RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-215ENST00000565507 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
SCAPER-215ENST00000565507 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
SCAPER-215ENST00000565507 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
SCAPER-215ENST00000565507 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
SCAPER-215ENST00000565507 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
SCAPER-215ENST00000565507 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
SCAPER-215ENST00000565507 ABCC9O60706 1549 aa22.77■■□□□ 1.24
SCAPER-215ENST00000565507 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
SCAPER-215ENST00000565507 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
SCAPER-215ENST00000565507 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
SCAPER-215ENST00000565507 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
SCAPER-215ENST00000565507 NACADO15069 1562 aa22.16■■□□□ 1.14
SCAPER-215ENST00000565507 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
SCAPER-215ENST00000565507 CECR2Q9BXF3 1484 aa21.79■■□□□ 1.08
SCAPER-215ENST00000565507 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
SCAPER-215ENST00000565507 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
SCAPER-215ENST00000565507 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
SCAPER-215ENST00000565507 HRCP23327 699 aa21.64■■□□□ 1.05
SCAPER-215ENST00000565507 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
SCAPER-215ENST00000565507 LOC105371045A0A1W2PR82 267 aa21.56■■□□□ 1.04
SCAPER-215ENST00000565507 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
SCAPER-215ENST00000565507 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
SCAPER-215ENST00000565507 WIZO95785 1651 aa21.44■■□□□ 1.02
SCAPER-215ENST00000565507 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
SCAPER-215ENST00000565507 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
SCAPER-215ENST00000565507 SMARCA4P51532 1647 aa21.25■□□□□ 0.99
SCAPER-215ENST00000565507 TRIM26Q12899 539 aaPredicted RBP21.18■□□□□ 0.98
SCAPER-215ENST00000565507 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
SCAPER-215ENST00000565507 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
SCAPER-215ENST00000565507 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
SCAPER-215ENST00000565507 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
SCAPER-215ENST00000565507 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
SCAPER-215ENST00000565507 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
SCAPER-215ENST00000565507 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
SCAPER-215ENST00000565507 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.93
SCAPER-215ENST00000565507 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
SCAPER-215ENST00000565507 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
SCAPER-215ENST00000565507 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
SCAPER-215ENST00000565507 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
SCAPER-215ENST00000565507 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
SCAPER-215ENST00000565507 SOGA1O94964 1423 aa20.48■□□□□ 0.87
SCAPER-215ENST00000565507 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
SCAPER-215ENST00000565507 CC2D2AQ9P2K1 1620 aa20.45■□□□□ 0.86
SCAPER-215ENST00000565507 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
SCAPER-215ENST00000565507 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
SCAPER-215ENST00000565507 EEA1Q15075 1411 aa20.4■□□□□ 0.86
SCAPER-215ENST00000565507 CEP162Q5TB80 1403 aa20.4■□□□□ 0.86
SCAPER-215ENST00000565507 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.85
SCAPER-215ENST00000565507 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
SCAPER-215ENST00000565507 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
SCAPER-215ENST00000565507 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
SCAPER-215ENST00000565507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
SCAPER-215ENST00000565507 GOLGA3Q08378 1498 aa20.24■□□□□ 0.83
SCAPER-215ENST00000565507 CFTRP13569 1480 aa20.24■□□□□ 0.83
SCAPER-215ENST00000565507 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
SCAPER-215ENST00000565507 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
SCAPER-215ENST00000565507 TTBK1Q5TCY1 1321 aaPredicted RBP20.14■□□□□ 0.82
SCAPER-215ENST00000565507 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.81
SCAPER-215ENST00000565507 CUX1P39880 1505 aa20.14■□□□□ 0.81
SCAPER-215ENST00000565507 CEP164Q9UPV0 1460 aa20.13■□□□□ 0.81
SCAPER-215ENST00000565507 KIF21BO75037 1637 aa20.13■□□□□ 0.81
SCAPER-215ENST00000565507 NESP48681 1621 aa20.13■□□□□ 0.81
SCAPER-215ENST00000565507 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
SCAPER-215ENST00000565507 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
SCAPER-215ENST00000565507 CLIP1P30622 1438 aa20■□□□□ 0.79
SCAPER-215ENST00000565507 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
SCAPER-215ENST00000565507 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
SCAPER-215ENST00000565507 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
SCAPER-215ENST00000565507 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
SCAPER-215ENST00000565507 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
SCAPER-215ENST00000565507 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
SCAPER-215ENST00000565507 DIEXFQ68CQ4 756 aaKnown RBP19.87■□□□□ 0.77
SCAPER-215ENST00000565507 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
SCAPER-215ENST00000565507 PRXQ9BXM0 1461 aa19.82■□□□□ 0.76
SCAPER-215ENST00000565507 CUX2O14529 1486 aa19.82■□□□□ 0.76
SCAPER-215ENST00000565507 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
SCAPER-215ENST00000565507 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
SCAPER-215ENST00000565507 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
SCAPER-215ENST00000565507 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
SCAPER-215ENST00000565507 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
SCAPER-215ENST00000565507 APLP2Q06481 763 aa19.75■□□□□ 0.75
SCAPER-215ENST00000565507 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
SCAPER-215ENST00000565507 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
SCAPER-215ENST00000565507 ACIN1Q9UKV3 1341 aaKnown RBP19.74■□□□□ 0.75
SCAPER-215ENST00000565507 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
SCAPER-215ENST00000565507 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
SCAPER-215ENST00000565507 IGF1RP08069 1367 aa19.72■□□□□ 0.75
SCAPER-215ENST00000565507 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
SCAPER-215ENST00000565507 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
SCAPER-215ENST00000565507 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
SCAPER-215ENST00000565507 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
SCAPER-215ENST00000565507 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
SCAPER-215ENST00000565507 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
SCAPER-215ENST00000565507 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
SCAPER-215ENST00000565507 KANK4Q5T7N3 995 aaPredicted RBP19.59■□□□□ 0.73
SCAPER-215ENST00000565507 CENPBP07199 599 aaPredicted RBP19.58■□□□□ 0.72
SCAPER-215ENST00000565507 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
SCAPER-215ENST00000565507 ARHGAP35Q9NRY4 1499 aa19.53■□□□□ 0.72
SCAPER-215ENST00000565507 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
SCAPER-215ENST00000565507 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms