RNA–Protein interactions for RNA: ENST00000564037.1

GBP3-209, Transcript of guanylate binding protein 3, humanhuman

TSL 3

Gene GBP3, Length 512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-209ENST00000564037 NISCHQ9Y2I1 1504 aa17.32■□□□□ 0.36
GBP3-209ENST00000564037 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
GBP3-209ENST00000564037 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
GBP3-209ENST00000564037 ABCC9O60706 1549 aa16.69■□□□□ 0.26
GBP3-209ENST00000564037 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
GBP3-209ENST00000564037 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
GBP3-209ENST00000564037 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
GBP3-209ENST00000564037 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
GBP3-209ENST00000564037 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
GBP3-209ENST00000564037 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
GBP3-209ENST00000564037 CECR2Q9BXF3 1484 aa15.19■□□□□ 0.02
GBP3-209ENST00000564037 CC2D2AQ9P2K1 1620 aa15.02□□□□□ -0.01
GBP3-209ENST00000564037 CUX2O14529 1486 aa14.97□□□□□ -0.01
GBP3-209ENST00000564037 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
GBP3-209ENST00000564037 NACADO15069 1562 aa14.9□□□□□ -0.02
GBP3-209ENST00000564037 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
GBP3-209ENST00000564037 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
GBP3-209ENST00000564037 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
GBP3-209ENST00000564037 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
GBP3-209ENST00000564037 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
GBP3-209ENST00000564037 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
GBP3-209ENST00000564037 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
GBP3-209ENST00000564037 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
GBP3-209ENST00000564037 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
GBP3-209ENST00000564037 PHF23Q9BUL5 403 aaPredicted RBP14.31□□□□□ -0.12
GBP3-209ENST00000564037 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
GBP3-209ENST00000564037 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
GBP3-209ENST00000564037 SUPT5HO00267 1087 aaKnown RBP14.08□□□□□ -0.16
GBP3-209ENST00000564037 THOC2Q8NI27 1593 aaKnown RBP14.08□□□□□ -0.16
GBP3-209ENST00000564037 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
GBP3-209ENST00000564037 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
GBP3-209ENST00000564037 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
GBP3-209ENST00000564037 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
GBP3-209ENST00000564037 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
GBP3-209ENST00000564037 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
GBP3-209ENST00000564037 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
GBP3-209ENST00000564037 NESP48681 1621 aa13.93□□□□□ -0.18
GBP3-209ENST00000564037 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
GBP3-209ENST00000564037 ARHGEF11O15085 1522 aa13.82□□□□□ -0.2
GBP3-209ENST00000564037 CYB5RLQ6IPT4 315 aa13.81□□□□□ -0.2
GBP3-209ENST00000564037 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
GBP3-209ENST00000564037 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
GBP3-209ENST00000564037 FOXD1Q16676 465 aa13.69□□□□□ -0.22
GBP3-209ENST00000564037 LAMC3Q9Y6N6 1575 aa13.69□□□□□ -0.22
GBP3-209ENST00000564037 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
GBP3-209ENST00000564037 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
GBP3-209ENST00000564037 WDR62O43379 1518 aa13.59□□□□□ -0.23
GBP3-209ENST00000564037 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
GBP3-209ENST00000564037 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
GBP3-209ENST00000564037 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
GBP3-209ENST00000564037 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
GBP3-209ENST00000564037 SOCS7O14512 581 aa13.52□□□□□ -0.25
GBP3-209ENST00000564037 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
GBP3-209ENST00000564037 FBXO41Q8TF61 875 aa13.48□□□□□ -0.25
GBP3-209ENST00000564037 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
GBP3-209ENST00000564037 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
GBP3-209ENST00000564037 HRCP23327 699 aa13.37□□□□□ -0.27
GBP3-209ENST00000564037 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
GBP3-209ENST00000564037 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
GBP3-209ENST00000564037 ILDR2Q71H61 639 aa13.3□□□□□ -0.28
GBP3-209ENST00000564037 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
GBP3-209ENST00000564037 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
GBP3-209ENST00000564037 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
GBP3-209ENST00000564037 TRIM26Q12899 539 aaPredicted RBP13.26□□□□□ -0.29
GBP3-209ENST00000564037 WIZO95785 1651 aa13.25□□□□□ -0.29
GBP3-209ENST00000564037 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
GBP3-209ENST00000564037 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
GBP3-209ENST00000564037 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
GBP3-209ENST00000564037 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
GBP3-209ENST00000564037 MSH5O43196 834 aa13.2□□□□□ -0.3
GBP3-209ENST00000564037 DISP3Q9P2K9 1392 aa13.19□□□□□ -0.3
GBP3-209ENST00000564037 CHD1O14646 1710 aa13.18□□□□□ -0.3
GBP3-209ENST00000564037 EEA1Q15075 1411 aa13.14□□□□□ -0.31
GBP3-209ENST00000564037 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
GBP3-209ENST00000564037 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
GBP3-209ENST00000564037 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
GBP3-209ENST00000564037 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
GBP3-209ENST00000564037 FBLN2P98095 1184 aa13.08□□□□□ -0.32
GBP3-209ENST00000564037 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.32
GBP3-209ENST00000564037 SYNJ2O15056 1496 aa13.06□□□□□ -0.32
GBP3-209ENST00000564037 IFT140Q96RY7 1462 aa13.05□□□□□ -0.32
GBP3-209ENST00000564037 KIF13AQ9H1H9 1805 aa13.03□□□□□ -0.32
GBP3-209ENST00000564037 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
GBP3-209ENST00000564037 CCDC88BA6NC98 1476 aa13□□□□□ -0.33
GBP3-209ENST00000564037 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
GBP3-209ENST00000564037 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
GBP3-209ENST00000564037 ADGRL1O94910 1474 aa12.97□□□□□ -0.33
GBP3-209ENST00000564037 KDM6BO15054 1643 aa12.95□□□□□ -0.34
GBP3-209ENST00000564037 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
GBP3-209ENST00000564037 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
GBP3-209ENST00000564037 SYNJ1O43426 1573 aa12.9□□□□□ -0.35
GBP3-209ENST00000564037 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.35
GBP3-209ENST00000564037 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
GBP3-209ENST00000564037 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
GBP3-209ENST00000564037 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
GBP3-209ENST00000564037 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
GBP3-209ENST00000564037 KIF21BO75037 1637 aa12.85□□□□□ -0.35
GBP3-209ENST00000564037 CFTRP13569 1480 aa12.84□□□□□ -0.35
GBP3-209ENST00000564037 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
GBP3-209ENST00000564037 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms