RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 NISCHQ9Y2I1 1504 aa38.15■■■■□ 3.7
BBS4-204ENST00000562084 CCDC180Q9P1Z9 1646 aa33.68■■■□□ 2.98
BBS4-204ENST00000562084 ABCC9O60706 1549 aa32.53■■■□□ 2.8
BBS4-204ENST00000562084 ZCCHC6Q5VYS8 1495 aaKnown RBP31.87■■■□□ 2.69
BBS4-204ENST00000562084 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
BBS4-204ENST00000562084 DCAF1Q9Y4B6 1507 aa31.55■■■□□ 2.64
BBS4-204ENST00000562084 NACADO15069 1562 aa31.54■■■□□ 2.64
BBS4-204ENST00000562084 MYO15BQ96JP2 1530 aa31.48■■■□□ 2.63
BBS4-204ENST00000562084 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
BBS4-204ENST00000562084 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
BBS4-204ENST00000562084 HRCP23327 699 aa31.18■■■□□ 2.58
BBS4-204ENST00000562084 SUPT5HO00267 1087 aaKnown RBP31.1■■■□□ 2.57
BBS4-204ENST00000562084 UNC13AQ9UPW8 1703 aa30.85■■■□□ 2.53
BBS4-204ENST00000562084 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
BBS4-204ENST00000562084 CHIC1Q5VXU3 224 aa30.78■■■□□ 2.52
BBS4-204ENST00000562084 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
BBS4-204ENST00000562084 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
BBS4-204ENST00000562084 PCGF6Q9BYE7 350 aa30.44■■■□□ 2.46
BBS4-204ENST00000562084 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
BBS4-204ENST00000562084 TRIM26Q12899 539 aaPredicted RBP29.94■■■□□ 2.38
BBS4-204ENST00000562084 PELP1Q8IZL8 1130 aaKnown RBP29.86■■■□□ 2.37
BBS4-204ENST00000562084 ZEB1P37275 1124 aaPredicted RBP29.82■■■□□ 2.36
BBS4-204ENST00000562084 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
BBS4-204ENST00000562084 LOC105371045A0A1W2PR82 267 aa29.69■■■□□ 2.34
BBS4-204ENST00000562084 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
BBS4-204ENST00000562084 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
BBS4-204ENST00000562084 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
BBS4-204ENST00000562084 DNAJC5BQ9UF47 199 aa29.45■■■□□ 2.31
BBS4-204ENST00000562084 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
BBS4-204ENST00000562084 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
BBS4-204ENST00000562084 RSF1Q96T23 1441 aaPredicted RBP29.27■■■□□ 2.28
BBS4-204ENST00000562084 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
BBS4-204ENST00000562084 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
BBS4-204ENST00000562084 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
BBS4-204ENST00000562084 WIZO95785 1651 aa29.17■■■□□ 2.26
BBS4-204ENST00000562084 NCAPD3P42695 1498 aa29.11■■■□□ 2.25
BBS4-204ENST00000562084 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
BBS4-204ENST00000562084 SCAF1Q9H7N4 1312 aaKnown RBP29.06■■■□□ 2.24
BBS4-204ENST00000562084 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
BBS4-204ENST00000562084 BAZ1BQ9UIG0 1483 aaKnown RBP28.99■■■□□ 2.23
BBS4-204ENST00000562084 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
BBS4-204ENST00000562084 MYT1Q01538 1121 aa28.74■■■□□ 2.19
BBS4-204ENST00000562084 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
BBS4-204ENST00000562084 FAM9AQ8IZU1 332 aaPredicted RBP28.63■■■□□ 2.17
BBS4-204ENST00000562084 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
BBS4-204ENST00000562084 CENPBP07199 599 aaPredicted RBP28.51■■■□□ 2.15
BBS4-204ENST00000562084 CCER1Q8TC90 406 aaPredicted RBP28.45■■■□□ 2.15
BBS4-204ENST00000562084 NEUROD1Q13562 356 aa28.41■■■□□ 2.14
BBS4-204ENST00000562084 WRNQ14191 1432 aaPredicted RBP eCLIP28.39■■■□□ 2.14
BBS4-204ENST00000562084 DIEXFQ68CQ4 756 aaKnown RBP28.35■■■□□ 2.13
BBS4-204ENST00000562084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.34■■■□□ 2.13
BBS4-204ENST00000562084 NESP48681 1621 aa28.31■■■□□ 2.12
BBS4-204ENST00000562084 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
BBS4-204ENST00000562084 LAMC3Q9Y6N6 1575 aa28.26■■■□□ 2.11
BBS4-204ENST00000562084 GTF3C3Q9Y5Q9 886 aa28.24■■■□□ 2.11
BBS4-204ENST00000562084 CFTRP13569 1480 aa28.23■■■□□ 2.11
BBS4-204ENST00000562084 EHMT2Q96KQ7 1210 aa28.18■■■□□ 2.1
BBS4-204ENST00000562084 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
BBS4-204ENST00000562084 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
BBS4-204ENST00000562084 TNIKQ9UKE5 1360 aa28.04■■■□□ 2.08
BBS4-204ENST00000562084 EEA1Q15075 1411 aa28.04■■■□□ 2.08
BBS4-204ENST00000562084 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
BBS4-204ENST00000562084 ZNF316A6NFI3 1004 aaPredicted RBP28.01■■■□□ 2.07
BBS4-204ENST00000562084 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
BBS4-204ENST00000562084 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
BBS4-204ENST00000562084 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
BBS4-204ENST00000562084 CEP164Q9UPV0 1460 aa27.87■■■□□ 2.05
BBS4-204ENST00000562084 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
BBS4-204ENST00000562084 GOLGA3Q08378 1498 aa27.75■■■□□ 2.03
BBS4-204ENST00000562084 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
BBS4-204ENST00000562084 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
BBS4-204ENST00000562084 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.03
BBS4-204ENST00000562084 SOGA1O94964 1423 aa27.7■■■□□ 2.02
BBS4-204ENST00000562084 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
BBS4-204ENST00000562084 CLSPNQ9HAW4 1339 aa27.65■■■□□ 2.02
BBS4-204ENST00000562084 WDR62O43379 1518 aa27.62■■■□□ 2.01
BBS4-204ENST00000562084 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
BBS4-204ENST00000562084 CUX1P39880 1505 aa27.58■■■□□ 2.01
BBS4-204ENST00000562084 DNMBPQ6XZF7 1577 aa27.58■■■□□ 2.01
BBS4-204ENST00000562084 KIF21BO75037 1637 aa27.56■■■□□ 2
BBS4-204ENST00000562084 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
BBS4-204ENST00000562084 MIER1Q8N108 512 aa27.55■■■□□ 2
BBS4-204ENST00000562084 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
BBS4-204ENST00000562084 SYNJ1O43426 1573 aa27.51■■□□□ 1.99
BBS4-204ENST00000562084 YTHDC1Q96MU7 727 aaKnown RBP27.5■■□□□ 1.99
BBS4-204ENST00000562084 RUSC2Q8N2Y8 1516 aa27.47■■□□□ 1.99
BBS4-204ENST00000562084 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
BBS4-204ENST00000562084 CUX2O14529 1486 aa27.46■■□□□ 1.99
BBS4-204ENST00000562084 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
BBS4-204ENST00000562084 VPS8Q8N3P4 1428 aa27.42■■□□□ 1.98
BBS4-204ENST00000562084 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
BBS4-204ENST00000562084 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.97
BBS4-204ENST00000562084 CLIP1P30622 1438 aa27.37■■□□□ 1.97
BBS4-204ENST00000562084 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
BBS4-204ENST00000562084 RAD54L2Q9Y4B4 1467 aa27.29■■□□□ 1.96
BBS4-204ENST00000562084 TARBP1Q13395 1621 aaKnown RBP27.26■■□□□ 1.96
BBS4-204ENST00000562084 IFT140Q96RY7 1462 aa27.26■■□□□ 1.95
BBS4-204ENST00000562084 APLP2Q06481 763 aa27.24■■□□□ 1.95
BBS4-204ENST00000562084 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
BBS4-204ENST00000562084 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms