RNA–Protein interactions for RNA: ENST00000561542.1

AL353796.1-201, humanhuman

BASIC

Gene AL353796.1, Length 3,241 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353796.1-201ENST00000561542 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
AL353796.1-201ENST00000561542 CCDC180Q9P1Z9 1646 aa10.82□□□□□ -0.68
AL353796.1-201ENST00000561542 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
AL353796.1-201ENST00000561542 ABCC9O60706 1549 aa10.69□□□□□ -0.7
AL353796.1-201ENST00000561542 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
AL353796.1-201ENST00000561542 ZCCHC6Q5VYS8 1495 aaKnown RBP10.44□□□□□ -0.74
AL353796.1-201ENST00000561542 SLC24A1O60721 1099 aa10.39□□□□□ -0.75
AL353796.1-201ENST00000561542 DCAF1Q9Y4B6 1507 aa10.24□□□□□ -0.77
AL353796.1-201ENST00000561542 SCRIBQ14160 1630 aa10.23□□□□□ -0.77
AL353796.1-201ENST00000561542 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
AL353796.1-201ENST00000561542 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
AL353796.1-201ENST00000561542 AEBP2Q6ZN18 517 aaPredicted RBP10.12□□□□□ -0.79
AL353796.1-201ENST00000561542 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
AL353796.1-201ENST00000561542 NACADO15069 1562 aa10.1□□□□□ -0.79
AL353796.1-201ENST00000561542 UNC13AQ9UPW8 1703 aa10.1□□□□□ -0.79
AL353796.1-201ENST00000561542 SUPT5HO00267 1087 aaKnown RBP9.96□□□□□ -0.81
AL353796.1-201ENST00000561542 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
AL353796.1-201ENST00000561542 CECR2Q9BXF3 1484 aa9.88□□□□□ -0.83
AL353796.1-201ENST00000561542 MYT1Q01538 1121 aa9.85□□□□□ -0.83
AL353796.1-201ENST00000561542 CHIC1Q5VXU3 224 aa9.84□□□□□ -0.83
AL353796.1-201ENST00000561542 MROH2BQ7Z745 1585 aa9.75□□□□□ -0.85
AL353796.1-201ENST00000561542 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
AL353796.1-201ENST00000561542 TTBK1Q5TCY1 1321 aaPredicted RBP9.74□□□□□ -0.85
AL353796.1-201ENST00000561542 WIZO95785 1651 aa9.71□□□□□ -0.85
AL353796.1-201ENST00000561542 RSF1Q96T23 1441 aaPredicted RBP9.69□□□□□ -0.86
AL353796.1-201ENST00000561542 SMARCA4P51532 1647 aa9.65□□□□□ -0.86
AL353796.1-201ENST00000561542 DNAJC5BQ9UF47 199 aa9.64□□□□□ -0.87
AL353796.1-201ENST00000561542 DAXXQ9UER7 740 aaPredicted RBP9.63□□□□□ -0.87
AL353796.1-201ENST00000561542 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
AL353796.1-201ENST00000561542 BAZ1AQ9NRL2 1556 aaPredicted RBP9.6□□□□□ -0.87
AL353796.1-201ENST00000561542 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
AL353796.1-201ENST00000561542 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
AL353796.1-201ENST00000561542 APLP2Q06481 763 aa9.52□□□□□ -0.89
AL353796.1-201ENST00000561542 ATAD2BQ9ULI0 1458 aa9.51□□□□□ -0.89
AL353796.1-201ENST00000561542 BAZ1BQ9UIG0 1483 aaKnown RBP9.48□□□□□ -0.89
AL353796.1-201ENST00000561542 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
AL353796.1-201ENST00000561542 TOP2AP11388 1531 aaKnown RBP9.43□□□□□ -0.9
AL353796.1-201ENST00000561542 CCDC88BA6NC98 1476 aa9.42□□□□□ -0.9
AL353796.1-201ENST00000561542 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
AL353796.1-201ENST00000561542 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
AL353796.1-201ENST00000561542 NESP48681 1621 aa9.36□□□□□ -0.91
AL353796.1-201ENST00000561542 NCAPD3P42695 1498 aa9.36□□□□□ -0.91
AL353796.1-201ENST00000561542 EHMT2Q96KQ7 1210 aa9.35□□□□□ -0.91
AL353796.1-201ENST00000561542 ABCC8Q09428 1581 aa9.34□□□□□ -0.91
AL353796.1-201ENST00000561542 HMGXB3Q12766 1538 aa9.32□□□□□ -0.92
AL353796.1-201ENST00000561542 FAM9AQ8IZU1 332 aaPredicted RBP9.28□□□□□ -0.92
AL353796.1-201ENST00000561542 NCBP3Q53F19 620 aaKnown RBP9.24□□□□□ -0.93
AL353796.1-201ENST00000561542 TRIM41Q8WV44 630 aa9.21□□□□□ -0.93
AL353796.1-201ENST00000561542 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
AL353796.1-201ENST00000561542 CADPSQ9ULU8 1353 aa9.18□□□□□ -0.94
AL353796.1-201ENST00000561542 SYNJ1O43426 1573 aa9.16□□□□□ -0.94
AL353796.1-201ENST00000561542 CFTRP13569 1480 aa9.16□□□□□ -0.94
AL353796.1-201ENST00000561542 PLPPR3Q6T4P5 718 aa9.16□□□□□ -0.94
AL353796.1-201ENST00000561542 FANCD2Q9BXW9 1451 aa9.13□□□□□ -0.95
AL353796.1-201ENST00000561542 RTN4Q9NQC3 1192 aaKnown RBP9.12□□□□□ -0.95
AL353796.1-201ENST00000561542 LOC105371045A0A1W2PR82 267 aa9.12□□□□□ -0.95
AL353796.1-201ENST00000561542 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
AL353796.1-201ENST00000561542 RUSC2Q8N2Y8 1516 aa9.11□□□□□ -0.95
AL353796.1-201ENST00000561542 CUX1P39880 1505 aa9.1□□□□□ -0.95
AL353796.1-201ENST00000561542 PRDM2Q13029 1718 aa9.1□□□□□ -0.95
AL353796.1-201ENST00000561542 ERCC6Q03468 1493 aa9.1□□□□□ -0.95
AL353796.1-201ENST00000561542 SOGA1O94964 1423 aa9.09□□□□□ -0.95
AL353796.1-201ENST00000561542 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
AL353796.1-201ENST00000561542 CEP164Q9UPV0 1460 aa9.07□□□□□ -0.96
AL353796.1-201ENST00000561542 URB2Q14146 1524 aaKnown RBP9.06□□□□□ -0.96
AL353796.1-201ENST00000561542 RAD54L2Q9Y4B4 1467 aa9.06□□□□□ -0.96
AL353796.1-201ENST00000561542 RANGAP1P46060 587 aaPredicted RBP9.05□□□□□ -0.96
AL353796.1-201ENST00000561542 FGD5Q6ZNL6 1462 aa9.03□□□□□ -0.96
AL353796.1-201ENST00000561542 PDS5BQ9NTI5 1447 aa9.02□□□□□ -0.96
AL353796.1-201ENST00000561542 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
AL353796.1-201ENST00000561542 TOP2BQ02880 1626 aa9.01□□□□□ -0.97
AL353796.1-201ENST00000561542 POLA1P09884 1462 aaPredicted RBP8.99□□□□□ -0.97
AL353796.1-201ENST00000561542 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
AL353796.1-201ENST00000561542 BIVM-ERCC5R4GMW8 1640 aa8.98□□□□□ -0.97
AL353796.1-201ENST00000561542 THOC2Q8NI27 1593 aaKnown RBP8.96□□□□□ -0.97
AL353796.1-201ENST00000561542 DNMBPQ6XZF7 1577 aa8.96□□□□□ -0.97
AL353796.1-201ENST00000561542 CUX2O14529 1486 aa8.96□□□□□ -0.98
AL353796.1-201ENST00000561542 ARXQ96QS3 562 aa8.95□□□□□ -0.98
AL353796.1-201ENST00000561542 ZNF608Q9ULD9 1512 aaPredicted RBP8.95□□□□□ -0.98
AL353796.1-201ENST00000561542 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
AL353796.1-201ENST00000561542 EIF5BO60841 1220 aaKnown RBP8.94□□□□□ -0.98
AL353796.1-201ENST00000561542 AQRO60306 1485 aaKnown RBP eCLIP8.94□□□□□ -0.98
AL353796.1-201ENST00000561542 WDR62O43379 1518 aa8.89□□□□□ -0.99
AL353796.1-201ENST00000561542 UBTFP17480 764 aaKnown RBP8.89□□□□□ -0.99
AL353796.1-201ENST00000561542 FBLN2P98095 1184 aa8.89□□□□□ -0.99
AL353796.1-201ENST00000561542 CSRNP3Q8WYN3 585 aa8.88□□□□□ -0.99
AL353796.1-201ENST00000561542 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
AL353796.1-201ENST00000561542 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
AL353796.1-201ENST00000561542 PPARGC1BQ86YN6 1023 aaKnown RBP8.87□□□□□ -0.99
AL353796.1-201ENST00000561542 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
AL353796.1-201ENST00000561542 EIF4G3O43432 1585 aaKnown RBP8.85□□□□□ -0.99
AL353796.1-201ENST00000561542 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
AL353796.1-201ENST00000561542 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
AL353796.1-201ENST00000561542 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
AL353796.1-201ENST00000561542 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
AL353796.1-201ENST00000561542 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
AL353796.1-201ENST00000561542 PBRM1Q86U86 1689 aa8.82□□□□□ -1
AL353796.1-201ENST00000561542 IGF1RP08069 1367 aa8.82□□□□□ -1
AL353796.1-201ENST00000561542 P3H3Q8IVL6 736 aa8.82□□□□□ -1
AL353796.1-201ENST00000561542 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms