RNA–Protein interactions for RNA: ENST00000569920.1

LCMT1-AS1-204, LCMT1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene LCMT1-AS1, Length 474 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-AS1-204ENST00000569920 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
LCMT1-AS1-204ENST00000569920 CHIC1Q5VXU3 224 aa15.4■□□□□ 0.06
LCMT1-AS1-204ENST00000569920 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
LCMT1-AS1-204ENST00000569920 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
LCMT1-AS1-204ENST00000569920 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
LCMT1-AS1-204ENST00000569920 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
LCMT1-AS1-204ENST00000569920 FOXD1Q16676 465 aa13.27□□□□□ -0.29
LCMT1-AS1-204ENST00000569920 MSH5O43196 834 aa12.88□□□□□ -0.35
LCMT1-AS1-204ENST00000569920 PIAS4Q8N2W9 510 aaPredicted RBP12.21□□□□□ -0.45
LCMT1-AS1-204ENST00000569920 CCDC180Q9P1Z9 1646 aa11.78□□□□□ -0.52
LCMT1-AS1-204ENST00000569920 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.54
LCMT1-AS1-204ENST00000569920 ADRA2BP18089 450 aa11.57□□□□□ -0.56
LCMT1-AS1-204ENST00000569920 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
LCMT1-AS1-204ENST00000569920 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
LCMT1-AS1-204ENST00000569920 ZCCHC6Q5VYS8 1495 aaKnown RBP11.32□□□□□ -0.6
LCMT1-AS1-204ENST00000569920 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.61
LCMT1-AS1-204ENST00000569920 MYO15BQ96JP2 1530 aa11.11□□□□□ -0.63
LCMT1-AS1-204ENST00000569920 DMRT2Q9Y5R5 561 aa11.1□□□□□ -0.63
LCMT1-AS1-204ENST00000569920 DCAF8L2P0C7V8 631 aa11.08□□□□□ -0.64
LCMT1-AS1-204ENST00000569920 ABCC9O60706 1549 aa11.08□□□□□ -0.64
LCMT1-AS1-204ENST00000569920 NACADO15069 1562 aa11□□□□□ -0.65
LCMT1-AS1-204ENST00000569920 RB1CC1Q8TDY2 1594 aa10.9□□□□□ -0.67
LCMT1-AS1-204ENST00000569920 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
LCMT1-AS1-204ENST00000569920 MAPK8IP2Q13387 824 aaPredicted RBP10.87□□□□□ -0.67
LCMT1-AS1-204ENST00000569920 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
LCMT1-AS1-204ENST00000569920 POTEHQ6S545 545 aa10.83□□□□□ -0.68
LCMT1-AS1-204ENST00000569920 SCAF1Q9H7N4 1312 aaKnown RBP10.77□□□□□ -0.69
LCMT1-AS1-204ENST00000569920 SCRIBQ14160 1630 aa10.75□□□□□ -0.69
LCMT1-AS1-204ENST00000569920 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
LCMT1-AS1-204ENST00000569920 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
LCMT1-AS1-204ENST00000569920 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
LCMT1-AS1-204ENST00000569920 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
LCMT1-AS1-204ENST00000569920 BICRAQ9NZM4 1560 aa10.48□□□□□ -0.73
LCMT1-AS1-204ENST00000569920 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
LCMT1-AS1-204ENST00000569920 RSF1Q96T23 1441 aaPredicted RBP10.44□□□□□ -0.74
LCMT1-AS1-204ENST00000569920 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
LCMT1-AS1-204ENST00000569920 CECR2Q9BXF3 1484 aa10.41□□□□□ -0.74
LCMT1-AS1-204ENST00000569920 MROH2BQ7Z745 1585 aa10.36□□□□□ -0.75
LCMT1-AS1-204ENST00000569920 SMARCA4P51532 1647 aa10.34□□□□□ -0.75
LCMT1-AS1-204ENST00000569920 HOXD11P31277 338 aaPredicted RBP10.34□□□□□ -0.75
LCMT1-AS1-204ENST00000569920 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
LCMT1-AS1-204ENST00000569920 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
LCMT1-AS1-204ENST00000569920 WIZO95785 1651 aa10.25□□□□□ -0.77
LCMT1-AS1-204ENST00000569920 SMARCA2P51531 1590 aa10.23□□□□□ -0.77
LCMT1-AS1-204ENST00000569920 TOP2AP11388 1531 aaKnown RBP10.23□□□□□ -0.77
LCMT1-AS1-204ENST00000569920 EIF4G1Q04637 1599 aaKnown RBP10.2□□□□□ -0.78
LCMT1-AS1-204ENST00000569920 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
LCMT1-AS1-204ENST00000569920 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
LCMT1-AS1-204ENST00000569920 NCAPD3P42695 1498 aa10.14□□□□□ -0.79
LCMT1-AS1-204ENST00000569920 HMGXB3Q12766 1538 aa10.12□□□□□ -0.79
LCMT1-AS1-204ENST00000569920 CCDC88BA6NC98 1476 aa10.09□□□□□ -0.79
LCMT1-AS1-204ENST00000569920 RNF216Q9NWF9 866 aaPredicted RBP10.04□□□□□ -0.8
LCMT1-AS1-204ENST00000569920 CC2D2AQ9P2K1 1620 aa10.03□□□□□ -0.8
LCMT1-AS1-204ENST00000569920 TRIM41Q8WV44 630 aa9.94□□□□□ -0.82
LCMT1-AS1-204ENST00000569920 CFTRP13569 1480 aa9.9□□□□□ -0.83
LCMT1-AS1-204ENST00000569920 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
LCMT1-AS1-204ENST00000569920 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
LCMT1-AS1-204ENST00000569920 WRNQ14191 1432 aaPredicted RBP eCLIP9.85□□□□□ -0.83
LCMT1-AS1-204ENST00000569920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
LCMT1-AS1-204ENST00000569920 DSG3P32926 999 aa9.83□□□□□ -0.84
LCMT1-AS1-204ENST00000569920 ABCC8Q09428 1581 aa9.81□□□□□ -0.84
LCMT1-AS1-204ENST00000569920 PPP4R3CPQ6ZMV5 832 aa9.81□□□□□ -0.84
LCMT1-AS1-204ENST00000569920 LAMC3Q9Y6N6 1575 aa9.8□□□□□ -0.84
LCMT1-AS1-204ENST00000569920 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
LCMT1-AS1-204ENST00000569920 EEA1Q15075 1411 aa9.79□□□□□ -0.84
LCMT1-AS1-204ENST00000569920 TOP2BQ02880 1626 aa9.75□□□□□ -0.85
LCMT1-AS1-204ENST00000569920 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
LCMT1-AS1-204ENST00000569920 FANCD2Q9BXW9 1451 aa9.75□□□□□ -0.85
LCMT1-AS1-204ENST00000569920 SP7Q8TDD2 431 aaPredicted RBP9.74□□□□□ -0.85
LCMT1-AS1-204ENST00000569920 SYNJ1O43426 1573 aa9.74□□□□□ -0.85
LCMT1-AS1-204ENST00000569920 BIVM-ERCC5R4GMW8 1640 aa9.73□□□□□ -0.85
LCMT1-AS1-204ENST00000569920 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 CUX1P39880 1505 aa9.7□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 NESP48681 1621 aa9.69□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 CAPN15O75808 1086 aa9.68□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 FAM9AQ8IZU1 332 aaPredicted RBP9.67□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 CSRNP3Q8WYN3 585 aa9.66□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 SOGA1O94964 1423 aa9.65□□□□□ -0.86
LCMT1-AS1-204ENST00000569920 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 CHRDL2Q6WN34 429 aa9.59□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 URB2Q14146 1524 aaKnown RBP9.59□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 GOLGA3Q08378 1498 aa9.59□□□□□ -0.87
LCMT1-AS1-204ENST00000569920 RUSC2Q8N2Y8 1516 aa9.58□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 ABCA10Q8WWZ4 1543 aa9.57□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 KIF21BO75037 1637 aa9.57□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 CUX2O14529 1486 aa9.57□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 KIF21AQ7Z4S6 1674 aa9.57□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 ERCC6Q03468 1493 aa9.56□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 TNIKQ9UKE5 1360 aa9.56□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 ERICH3Q5RHP9 1530 aa9.54□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 WDR62O43379 1518 aa9.52□□□□□ -0.88
LCMT1-AS1-204ENST00000569920 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms