RNA–Protein interactions for RNA: ENST00000578955.1

GREB1L-205, Transcript of GREB1 like retinoic acid receptor coactivator, humanhuman

TSL 2

Gene GREB1L, Length 2,882 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1L-205ENST00000578955 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
GREB1L-205ENST00000578955 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
GREB1L-205ENST00000578955 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
GREB1L-205ENST00000578955 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
GREB1L-205ENST00000578955 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
GREB1L-205ENST00000578955 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
GREB1L-205ENST00000578955 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
GREB1L-205ENST00000578955 ABCC9O60706 1549 aa19.29■□□□□ 0.68
GREB1L-205ENST00000578955 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
GREB1L-205ENST00000578955 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
GREB1L-205ENST00000578955 NACADO15069 1562 aa18.98■□□□□ 0.63
GREB1L-205ENST00000578955 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
GREB1L-205ENST00000578955 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
GREB1L-205ENST00000578955 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
GREB1L-205ENST00000578955 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
GREB1L-205ENST00000578955 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
GREB1L-205ENST00000578955 PELP1Q8IZL8 1130 aaKnown RBP18.5■□□□□ 0.55
GREB1L-205ENST00000578955 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
GREB1L-205ENST00000578955 WIZO95785 1651 aa18.39■□□□□ 0.53
GREB1L-205ENST00000578955 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
GREB1L-205ENST00000578955 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
GREB1L-205ENST00000578955 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.51
GREB1L-205ENST00000578955 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
GREB1L-205ENST00000578955 HRCP23327 699 aa18.16■□□□□ 0.5
GREB1L-205ENST00000578955 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
GREB1L-205ENST00000578955 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
GREB1L-205ENST00000578955 TOP2AP11388 1531 aaKnown RBP18.09■□□□□ 0.49
GREB1L-205ENST00000578955 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
GREB1L-205ENST00000578955 CCDC88BA6NC98 1476 aa18■□□□□ 0.47
GREB1L-205ENST00000578955 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
GREB1L-205ENST00000578955 MYT1Q01538 1121 aa17.97■□□□□ 0.47
GREB1L-205ENST00000578955 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
GREB1L-205ENST00000578955 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
GREB1L-205ENST00000578955 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
GREB1L-205ENST00000578955 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
GREB1L-205ENST00000578955 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
GREB1L-205ENST00000578955 PPARGC1BQ86YN6 1023 aaKnown RBP17.81■□□□□ 0.44
GREB1L-205ENST00000578955 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
GREB1L-205ENST00000578955 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
GREB1L-205ENST00000578955 SOGA1O94964 1423 aa17.59■□□□□ 0.41
GREB1L-205ENST00000578955 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
GREB1L-205ENST00000578955 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
GREB1L-205ENST00000578955 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
GREB1L-205ENST00000578955 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
GREB1L-205ENST00000578955 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.4
GREB1L-205ENST00000578955 SYNJ1O43426 1573 aa17.52■□□□□ 0.4
GREB1L-205ENST00000578955 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
GREB1L-205ENST00000578955 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
GREB1L-205ENST00000578955 EEA1Q15075 1411 aa17.4■□□□□ 0.38
GREB1L-205ENST00000578955 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
GREB1L-205ENST00000578955 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
GREB1L-205ENST00000578955 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
GREB1L-205ENST00000578955 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
GREB1L-205ENST00000578955 CFTRP13569 1480 aa17.32■□□□□ 0.36
GREB1L-205ENST00000578955 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
GREB1L-205ENST00000578955 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
GREB1L-205ENST00000578955 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
GREB1L-205ENST00000578955 CUX1P39880 1505 aa17.25■□□□□ 0.35
GREB1L-205ENST00000578955 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
GREB1L-205ENST00000578955 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
GREB1L-205ENST00000578955 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
GREB1L-205ENST00000578955 KIF21BO75037 1637 aa17.2■□□□□ 0.34
GREB1L-205ENST00000578955 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
GREB1L-205ENST00000578955 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
GREB1L-205ENST00000578955 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.34
GREB1L-205ENST00000578955 CLIP1P30622 1438 aa17.08■□□□□ 0.33
GREB1L-205ENST00000578955 NESP48681 1621 aa17.07■□□□□ 0.32
GREB1L-205ENST00000578955 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
GREB1L-205ENST00000578955 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
GREB1L-205ENST00000578955 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
GREB1L-205ENST00000578955 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
GREB1L-205ENST00000578955 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
GREB1L-205ENST00000578955 CUX2O14529 1486 aa17.01■□□□□ 0.31
GREB1L-205ENST00000578955 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
GREB1L-205ENST00000578955 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
GREB1L-205ENST00000578955 ACIN1Q9UKV3 1341 aaKnown RBP16.92■□□□□ 0.3
GREB1L-205ENST00000578955 IGF1RP08069 1367 aa16.91■□□□□ 0.3
GREB1L-205ENST00000578955 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
GREB1L-205ENST00000578955 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.3
GREB1L-205ENST00000578955 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
GREB1L-205ENST00000578955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
GREB1L-205ENST00000578955 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
GREB1L-205ENST00000578955 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
GREB1L-205ENST00000578955 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
GREB1L-205ENST00000578955 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
GREB1L-205ENST00000578955 APLP2Q06481 763 aa16.86■□□□□ 0.29
GREB1L-205ENST00000578955 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
GREB1L-205ENST00000578955 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
GREB1L-205ENST00000578955 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
GREB1L-205ENST00000578955 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.28
GREB1L-205ENST00000578955 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
GREB1L-205ENST00000578955 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
GREB1L-205ENST00000578955 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
GREB1L-205ENST00000578955 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
GREB1L-205ENST00000578955 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.28
GREB1L-205ENST00000578955 BCL11AQ9H165 835 aa16.77■□□□□ 0.27
GREB1L-205ENST00000578955 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
GREB1L-205ENST00000578955 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
GREB1L-205ENST00000578955 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
GREB1L-205ENST00000578955 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms