RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 AEBP2Q6ZN18 517 aaPredicted RBP30.52■■■□□ 2.48
TRAPPC8-204ENST00000578252 CHIC1Q5VXU3 224 aa29.31■■■□□ 2.28
TRAPPC8-204ENST00000578252 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
TRAPPC8-204ENST00000578252 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC8-204ENST00000578252 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC8-204ENST00000578252 FOXD1Q16676 465 aa24.17■■□□□ 1.46
TRAPPC8-204ENST00000578252 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
TRAPPC8-204ENST00000578252 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
TRAPPC8-204ENST00000578252 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
TRAPPC8-204ENST00000578252 ADRA2BP18089 450 aa22.83■■□□□ 1.25
TRAPPC8-204ENST00000578252 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC8-204ENST00000578252 MSH5O43196 834 aa22.48■■□□□ 1.19
TRAPPC8-204ENST00000578252 ABCC9O60706 1549 aa22.36■■□□□ 1.17
TRAPPC8-204ENST00000578252 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
TRAPPC8-204ENST00000578252 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
TRAPPC8-204ENST00000578252 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
TRAPPC8-204ENST00000578252 NACADO15069 1562 aa21.86■■□□□ 1.09
TRAPPC8-204ENST00000578252 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
TRAPPC8-204ENST00000578252 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
TRAPPC8-204ENST00000578252 POTEDQ86YR6 584 aa21.57■■□□□ 1.04
TRAPPC8-204ENST00000578252 SCRIBQ14160 1630 aa21.29■■□□□ 1
TRAPPC8-204ENST00000578252 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
TRAPPC8-204ENST00000578252 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
TRAPPC8-204ENST00000578252 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
TRAPPC8-204ENST00000578252 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
TRAPPC8-204ENST00000578252 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
TRAPPC8-204ENST00000578252 MAPK8IP2Q13387 824 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC8-204ENST00000578252 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
TRAPPC8-204ENST00000578252 DMRT2Q9Y5R5 561 aa20.65■□□□□ 0.9
TRAPPC8-204ENST00000578252 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
TRAPPC8-204ENST00000578252 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC8-204ENST00000578252 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
TRAPPC8-204ENST00000578252 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
TRAPPC8-204ENST00000578252 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
TRAPPC8-204ENST00000578252 CC2D2AQ9P2K1 1620 aa20.28■□□□□ 0.84
TRAPPC8-204ENST00000578252 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC8-204ENST00000578252 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
TRAPPC8-204ENST00000578252 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
TRAPPC8-204ENST00000578252 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
TRAPPC8-204ENST00000578252 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
TRAPPC8-204ENST00000578252 WIZO95785 1651 aa20.15■□□□□ 0.82
TRAPPC8-204ENST00000578252 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
TRAPPC8-204ENST00000578252 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
TRAPPC8-204ENST00000578252 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
TRAPPC8-204ENST00000578252 DNAJC5BQ9UF47 199 aa20.05■□□□□ 0.8
TRAPPC8-204ENST00000578252 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
TRAPPC8-204ENST00000578252 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC8-204ENST00000578252 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
TRAPPC8-204ENST00000578252 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
TRAPPC8-204ENST00000578252 RNF216Q9NWF9 866 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC8-204ENST00000578252 DCAF8L1A6NGE4 600 aa19.83■□□□□ 0.77
TRAPPC8-204ENST00000578252 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
TRAPPC8-204ENST00000578252 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
TRAPPC8-204ENST00000578252 KCNA4P22459 653 aa19.67■□□□□ 0.74
TRAPPC8-204ENST00000578252 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
TRAPPC8-204ENST00000578252 CADPSQ9ULU8 1353 aa19.54■□□□□ 0.72
TRAPPC8-204ENST00000578252 CFTRP13569 1480 aa19.53■□□□□ 0.72
TRAPPC8-204ENST00000578252 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
TRAPPC8-204ENST00000578252 NESP48681 1621 aa19.46■□□□□ 0.71
TRAPPC8-204ENST00000578252 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
TRAPPC8-204ENST00000578252 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
TRAPPC8-204ENST00000578252 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
TRAPPC8-204ENST00000578252 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
TRAPPC8-204ENST00000578252 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
TRAPPC8-204ENST00000578252 RNF39Q9H2S5 420 aa19.21■□□□□ 0.67
TRAPPC8-204ENST00000578252 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
TRAPPC8-204ENST00000578252 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
TRAPPC8-204ENST00000578252 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
TRAPPC8-204ENST00000578252 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
TRAPPC8-204ENST00000578252 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
TRAPPC8-204ENST00000578252 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC8-204ENST00000578252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRAPPC8-204ENST00000578252 WDR62O43379 1518 aa19.1■□□□□ 0.65
TRAPPC8-204ENST00000578252 URB2Q14146 1524 aaKnown RBP19.09■□□□□ 0.65
TRAPPC8-204ENST00000578252 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
TRAPPC8-204ENST00000578252 CUX1P39880 1505 aa19.06■□□□□ 0.64
TRAPPC8-204ENST00000578252 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
TRAPPC8-204ENST00000578252 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
TRAPPC8-204ENST00000578252 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
TRAPPC8-204ENST00000578252 CUX2O14529 1486 aa18.97■□□□□ 0.63
TRAPPC8-204ENST00000578252 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
TRAPPC8-204ENST00000578252 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
TRAPPC8-204ENST00000578252 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC8-204ENST00000578252 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
TRAPPC8-204ENST00000578252 IFT140Q96RY7 1462 aa18.87■□□□□ 0.61
TRAPPC8-204ENST00000578252 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
TRAPPC8-204ENST00000578252 SOGA1O94964 1423 aa18.84■□□□□ 0.61
TRAPPC8-204ENST00000578252 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
TRAPPC8-204ENST00000578252 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
TRAPPC8-204ENST00000578252 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
TRAPPC8-204ENST00000578252 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
TRAPPC8-204ENST00000578252 U3KPZ7 1027 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC8-204ENST00000578252 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.58
TRAPPC8-204ENST00000578252 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
TRAPPC8-204ENST00000578252 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
TRAPPC8-204ENST00000578252 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC8-204ENST00000578252 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
TRAPPC8-204ENST00000578252 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
TRAPPC8-204ENST00000578252 EEA1Q15075 1411 aa18.65■□□□□ 0.58
TRAPPC8-204ENST00000578252 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms