RNA–Protein interactions for RNA: ENST00000574006.5

KCNAB3-205, Transcript of potassium voltage-gated channel subfamily A regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNAB3, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3-205ENST00000574006 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
KCNAB3-205ENST00000574006 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
KCNAB3-205ENST00000574006 ABCC9O60706 1549 aa15.65■□□□□ 0.1
KCNAB3-205ENST00000574006 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
KCNAB3-205ENST00000574006 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
KCNAB3-205ENST00000574006 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
KCNAB3-205ENST00000574006 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
KCNAB3-205ENST00000574006 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
KCNAB3-205ENST00000574006 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
KCNAB3-205ENST00000574006 CUX2O14529 1486 aa14.05□□□□□ -0.16
KCNAB3-205ENST00000574006 ILDR1Q86SU0 546 aaPredicted RBP13.98□□□□□ -0.17
KCNAB3-205ENST00000574006 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
KCNAB3-205ENST00000574006 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
KCNAB3-205ENST00000574006 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
KCNAB3-205ENST00000574006 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
KCNAB3-205ENST00000574006 NACADO15069 1562 aa13.64□□□□□ -0.23
KCNAB3-205ENST00000574006 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
KCNAB3-205ENST00000574006 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
KCNAB3-205ENST00000574006 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
KCNAB3-205ENST00000574006 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
KCNAB3-205ENST00000574006 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
KCNAB3-205ENST00000574006 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
KCNAB3-205ENST00000574006 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
KCNAB3-205ENST00000574006 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
KCNAB3-205ENST00000574006 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
KCNAB3-205ENST00000574006 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
KCNAB3-205ENST00000574006 SOCS7O14512 581 aa13.1□□□□□ -0.31
KCNAB3-205ENST00000574006 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
KCNAB3-205ENST00000574006 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
KCNAB3-205ENST00000574006 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
KCNAB3-205ENST00000574006 NESP48681 1621 aa13□□□□□ -0.33
KCNAB3-205ENST00000574006 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
KCNAB3-205ENST00000574006 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
KCNAB3-205ENST00000574006 FBXO41Q8TF61 875 aa12.94□□□□□ -0.34
KCNAB3-205ENST00000574006 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
KCNAB3-205ENST00000574006 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
KCNAB3-205ENST00000574006 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
KCNAB3-205ENST00000574006 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
KCNAB3-205ENST00000574006 ARAP1Q96P48 1450 aa12.74□□□□□ -0.37
KCNAB3-205ENST00000574006 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
KCNAB3-205ENST00000574006 NCAPD3P42695 1498 aa12.68□□□□□ -0.38
KCNAB3-205ENST00000574006 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
KCNAB3-205ENST00000574006 KIF21AQ7Z4S6 1674 aa12.64□□□□□ -0.39
KCNAB3-205ENST00000574006 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
KCNAB3-205ENST00000574006 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
KCNAB3-205ENST00000574006 WDR62O43379 1518 aa12.56□□□□□ -0.4
KCNAB3-205ENST00000574006 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
KCNAB3-205ENST00000574006 HECW2Q9P2P5 1572 aa12.51□□□□□ -0.41
KCNAB3-205ENST00000574006 SYNJ2O15056 1496 aa12.42□□□□□ -0.42
KCNAB3-205ENST00000574006 ATAD2BQ9ULI0 1458 aa12.42□□□□□ -0.42
KCNAB3-205ENST00000574006 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
KCNAB3-205ENST00000574006 HMGXB3Q12766 1538 aa12.35□□□□□ -0.43
KCNAB3-205ENST00000574006 CADPSQ9ULU8 1353 aa12.26□□□□□ -0.45
KCNAB3-205ENST00000574006 FBLN2P98095 1184 aa12.25□□□□□ -0.45
KCNAB3-205ENST00000574006 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
KCNAB3-205ENST00000574006 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
KCNAB3-205ENST00000574006 ADGRL1O94910 1474 aa12.21□□□□□ -0.45
KCNAB3-205ENST00000574006 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
KCNAB3-205ENST00000574006 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
KCNAB3-205ENST00000574006 DCAF1Q9Y4B6 1507 aa12.19□□□□□ -0.46
KCNAB3-205ENST00000574006 SMARCA4P51532 1647 aa12.12□□□□□ -0.47
KCNAB3-205ENST00000574006 CHD1O14646 1710 aa12.12□□□□□ -0.47
KCNAB3-205ENST00000574006 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.47
KCNAB3-205ENST00000574006 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.47
KCNAB3-205ENST00000574006 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
KCNAB3-205ENST00000574006 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
KCNAB3-205ENST00000574006 FAM69CQ0P6D2 419 aa12.07□□□□□ -0.48
KCNAB3-205ENST00000574006 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
KCNAB3-205ENST00000574006 KDM6BO15054 1643 aa12.06□□□□□ -0.48
KCNAB3-205ENST00000574006 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
KCNAB3-205ENST00000574006 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
KCNAB3-205ENST00000574006 CLASP1Q7Z460 1538 aa12.01□□□□□ -0.49
KCNAB3-205ENST00000574006 EIF4G3O43432 1585 aaKnown RBP11.95□□□□□ -0.5
KCNAB3-205ENST00000574006 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
KCNAB3-205ENST00000574006 ABCC10Q5T3U5 1492 aa11.9□□□□□ -0.5
KCNAB3-205ENST00000574006 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
KCNAB3-205ENST00000574006 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
KCNAB3-205ENST00000574006 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
KCNAB3-205ENST00000574006 CFTRP13569 1480 aa11.75□□□□□ -0.53
KCNAB3-205ENST00000574006 DIP2BQ9P265 1576 aa11.75□□□□□ -0.53
KCNAB3-205ENST00000574006 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
KCNAB3-205ENST00000574006 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
KCNAB3-205ENST00000574006 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
KCNAB3-205ENST00000574006 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
KCNAB3-205ENST00000574006 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
KCNAB3-205ENST00000574006 HSPA2P54652 639 aa11.67□□□□□ -0.54
KCNAB3-205ENST00000574006 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
KCNAB3-205ENST00000574006 PCF11O94913 1555 aaKnown RBP11.66□□□□□ -0.54
KCNAB3-205ENST00000574006 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
KCNAB3-205ENST00000574006 TDRD9Q8NDG6 1382 aaKnown RBP11.65□□□□□ -0.55
KCNAB3-205ENST00000574006 MAPKBP1O60336 1514 aa11.65□□□□□ -0.55
KCNAB3-205ENST00000574006 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
KCNAB3-205ENST00000574006 PTPRMP28827 1452 aa11.59□□□□□ -0.55
KCNAB3-205ENST00000574006 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
KCNAB3-205ENST00000574006 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
KCNAB3-205ENST00000574006 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
KCNAB3-205ENST00000574006 CEP170Q5SW79 1584 aa11.54□□□□□ -0.56
KCNAB3-205ENST00000574006 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
KCNAB3-205ENST00000574006 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
KCNAB3-205ENST00000574006 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms