RNA–Protein interactions for RNA: ENST00000586173.1

POP4-204, Transcript of POP4 homolog, ribonuclease P/MRP subunit, humanhuman

TSL 3

Gene POP4, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POP4-204ENST00000586173 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
POP4-204ENST00000586173 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
POP4-204ENST00000586173 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
POP4-204ENST00000586173 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
POP4-204ENST00000586173 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
POP4-204ENST00000586173 ABCC9O60706 1549 aa16.41■□□□□ 0.22
POP4-204ENST00000586173 FOXD1Q16676 465 aa16.33■□□□□ 0.2
POP4-204ENST00000586173 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
POP4-204ENST00000586173 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
POP4-204ENST00000586173 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
POP4-204ENST00000586173 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
POP4-204ENST00000586173 ADRA2BP18089 450 aa15.55■□□□□ 0.08
POP4-204ENST00000586173 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
POP4-204ENST00000586173 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
POP4-204ENST00000586173 RB1CC1Q8TDY2 1594 aa15.2■□□□□ 0.02
POP4-204ENST00000586173 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
POP4-204ENST00000586173 DCAF8L2P0C7V8 631 aa15.03■□□□□ -0
POP4-204ENST00000586173 MSH5O43196 834 aa15□□□□□ -0.01
POP4-204ENST00000586173 NACADO15069 1562 aa14.93□□□□□ -0.02
POP4-204ENST00000586173 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.03
POP4-204ENST00000586173 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
POP4-204ENST00000586173 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
POP4-204ENST00000586173 CC2D2AQ9P2K1 1620 aa14.71□□□□□ -0.05
POP4-204ENST00000586173 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
POP4-204ENST00000586173 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
POP4-204ENST00000586173 SHROOM4Q9ULL8 1493 aa14.4□□□□□ -0.1
POP4-204ENST00000586173 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
POP4-204ENST00000586173 CUX2O14529 1486 aa14.3□□□□□ -0.12
POP4-204ENST00000586173 SCRIBQ14160 1630 aa14.27□□□□□ -0.12
POP4-204ENST00000586173 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
POP4-204ENST00000586173 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
POP4-204ENST00000586173 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
POP4-204ENST00000586173 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
POP4-204ENST00000586173 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
POP4-204ENST00000586173 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
POP4-204ENST00000586173 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
POP4-204ENST00000586173 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
POP4-204ENST00000586173 NESP48681 1621 aa13.9□□□□□ -0.18
POP4-204ENST00000586173 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
POP4-204ENST00000586173 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
POP4-204ENST00000586173 KCNA4P22459 653 aa13.8□□□□□ -0.2
POP4-204ENST00000586173 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
POP4-204ENST00000586173 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
POP4-204ENST00000586173 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
POP4-204ENST00000586173 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
POP4-204ENST00000586173 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
POP4-204ENST00000586173 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
POP4-204ENST00000586173 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
POP4-204ENST00000586173 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
POP4-204ENST00000586173 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
POP4-204ENST00000586173 PDS5BQ9NTI5 1447 aa13.6□□□□□ -0.23
POP4-204ENST00000586173 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
POP4-204ENST00000586173 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.24
POP4-204ENST00000586173 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
POP4-204ENST00000586173 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
POP4-204ENST00000586173 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
POP4-204ENST00000586173 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
POP4-204ENST00000586173 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
POP4-204ENST00000586173 RIMBP3CA6NJZ7 1639 aa13.48□□□□□ -0.25
POP4-204ENST00000586173 RIMBP3BA6NNM3 1639 aa13.48□□□□□ -0.25
POP4-204ENST00000586173 RIMBP3Q9UFD9 1639 aa13.48□□□□□ -0.25
POP4-204ENST00000586173 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
POP4-204ENST00000586173 WDR62O43379 1518 aa13.44□□□□□ -0.26
POP4-204ENST00000586173 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
POP4-204ENST00000586173 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
POP4-204ENST00000586173 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
POP4-204ENST00000586173 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
POP4-204ENST00000586173 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
POP4-204ENST00000586173 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
POP4-204ENST00000586173 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
POP4-204ENST00000586173 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
POP4-204ENST00000586173 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
POP4-204ENST00000586173 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
POP4-204ENST00000586173 FBLN2P98095 1184 aa13.15□□□□□ -0.3
POP4-204ENST00000586173 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
POP4-204ENST00000586173 CFTRP13569 1480 aa13.09□□□□□ -0.31
POP4-204ENST00000586173 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
POP4-204ENST00000586173 WIZO95785 1651 aa13.05□□□□□ -0.32
POP4-204ENST00000586173 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
POP4-204ENST00000586173 CHD1O14646 1710 aa13.02□□□□□ -0.33
POP4-204ENST00000586173 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
POP4-204ENST00000586173 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
POP4-204ENST00000586173 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.33
POP4-204ENST00000586173 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
POP4-204ENST00000586173 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
POP4-204ENST00000586173 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
POP4-204ENST00000586173 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
POP4-204ENST00000586173 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
POP4-204ENST00000586173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
POP4-204ENST00000586173 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.35
POP4-204ENST00000586173 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
POP4-204ENST00000586173 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
POP4-204ENST00000586173 TARBP1Q13395 1621 aaKnown RBP12.81□□□□□ -0.36
POP4-204ENST00000586173 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
POP4-204ENST00000586173 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
POP4-204ENST00000586173 ZBTB22O15209 634 aa12.79□□□□□ -0.36
POP4-204ENST00000586173 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
POP4-204ENST00000586173 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
POP4-204ENST00000586173 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
POP4-204ENST00000586173 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms