RNA–Protein interactions for RNA: ENST00000565890.1

SPATA33-204, Transcript of spermatogenesis associated 33, humanhuman

TSL 2

Gene SPATA33, Length 2,368 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA33-204ENST00000565890 NISCHQ9Y2I1 1504 aa50.92■■■■■ 5.74
SPATA33-204ENST00000565890 CCDC180Q9P1Z9 1646 aa44.08■■■■■ 4.65
SPATA33-204ENST00000565890 ZCCHC6Q5VYS8 1495 aaKnown RBP42.83■■■■■ 4.45
SPATA33-204ENST00000565890 SHROOM4Q9ULL8 1493 aa42.5■■■■■ 4.39
SPATA33-204ENST00000565890 DCAF8L2P0C7V8 631 aa42.15■■■■■ 4.34
SPATA33-204ENST00000565890 DCAF1Q9Y4B6 1507 aa41.94■■■■■ 4.31
SPATA33-204ENST00000565890 ABCC9O60706 1549 aa41.67■■■■■ 4.26
SPATA33-204ENST00000565890 SUPT5HO00267 1087 aaKnown RBP41.65■■■■■ 4.26
SPATA33-204ENST00000565890 MYO15BQ96JP2 1530 aa41.27■■■■■ 4.2
SPATA33-204ENST00000565890 NACADO15069 1562 aa41■■■■■ 4.15
SPATA33-204ENST00000565890 SCRIBQ14160 1630 aa40.83■■■■■ 4.13
SPATA33-204ENST00000565890 CHIC1Q5VXU3 224 aa40.62■■■■■ 4.09
SPATA33-204ENST00000565890 RB1CC1Q8TDY2 1594 aa40.59■■■■■ 4.09
SPATA33-204ENST00000565890 HRCP23327 699 aa40.02■■■■■ 4
SPATA33-204ENST00000565890 UNC13AQ9UPW8 1703 aa39.97■■■■□ 3.99
SPATA33-204ENST00000565890 RSF1Q96T23 1441 aaPredicted RBP39.7■■■■□ 3.95
SPATA33-204ENST00000565890 CECR2Q9BXF3 1484 aa39.7■■■■□ 3.95
SPATA33-204ENST00000565890 BICRAQ9NZM4 1560 aa39.53■■■■□ 3.92
SPATA33-204ENST00000565890 MROH2BQ7Z745 1585 aa39.46■■■■□ 3.91
SPATA33-204ENST00000565890 PABPN1Q86U42 306 aaKnown RBP eCLIP39.45■■■■□ 3.91
SPATA33-204ENST00000565890 LOC105371045A0A1W2PR82 267 aa39.31■■■■□ 3.88
SPATA33-204ENST00000565890 BAZ1AQ9NRL2 1556 aaPredicted RBP39.22■■■■□ 3.87
SPATA33-204ENST00000565890 PCGF6Q9BYE7 350 aa39.21■■■■□ 3.87
SPATA33-204ENST00000565890 WIZO95785 1651 aa39.16■■■■□ 3.86
SPATA33-204ENST00000565890 PELP1Q8IZL8 1130 aaKnown RBP39.13■■■■□ 3.85
SPATA33-204ENST00000565890 SMARCA4P51532 1647 aa39.07■■■■□ 3.84
SPATA33-204ENST00000565890 PPARGC1BQ86YN6 1023 aaKnown RBP39.06■■■■□ 3.84
SPATA33-204ENST00000565890 TRIM41Q8WV44 630 aa38.88■■■■□ 3.81
SPATA33-204ENST00000565890 TOP2AP11388 1531 aaKnown RBP38.61■■■■□ 3.77
SPATA33-204ENST00000565890 TRIM26Q12899 539 aaPredicted RBP38.58■■■■□ 3.77
SPATA33-204ENST00000565890 PEG3Q9GZU2 1588 aa38.5■■■■□ 3.75
SPATA33-204ENST00000565890 FAM9AQ8IZU1 332 aaPredicted RBP38.45■■■■□ 3.75
SPATA33-204ENST00000565890 ATAD2BQ9ULI0 1458 aa38.36■■■■□ 3.73
SPATA33-204ENST00000565890 EIF4G1Q04637 1599 aaKnown RBP38.35■■■■□ 3.73
SPATA33-204ENST00000565890 SMARCA2P51531 1590 aa38.34■■■■□ 3.73
SPATA33-204ENST00000565890 CCDC88BA6NC98 1476 aa38.34■■■■□ 3.73
SPATA33-204ENST00000565890 BAZ1BQ9UIG0 1483 aaKnown RBP38.14■■■■□ 3.7
SPATA33-204ENST00000565890 EHMT2Q96KQ7 1210 aa38.02■■■■□ 3.68
SPATA33-204ENST00000565890 SCAF1Q9H7N4 1312 aaKnown RBP38.02■■■■□ 3.68
SPATA33-204ENST00000565890 NCAPD3P42695 1498 aa37.91■■■■□ 3.66
SPATA33-204ENST00000565890 ABCC8Q09428 1581 aa37.84■■■■□ 3.65
SPATA33-204ENST00000565890 HMGXB3Q12766 1538 aa37.84■■■■□ 3.65
SPATA33-204ENST00000565890 ZEB1P37275 1124 aaPredicted RBP37.75■■■■□ 3.63
SPATA33-204ENST00000565890 MYT1Q01538 1121 aa37.71■■■■□ 3.63
SPATA33-204ENST00000565890 CC2D2AQ9P2K1 1620 aa37.64■■■■□ 3.62
SPATA33-204ENST00000565890 SOGA1O94964 1423 aa37.47■■■■□ 3.59
SPATA33-204ENST00000565890 EEA1Q15075 1411 aa37.38■■■■□ 3.57
SPATA33-204ENST00000565890 WRNQ14191 1432 aaPredicted RBP eCLIP37.34■■■■□ 3.57
SPATA33-204ENST00000565890 CEP162Q5TB80 1403 aa37.31■■■■□ 3.56
SPATA33-204ENST00000565890 TNIKQ9UKE5 1360 aa37.29■■■■□ 3.56
SPATA33-204ENST00000565890 RUSC2Q8N2Y8 1516 aa37.28■■■■□ 3.56
SPATA33-204ENST00000565890 CSRNP3Q8WYN3 585 aa37.24■■■■□ 3.55
SPATA33-204ENST00000565890 SYNJ1O43426 1573 aa37.22■■■■□ 3.55
SPATA33-204ENST00000565890 CFTRP13569 1480 aa37.2■■■■□ 3.55
SPATA33-204ENST00000565890 GOLGA3Q08378 1498 aa37.09■■■■□ 3.53
SPATA33-204ENST00000565890 CADPSQ9ULU8 1353 aa37■■■■□ 3.51
SPATA33-204ENST00000565890 UBTFP17480 764 aaKnown RBP37■■■■□ 3.51
SPATA33-204ENST00000565890 ACIN1Q9UKV3 1341 aaKnown RBP36.99■■■■□ 3.51
SPATA33-204ENST00000565890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.96■■■■□ 3.51
SPATA33-204ENST00000565890 PRDM2Q13029 1718 aa36.94■■■■□ 3.5
SPATA33-204ENST00000565890 TOP2BQ02880 1626 aa36.93■■■■□ 3.5
SPATA33-204ENST00000565890 DNAJC5BQ9UF47 199 aa36.91■■■■□ 3.5
SPATA33-204ENST00000565890 KIF21BO75037 1637 aa36.91■■■■□ 3.5
SPATA33-204ENST00000565890 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.49
SPATA33-204ENST00000565890 CCER1Q8TC90 406 aaPredicted RBP36.88■■■■□ 3.49
SPATA33-204ENST00000565890 BIVM-ERCC5R4GMW8 1640 aa36.86■■■■□ 3.49
SPATA33-204ENST00000565890 CUX1P39880 1505 aa36.84■■■■□ 3.49
SPATA33-204ENST00000565890 NEUROD1Q13562 356 aa36.84■■■■□ 3.49
SPATA33-204ENST00000565890 TTBK1Q5TCY1 1321 aaPredicted RBP36.83■■■■□ 3.49
SPATA33-204ENST00000565890 NESP48681 1621 aa36.74■■■■□ 3.47
SPATA33-204ENST00000565890 GTF3C3Q9Y5Q9 886 aa36.64■■■■□ 3.46
SPATA33-204ENST00000565890 FANCD2Q9BXW9 1451 aa36.62■■■■□ 3.45
SPATA33-204ENST00000565890 CLIP1P30622 1438 aa36.62■■■■□ 3.45
SPATA33-204ENST00000565890 RAPGEF2Q9Y4G8 1499 aa36.58■■■■□ 3.45
SPATA33-204ENST00000565890 LAMC3Q9Y6N6 1575 aa36.52■■■■□ 3.44
SPATA33-204ENST00000565890 VPS8Q8N3P4 1428 aa36.49■■■■□ 3.43
SPATA33-204ENST00000565890 CENPBP07199 599 aaPredicted RBP36.41■■■■□ 3.42
SPATA33-204ENST00000565890 FGD5Q6ZNL6 1462 aa36.36■■■■□ 3.41
SPATA33-204ENST00000565890 ERICH3Q5RHP9 1530 aa36.32■■■■□ 3.4
SPATA33-204ENST00000565890 PRXQ9BXM0 1461 aa36.3■■■■□ 3.4
SPATA33-204ENST00000565890 DNMBPQ6XZF7 1577 aa36.29■■■■□ 3.4
SPATA33-204ENST00000565890 KIF27Q86VH2 1401 aa36.28■■■■□ 3.4
SPATA33-204ENST00000565890 TOPBP1Q92547 1522 aa36.27■■■■□ 3.4
SPATA33-204ENST00000565890 PDS5BQ9NTI5 1447 aa36.24■■■■□ 3.39
SPATA33-204ENST00000565890 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.39
SPATA33-204ENST00000565890 URB2Q14146 1524 aaKnown RBP36.2■■■■□ 3.39
SPATA33-204ENST00000565890 CUX2O14529 1486 aa36.19■■■■□ 3.38
SPATA33-204ENST00000565890 APLP2Q06481 763 aa36.18■■■■□ 3.38
SPATA33-204ENST00000565890 RANGAP1P46060 587 aaPredicted RBP36.15■■■■□ 3.38
SPATA33-204ENST00000565890 DIEXFQ68CQ4 756 aaKnown RBP36.15■■■■□ 3.38
SPATA33-204ENST00000565890 POLA1P09884 1462 aaPredicted RBP36.14■■■■□ 3.38
SPATA33-204ENST00000565890 HNRNPUL2Q1KMD3 747 aaKnown RBP36.14■■■■□ 3.38
SPATA33-204ENST00000565890 RAD54L2Q9Y4B4 1467 aa36.11■■■■□ 3.37
SPATA33-204ENST00000565890 ARAP1Q96P48 1450 aa36.08■■■■□ 3.37
SPATA33-204ENST00000565890 IGF1RP08069 1367 aa36.02■■■■□ 3.36
SPATA33-204ENST00000565890 ABCA10Q8WWZ4 1543 aa35.98■■■■□ 3.35
SPATA33-204ENST00000565890 ZNF316A6NFI3 1004 aaPredicted RBP35.94■■■■□ 3.34
SPATA33-204ENST00000565890 WDR97A6NE52 1622 aa35.85■■■■□ 3.33
SPATA33-204ENST00000565890 CARMIL1Q5VZK9 1371 aa35.81■■■■□ 3.32
SPATA33-204ENST00000565890 MRC2Q9UBG0 1479 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 512 ms