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
C18orf8-204ENST00000589215 CCNB3Q8WWL7 1395 aa32.01■■■□□ 2.71
C18orf8-204ENST00000589215 TOPBP1Q92547 1522 aa32■■■□□ 2.71
C18orf8-204ENST00000589215 SCAF1Q9H7N4 1312 aaKnown RBP31.99■■■□□ 2.71
C18orf8-204ENST00000589215 ACIN1Q9UKV3 1341 aaKnown RBP31.99■■■□□ 2.71
C18orf8-204ENST00000589215 EFCAB5A4FU69 1503 aa31.98■■■□□ 2.71
C18orf8-204ENST00000589215 DHX57Q6P158 1386 aaKnown RBP31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms