RNA–Protein interactions for RNA: ENST00000581031.5

RHOT1-209, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 3,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-209ENST00000581031 NISCHQ9Y2I1 1504 aa39.69■■■■□ 3.94
RHOT1-209ENST00000581031 SHROOM4Q9ULL8 1493 aa34.47■■■■□ 3.11
RHOT1-209ENST00000581031 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
RHOT1-209ENST00000581031 SUPT5HO00267 1087 aaKnown RBP33.56■■■□□ 2.96
RHOT1-209ENST00000581031 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
RHOT1-209ENST00000581031 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
RHOT1-209ENST00000581031 ABCC9O60706 1549 aa32.57■■■□□ 2.8
RHOT1-209ENST00000581031 DCAF1Q9Y4B6 1507 aa32.07■■■□□ 2.73
RHOT1-209ENST00000581031 SCRIBQ14160 1630 aa32.07■■■□□ 2.72
RHOT1-209ENST00000581031 CHIC1Q5VXU3 224 aa31.89■■■□□ 2.69
RHOT1-209ENST00000581031 MYO15BQ96JP2 1530 aa31.55■■■□□ 2.64
RHOT1-209ENST00000581031 RSF1Q96T23 1441 aaPredicted RBP31.4■■■□□ 2.62
RHOT1-209ENST00000581031 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.62
RHOT1-209ENST00000581031 CECR2Q9BXF3 1484 aa31.39■■■□□ 2.62
RHOT1-209ENST00000581031 EHMT2Q96KQ7 1210 aa31.36■■■□□ 2.61
RHOT1-209ENST00000581031 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
RHOT1-209ENST00000581031 NACADO15069 1562 aa31.34■■■□□ 2.61
RHOT1-209ENST00000581031 FAM9AQ8IZU1 332 aaPredicted RBP31.2■■■□□ 2.59
RHOT1-209ENST00000581031 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
RHOT1-209ENST00000581031 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
RHOT1-209ENST00000581031 TRIM41Q8WV44 630 aa31■■■□□ 2.55
RHOT1-209ENST00000581031 WIZO95785 1651 aa30.82■■■□□ 2.52
RHOT1-209ENST00000581031 PCGF6Q9BYE7 350 aa30.7■■■□□ 2.5
RHOT1-209ENST00000581031 UNC13AQ9UPW8 1703 aa30.52■■■□□ 2.48
RHOT1-209ENST00000581031 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
RHOT1-209ENST00000581031 PPARGC1BQ86YN6 1023 aaKnown RBP30.33■■■□□ 2.45
RHOT1-209ENST00000581031 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
RHOT1-209ENST00000581031 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
RHOT1-209ENST00000581031 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
RHOT1-209ENST00000581031 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
RHOT1-209ENST00000581031 TTBK1Q5TCY1 1321 aaPredicted RBP30.08■■■□□ 2.41
RHOT1-209ENST00000581031 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
RHOT1-209ENST00000581031 SMARCA2P51531 1590 aa29.96■■■□□ 2.39
RHOT1-209ENST00000581031 RANGAP1P46060 587 aaPredicted RBP29.86■■■□□ 2.37
RHOT1-209ENST00000581031 HRCP23327 699 aa29.83■■■□□ 2.37
RHOT1-209ENST00000581031 SOGA1O94964 1423 aa29.82■■■□□ 2.36
RHOT1-209ENST00000581031 ATAD2BQ9ULI0 1458 aa29.82■■■□□ 2.36
RHOT1-209ENST00000581031 TRIM26Q12899 539 aaPredicted RBP29.77■■■□□ 2.36
RHOT1-209ENST00000581031 BAZ1BQ9UIG0 1483 aaKnown RBP29.77■■■□□ 2.36
RHOT1-209ENST00000581031 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
RHOT1-209ENST00000581031 RUSC2Q8N2Y8 1516 aa29.74■■■□□ 2.35
RHOT1-209ENST00000581031 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
RHOT1-209ENST00000581031 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
RHOT1-209ENST00000581031 WRNQ14191 1432 aaPredicted RBP eCLIP29.54■■■□□ 2.32
RHOT1-209ENST00000581031 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
RHOT1-209ENST00000581031 SYNJ1O43426 1573 aa29.32■■■□□ 2.28
RHOT1-209ENST00000581031 CEP162Q5TB80 1403 aa29.25■■■□□ 2.27
RHOT1-209ENST00000581031 DNAJC5BQ9UF47 199 aa29.21■■■□□ 2.27
RHOT1-209ENST00000581031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.19■■■□□ 2.26
RHOT1-209ENST00000581031 NCAPD3P42695 1498 aa29.18■■■□□ 2.26
RHOT1-209ENST00000581031 TNIKQ9UKE5 1360 aa29.06■■■□□ 2.24
RHOT1-209ENST00000581031 RAPGEF2Q9Y4G8 1499 aa29■■■□□ 2.23
RHOT1-209ENST00000581031 GOLGA3Q08378 1498 aa28.98■■■□□ 2.23
RHOT1-209ENST00000581031 EEA1Q15075 1411 aa28.94■■■□□ 2.22
RHOT1-209ENST00000581031 CCER1Q8TC90 406 aaPredicted RBP28.93■■■□□ 2.22
RHOT1-209ENST00000581031 CC2D2AQ9P2K1 1620 aa28.92■■■□□ 2.22
RHOT1-209ENST00000581031 HMGXB3Q12766 1538 aa28.91■■■□□ 2.22
RHOT1-209ENST00000581031 HNRNPUL2Q1KMD3 747 aaKnown RBP28.88■■■□□ 2.21
RHOT1-209ENST00000581031 CUX1P39880 1505 aa28.87■■■□□ 2.21
RHOT1-209ENST00000581031 CFTRP13569 1480 aa28.85■■■□□ 2.21
RHOT1-209ENST00000581031 CLIP1P30622 1438 aa28.85■■■□□ 2.21
RHOT1-209ENST00000581031 CEP164Q9UPV0 1460 aa28.84■■■□□ 2.21
RHOT1-209ENST00000581031 CADPSQ9ULU8 1353 aa28.82■■■□□ 2.2
RHOT1-209ENST00000581031 NESP48681 1621 aa28.81■■■□□ 2.2
RHOT1-209ENST00000581031 APLP2Q06481 763 aa28.8■■■□□ 2.2
RHOT1-209ENST00000581031 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
RHOT1-209ENST00000581031 P3H3Q8IVL6 736 aa28.73■■■□□ 2.19
RHOT1-209ENST00000581031 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
RHOT1-209ENST00000581031 CUX2O14529 1486 aa28.65■■■□□ 2.18
RHOT1-209ENST00000581031 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
RHOT1-209ENST00000581031 ZEB1P37275 1124 aaPredicted RBP28.58■■■□□ 2.17
RHOT1-209ENST00000581031 KANK4Q5T7N3 995 aaPredicted RBP28.56■■■□□ 2.16
RHOT1-209ENST00000581031 FANCD2Q9BXW9 1451 aa28.55■■■□□ 2.16
RHOT1-209ENST00000581031 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
RHOT1-209ENST00000581031 ITGAEP38570 1179 aa28.53■■■□□ 2.16
RHOT1-209ENST00000581031 KIF21BO75037 1637 aa28.53■■■□□ 2.16
RHOT1-209ENST00000581031 FGD5Q6ZNL6 1462 aa28.52■■■□□ 2.16
RHOT1-209ENST00000581031 BIVM-ERCC5R4GMW8 1640 aa28.52■■■□□ 2.16
RHOT1-209ENST00000581031 IGF1RP08069 1367 aa28.5■■■□□ 2.15
RHOT1-209ENST00000581031 PRXQ9BXM0 1461 aa28.48■■■□□ 2.15
RHOT1-209ENST00000581031 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
RHOT1-209ENST00000581031 CARMIL1Q5VZK9 1371 aa28.4■■■□□ 2.14
RHOT1-209ENST00000581031 TDRD9Q8NDG6 1382 aaKnown RBP28.39■■■□□ 2.14
RHOT1-209ENST00000581031 ARAP1Q96P48 1450 aa28.36■■■□□ 2.13
RHOT1-209ENST00000581031 POLA1P09884 1462 aaPredicted RBP28.23■■■□□ 2.11
RHOT1-209ENST00000581031 TOPBP1Q92547 1522 aa28.22■■■□□ 2.11
RHOT1-209ENST00000581031 ARHGAP35Q9NRY4 1499 aa28.19■■■□□ 2.1
RHOT1-209ENST00000581031 ARID3CA6NKF2 412 aa28.19■■■□□ 2.1
RHOT1-209ENST00000581031 ERICH3Q5RHP9 1530 aa28.17■■■□□ 2.1
RHOT1-209ENST00000581031 URB2Q14146 1524 aaKnown RBP28.14■■■□□ 2.1
RHOT1-209ENST00000581031 FAM50AQ14320 339 aaKnown RBP28.05■■■□□ 2.08
RHOT1-209ENST00000581031 FHOD3Q2V2M9 1422 aa28.05■■■□□ 2.08
RHOT1-209ENST00000581031 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
RHOT1-209ENST00000581031 DNMBPQ6XZF7 1577 aa28.02■■■□□ 2.08
RHOT1-209ENST00000581031 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
RHOT1-209ENST00000581031 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.072e-6■■□□□ 13.5
RHOT1-209ENST00000581031 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
RHOT1-209ENST00000581031 FBLN2P98095 1184 aa27.92■■■□□ 2.06
RHOT1-209ENST00000581031 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.06
RHOT1-209ENST00000581031 DIEXFQ68CQ4 756 aaKnown RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms