RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 AEBP2Q6ZN18 517 aaPredicted RBP33.28■■■□□ 2.92
CCDC144CP-203ENST00000580574 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
CCDC144CP-203ENST00000580574 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
CCDC144CP-203ENST00000580574 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
CCDC144CP-203ENST00000580574 PHF23Q9BUL5 403 aaPredicted RBP27.98■■■□□ 2.07
CCDC144CP-203ENST00000580574 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
CCDC144CP-203ENST00000580574 FOXD1Q16676 465 aa26.43■■□□□ 1.82
CCDC144CP-203ENST00000580574 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
CCDC144CP-203ENST00000580574 ABCC9O60706 1549 aa25.43■■□□□ 1.66
CCDC144CP-203ENST00000580574 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
CCDC144CP-203ENST00000580574 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
CCDC144CP-203ENST00000580574 MYO15BQ96JP2 1530 aa25.05■■□□□ 1.6
CCDC144CP-203ENST00000580574 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
CCDC144CP-203ENST00000580574 NACADO15069 1562 aa24.95■■□□□ 1.58
CCDC144CP-203ENST00000580574 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
CCDC144CP-203ENST00000580574 PPP6R1Q9UPN7 881 aa24.77■■□□□ 1.56
CCDC144CP-203ENST00000580574 MSH5O43196 834 aa24.65■■□□□ 1.54
CCDC144CP-203ENST00000580574 ADRA2BP18089 450 aa24.65■■□□□ 1.54
CCDC144CP-203ENST00000580574 PIAS4Q8N2W9 510 aaPredicted RBP24.62■■□□□ 1.53
CCDC144CP-203ENST00000580574 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
CCDC144CP-203ENST00000580574 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
CCDC144CP-203ENST00000580574 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
CCDC144CP-203ENST00000580574 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
CCDC144CP-203ENST00000580574 POTEDQ86YR6 584 aa24.05■■□□□ 1.44
CCDC144CP-203ENST00000580574 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
CCDC144CP-203ENST00000580574 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
CCDC144CP-203ENST00000580574 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
CCDC144CP-203ENST00000580574 SMARCA4P51532 1647 aa23.46■■□□□ 1.35
CCDC144CP-203ENST00000580574 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
CCDC144CP-203ENST00000580574 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
CCDC144CP-203ENST00000580574 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
CCDC144CP-203ENST00000580574 WIZO95785 1651 aa23.27■■□□□ 1.32
CCDC144CP-203ENST00000580574 PEG3Q9GZU2 1588 aa23.25■■□□□ 1.31
CCDC144CP-203ENST00000580574 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
CCDC144CP-203ENST00000580574 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
CCDC144CP-203ENST00000580574 SMARCA2P51531 1590 aa23.11■■□□□ 1.29
CCDC144CP-203ENST00000580574 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
CCDC144CP-203ENST00000580574 NCAPD3P42695 1498 aa23.02■■□□□ 1.28
CCDC144CP-203ENST00000580574 TOP2AP11388 1531 aaKnown RBP23.02■■□□□ 1.28
CCDC144CP-203ENST00000580574 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
CCDC144CP-203ENST00000580574 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
CCDC144CP-203ENST00000580574 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
CCDC144CP-203ENST00000580574 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
CCDC144CP-203ENST00000580574 MAPK8IP2Q13387 824 aaPredicted RBP22.66■■□□□ 1.22
CCDC144CP-203ENST00000580574 SCAF1Q9H7N4 1312 aaKnown RBP22.48■■□□□ 1.19
CCDC144CP-203ENST00000580574 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
CCDC144CP-203ENST00000580574 CFTRP13569 1480 aa22.4■■□□□ 1.18
CCDC144CP-203ENST00000580574 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
CCDC144CP-203ENST00000580574 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
CCDC144CP-203ENST00000580574 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
CCDC144CP-203ENST00000580574 NESP48681 1621 aa22.26■■□□□ 1.15
CCDC144CP-203ENST00000580574 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
CCDC144CP-203ENST00000580574 PPP4R3CPQ6ZMV5 832 aa22.13■■□□□ 1.13
CCDC144CP-203ENST00000580574 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
CCDC144CP-203ENST00000580574 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
CCDC144CP-203ENST00000580574 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
CCDC144CP-203ENST00000580574 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
CCDC144CP-203ENST00000580574 SYNJ1O43426 1573 aa22■■□□□ 1.11
CCDC144CP-203ENST00000580574 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
CCDC144CP-203ENST00000580574 CEP164Q9UPV0 1460 aa21.98■■□□□ 1.11
CCDC144CP-203ENST00000580574 CUX1P39880 1505 aa21.96■■□□□ 1.11
CCDC144CP-203ENST00000580574 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
CCDC144CP-203ENST00000580574 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
CCDC144CP-203ENST00000580574 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
CCDC144CP-203ENST00000580574 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
CCDC144CP-203ENST00000580574 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
CCDC144CP-203ENST00000580574 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
CCDC144CP-203ENST00000580574 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
CCDC144CP-203ENST00000580574 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
CCDC144CP-203ENST00000580574 WDR62O43379 1518 aa21.77■■□□□ 1.08
CCDC144CP-203ENST00000580574 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
CCDC144CP-203ENST00000580574 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
CCDC144CP-203ENST00000580574 HOXD11P31277 338 aaPredicted RBP21.69■■□□□ 1.06
CCDC144CP-203ENST00000580574 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
CCDC144CP-203ENST00000580574 WDR97A6NE52 1622 aa21.64■■□□□ 1.05
CCDC144CP-203ENST00000580574 SOGA1O94964 1423 aa21.63■■□□□ 1.05
CCDC144CP-203ENST00000580574 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
CCDC144CP-203ENST00000580574 CUX2O14529 1486 aa21.61■■□□□ 1.05
CCDC144CP-203ENST00000580574 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
CCDC144CP-203ENST00000580574 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
CCDC144CP-203ENST00000580574 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
CCDC144CP-203ENST00000580574 EEA1Q15075 1411 aa21.54■■□□□ 1.04
CCDC144CP-203ENST00000580574 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
CCDC144CP-203ENST00000580574 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
CCDC144CP-203ENST00000580574 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
CCDC144CP-203ENST00000580574 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
CCDC144CP-203ENST00000580574 DCAF8L1A6NGE4 600 aa21.45■■□□□ 1.02
CCDC144CP-203ENST00000580574 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
CCDC144CP-203ENST00000580574 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
CCDC144CP-203ENST00000580574 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
CCDC144CP-203ENST00000580574 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
CCDC144CP-203ENST00000580574 IGF1RP08069 1367 aa21.36■■□□□ 1.01
CCDC144CP-203ENST00000580574 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
CCDC144CP-203ENST00000580574 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
CCDC144CP-203ENST00000580574 EIF4G3O43432 1585 aaKnown RBP21.35■■□□□ 1.01
CCDC144CP-203ENST00000580574 KIF21BO75037 1637 aa21.33■■□□□ 1.01
CCDC144CP-203ENST00000580574 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.01
CCDC144CP-203ENST00000580574 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
CCDC144CP-203ENST00000580574 PRXQ9BXM0 1461 aa21.32■■□□□ 1
CCDC144CP-203ENST00000580574 CUL7Q14999 1698 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms