RNA–Protein interactions for RNA: ENST00000583481.5

CCDC144NL-AS1-217, CCDC144NL antisense RNA 1, humanhuman

TSL 3

Gene CCDC144NL-AS1, Length 710 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-217ENST00000583481 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.13
CCDC144NL-AS1-217ENST00000583481 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
CCDC144NL-AS1-217ENST00000583481 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
CCDC144NL-AS1-217ENST00000583481 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
CCDC144NL-AS1-217ENST00000583481 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
CCDC144NL-AS1-217ENST00000583481 CCDC180Q9P1Z9 1646 aa17.6■□□□□ 0.41
CCDC144NL-AS1-217ENST00000583481 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
CCDC144NL-AS1-217ENST00000583481 FOXD1Q16676 465 aa17.42■□□□□ 0.38
CCDC144NL-AS1-217ENST00000583481 ABCC9O60706 1549 aa17.06■□□□□ 0.32
CCDC144NL-AS1-217ENST00000583481 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
CCDC144NL-AS1-217ENST00000583481 ADRA2BP18089 450 aa16.7■□□□□ 0.26
CCDC144NL-AS1-217ENST00000583481 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
CCDC144NL-AS1-217ENST00000583481 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
CCDC144NL-AS1-217ENST00000583481 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
CCDC144NL-AS1-217ENST00000583481 PIAS4Q8N2W9 510 aaPredicted RBP16.42■□□□□ 0.22
CCDC144NL-AS1-217ENST00000583481 NACADO15069 1562 aa16.42■□□□□ 0.22
CCDC144NL-AS1-217ENST00000583481 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
CCDC144NL-AS1-217ENST00000583481 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
CCDC144NL-AS1-217ENST00000583481 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
CCDC144NL-AS1-217ENST00000583481 MSH5O43196 834 aa16.16■□□□□ 0.18
CCDC144NL-AS1-217ENST00000583481 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
CCDC144NL-AS1-217ENST00000583481 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
CCDC144NL-AS1-217ENST00000583481 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
CCDC144NL-AS1-217ENST00000583481 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
CCDC144NL-AS1-217ENST00000583481 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
CCDC144NL-AS1-217ENST00000583481 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
CCDC144NL-AS1-217ENST00000583481 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
CCDC144NL-AS1-217ENST00000583481 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CCDC144NL-AS1-217ENST00000583481 SCAF1Q9H7N4 1312 aaKnown RBP15.44■□□□□ 0.06
CCDC144NL-AS1-217ENST00000583481 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
CCDC144NL-AS1-217ENST00000583481 CECR2Q9BXF3 1484 aa15.41■□□□□ 0.06
CCDC144NL-AS1-217ENST00000583481 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
CCDC144NL-AS1-217ENST00000583481 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
CCDC144NL-AS1-217ENST00000583481 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
CCDC144NL-AS1-217ENST00000583481 WIZO95785 1651 aa15.22■□□□□ 0.03
CCDC144NL-AS1-217ENST00000583481 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
CCDC144NL-AS1-217ENST00000583481 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
CCDC144NL-AS1-217ENST00000583481 MAPK8IP2Q13387 824 aaPredicted RBP15.14■□□□□ 0.01
CCDC144NL-AS1-217ENST00000583481 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
CCDC144NL-AS1-217ENST00000583481 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
CCDC144NL-AS1-217ENST00000583481 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
CCDC144NL-AS1-217ENST00000583481 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
CCDC144NL-AS1-217ENST00000583481 NCAPD3P42695 1498 aa15.08■□□□□ 0
CCDC144NL-AS1-217ENST00000583481 BAZ1BQ9UIG0 1483 aaKnown RBP15.08■□□□□ 0
CCDC144NL-AS1-217ENST00000583481 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
CCDC144NL-AS1-217ENST00000583481 KCNA4P22459 653 aa15.03■□□□□ -0
CCDC144NL-AS1-217ENST00000583481 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
CCDC144NL-AS1-217ENST00000583481 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
CCDC144NL-AS1-217ENST00000583481 NESP48681 1621 aa14.82□□□□□ -0.04
CCDC144NL-AS1-217ENST00000583481 PRDM2Q13029 1718 aa14.81□□□□□ -0.04
CCDC144NL-AS1-217ENST00000583481 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
CCDC144NL-AS1-217ENST00000583481 KIF21AQ7Z4S6 1674 aa14.79□□□□□ -0.04
CCDC144NL-AS1-217ENST00000583481 RNF216Q9NWF9 866 aaPredicted RBP14.79□□□□□ -0.04
CCDC144NL-AS1-217ENST00000583481 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
CCDC144NL-AS1-217ENST00000583481 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
CCDC144NL-AS1-217ENST00000583481 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
CCDC144NL-AS1-217ENST00000583481 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
CCDC144NL-AS1-217ENST00000583481 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
CCDC144NL-AS1-217ENST00000583481 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
CCDC144NL-AS1-217ENST00000583481 CFTRP13569 1480 aa14.62□□□□□ -0.07
CCDC144NL-AS1-217ENST00000583481 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
CCDC144NL-AS1-217ENST00000583481 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
CCDC144NL-AS1-217ENST00000583481 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
CCDC144NL-AS1-217ENST00000583481 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
CCDC144NL-AS1-217ENST00000583481 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
CCDC144NL-AS1-217ENST00000583481 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
CCDC144NL-AS1-217ENST00000583481 WDR62O43379 1518 aa14.44□□□□□ -0.1
CCDC144NL-AS1-217ENST00000583481 URB2Q14146 1524 aaKnown RBP14.43□□□□□ -0.1
CCDC144NL-AS1-217ENST00000583481 CUX2O14529 1486 aa14.39□□□□□ -0.11
CCDC144NL-AS1-217ENST00000583481 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
CCDC144NL-AS1-217ENST00000583481 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
CCDC144NL-AS1-217ENST00000583481 DNMBPQ6XZF7 1577 aa14.37□□□□□ -0.11
CCDC144NL-AS1-217ENST00000583481 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
CCDC144NL-AS1-217ENST00000583481 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
CCDC144NL-AS1-217ENST00000583481 CUX1P39880 1505 aa14.33□□□□□ -0.12
CCDC144NL-AS1-217ENST00000583481 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
CCDC144NL-AS1-217ENST00000583481 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
CCDC144NL-AS1-217ENST00000583481 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
CCDC144NL-AS1-217ENST00000583481 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
CCDC144NL-AS1-217ENST00000583481 EEA1Q15075 1411 aa14.24□□□□□ -0.13
CCDC144NL-AS1-217ENST00000583481 WDR97A6NE52 1622 aa14.24□□□□□ -0.13
CCDC144NL-AS1-217ENST00000583481 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
CCDC144NL-AS1-217ENST00000583481 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
CCDC144NL-AS1-217ENST00000583481 POLA1P09884 1462 aaPredicted RBP14.23□□□□□ -0.13
CCDC144NL-AS1-217ENST00000583481 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
CCDC144NL-AS1-217ENST00000583481 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
CCDC144NL-AS1-217ENST00000583481 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
CCDC144NL-AS1-217ENST00000583481 EIF4G3O43432 1585 aaKnown RBP14.19□□□□□ -0.14
CCDC144NL-AS1-217ENST00000583481 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
CCDC144NL-AS1-217ENST00000583481 PBRM1Q86U86 1689 aa14.17□□□□□ -0.14
CCDC144NL-AS1-217ENST00000583481 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
CCDC144NL-AS1-217ENST00000583481 SOGA1O94964 1423 aa14.15□□□□□ -0.14
CCDC144NL-AS1-217ENST00000583481 CHD1O14646 1710 aa14.1□□□□□ -0.15
CCDC144NL-AS1-217ENST00000583481 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCDC144NL-AS1-217ENST00000583481 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.15
CCDC144NL-AS1-217ENST00000583481 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
CCDC144NL-AS1-217ENST00000583481 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
CCDC144NL-AS1-217ENST00000583481 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
CCDC144NL-AS1-217ENST00000583481 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
CCDC144NL-AS1-217ENST00000583481 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms