RNA–Protein interactions for RNA: ENST00000582894.5

RBFOX3-210, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 3

Gene RBFOX3, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-210ENST00000582894 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
RBFOX3-210ENST00000582894 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
RBFOX3-210ENST00000582894 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
RBFOX3-210ENST00000582894 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
RBFOX3-210ENST00000582894 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
RBFOX3-210ENST00000582894 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
RBFOX3-210ENST00000582894 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
RBFOX3-210ENST00000582894 FOXD1Q16676 465 aa22.06■■□□□ 1.12
RBFOX3-210ENST00000582894 ABCC9O60706 1549 aa21.89■■□□□ 1.09
RBFOX3-210ENST00000582894 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
RBFOX3-210ENST00000582894 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
RBFOX3-210ENST00000582894 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
RBFOX3-210ENST00000582894 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
RBFOX3-210ENST00000582894 NACADO15069 1562 aa21.42■■□□□ 1.02
RBFOX3-210ENST00000582894 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
RBFOX3-210ENST00000582894 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
RBFOX3-210ENST00000582894 ADRA2BP18089 450 aa21.08■□□□□ 0.97
RBFOX3-210ENST00000582894 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
RBFOX3-210ENST00000582894 SCRIBQ14160 1630 aa20.81■□□□□ 0.92
RBFOX3-210ENST00000582894 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
RBFOX3-210ENST00000582894 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
RBFOX3-210ENST00000582894 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
RBFOX3-210ENST00000582894 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
RBFOX3-210ENST00000582894 MSH5O43196 834 aa20.47■□□□□ 0.87
RBFOX3-210ENST00000582894 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
RBFOX3-210ENST00000582894 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
RBFOX3-210ENST00000582894 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
RBFOX3-210ENST00000582894 RSF1Q96T23 1441 aaPredicted RBP20■□□□□ 0.79
RBFOX3-210ENST00000582894 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
RBFOX3-210ENST00000582894 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
RBFOX3-210ENST00000582894 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
RBFOX3-210ENST00000582894 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
RBFOX3-210ENST00000582894 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
RBFOX3-210ENST00000582894 NCAPD3P42695 1498 aa19.81■□□□□ 0.76
RBFOX3-210ENST00000582894 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
RBFOX3-210ENST00000582894 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
RBFOX3-210ENST00000582894 WIZO95785 1651 aa19.74■□□□□ 0.75
RBFOX3-210ENST00000582894 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
RBFOX3-210ENST00000582894 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
RBFOX3-210ENST00000582894 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
RBFOX3-210ENST00000582894 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
RBFOX3-210ENST00000582894 CCDC88BA6NC98 1476 aa19.42■□□□□ 0.7
RBFOX3-210ENST00000582894 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
RBFOX3-210ENST00000582894 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
RBFOX3-210ENST00000582894 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
RBFOX3-210ENST00000582894 CFTRP13569 1480 aa19.22■□□□□ 0.67
RBFOX3-210ENST00000582894 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
RBFOX3-210ENST00000582894 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
RBFOX3-210ENST00000582894 NESP48681 1621 aa19.07■□□□□ 0.64
RBFOX3-210ENST00000582894 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
RBFOX3-210ENST00000582894 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
RBFOX3-210ENST00000582894 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
RBFOX3-210ENST00000582894 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
RBFOX3-210ENST00000582894 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
RBFOX3-210ENST00000582894 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
RBFOX3-210ENST00000582894 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
RBFOX3-210ENST00000582894 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
RBFOX3-210ENST00000582894 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
RBFOX3-210ENST00000582894 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
RBFOX3-210ENST00000582894 KCNA4P22459 653 aa18.79■□□□□ 0.6
RBFOX3-210ENST00000582894 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
RBFOX3-210ENST00000582894 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
RBFOX3-210ENST00000582894 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.59
RBFOX3-210ENST00000582894 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
RBFOX3-210ENST00000582894 URB2Q14146 1524 aaKnown RBP18.73■□□□□ 0.59
RBFOX3-210ENST00000582894 CUX1P39880 1505 aa18.72■□□□□ 0.59
RBFOX3-210ENST00000582894 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
RBFOX3-210ENST00000582894 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
RBFOX3-210ENST00000582894 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
RBFOX3-210ENST00000582894 WDR62O43379 1518 aa18.68■□□□□ 0.58
RBFOX3-210ENST00000582894 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
RBFOX3-210ENST00000582894 THOC2Q8NI27 1593 aaKnown RBP18.65■□□□□ 0.58
RBFOX3-210ENST00000582894 BIVM-ERCC5R4GMW8 1640 aa18.65■□□□□ 0.58
RBFOX3-210ENST00000582894 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
RBFOX3-210ENST00000582894 RNF216Q9NWF9 866 aaPredicted RBP18.59■□□□□ 0.57
RBFOX3-210ENST00000582894 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
RBFOX3-210ENST00000582894 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
RBFOX3-210ENST00000582894 SOGA1O94964 1423 aa18.57■□□□□ 0.56
RBFOX3-210ENST00000582894 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
RBFOX3-210ENST00000582894 CUX2O14529 1486 aa18.52■□□□□ 0.56
RBFOX3-210ENST00000582894 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
RBFOX3-210ENST00000582894 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
RBFOX3-210ENST00000582894 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
RBFOX3-210ENST00000582894 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
RBFOX3-210ENST00000582894 KIF27Q86VH2 1401 aa18.42■□□□□ 0.54
RBFOX3-210ENST00000582894 EEA1Q15075 1411 aa18.41■□□□□ 0.54
RBFOX3-210ENST00000582894 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
RBFOX3-210ENST00000582894 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
RBFOX3-210ENST00000582894 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.53
RBFOX3-210ENST00000582894 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
RBFOX3-210ENST00000582894 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.52
RBFOX3-210ENST00000582894 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
RBFOX3-210ENST00000582894 AQRO60306 1485 aaKnown RBP eCLIP18.32■□□□□ 0.52
RBFOX3-210ENST00000582894 IGF1RP08069 1367 aa18.31■□□□□ 0.52
RBFOX3-210ENST00000582894 ABCA5Q8WWZ7 1642 aa18.29■□□□□ 0.52
RBFOX3-210ENST00000582894 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
RBFOX3-210ENST00000582894 FAM9AQ8IZU1 332 aaPredicted RBP18.27■□□□□ 0.52
RBFOX3-210ENST00000582894 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
RBFOX3-210ENST00000582894 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
RBFOX3-210ENST00000582894 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms