RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
MARK3-225ENST00000561225 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
MARK3-225ENST00000561225 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
MARK3-225ENST00000561225 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
MARK3-225ENST00000561225 FOXD1Q16676 465 aa20.72■□□□□ 0.91
MARK3-225ENST00000561225 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
MARK3-225ENST00000561225 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
MARK3-225ENST00000561225 MSH5O43196 834 aa19.65■□□□□ 0.74
MARK3-225ENST00000561225 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
MARK3-225ENST00000561225 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
MARK3-225ENST00000561225 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
MARK3-225ENST00000561225 ADRA2BP18089 450 aa18.84■□□□□ 0.61
MARK3-225ENST00000561225 ABCC9O60706 1549 aa18.64■□□□□ 0.58
MARK3-225ENST00000561225 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
MARK3-225ENST00000561225 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
MARK3-225ENST00000561225 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
MARK3-225ENST00000561225 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
MARK3-225ENST00000561225 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
MARK3-225ENST00000561225 NACADO15069 1562 aa17.32■□□□□ 0.36
MARK3-225ENST00000561225 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
MARK3-225ENST00000561225 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
MARK3-225ENST00000561225 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
MARK3-225ENST00000561225 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
MARK3-225ENST00000561225 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
MARK3-225ENST00000561225 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
MARK3-225ENST00000561225 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.31
MARK3-225ENST00000561225 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
MARK3-225ENST00000561225 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
MARK3-225ENST00000561225 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
MARK3-225ENST00000561225 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
MARK3-225ENST00000561225 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
MARK3-225ENST00000561225 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
MARK3-225ENST00000561225 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
MARK3-225ENST00000561225 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
MARK3-225ENST00000561225 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
MARK3-225ENST00000561225 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
MARK3-225ENST00000561225 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
MARK3-225ENST00000561225 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
MARK3-225ENST00000561225 C1QBPQ07021 282 aaKnown RBP16.43■□□□□ 0.22
MARK3-225ENST00000561225 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
MARK3-225ENST00000561225 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
MARK3-225ENST00000561225 CUX2O14529 1486 aa16.24■□□□□ 0.19
MARK3-225ENST00000561225 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
MARK3-225ENST00000561225 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
MARK3-225ENST00000561225 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
MARK3-225ENST00000561225 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
MARK3-225ENST00000561225 NESP48681 1621 aa15.9■□□□□ 0.14
MARK3-225ENST00000561225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.87■□□□□ 0.136e-23■■■■■ 38.1
MARK3-225ENST00000561225 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
MARK3-225ENST00000561225 SMARCA2P51531 1590 aa15.82■□□□□ 0.12
MARK3-225ENST00000561225 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
MARK3-225ENST00000561225 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
MARK3-225ENST00000561225 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
MARK3-225ENST00000561225 BAZ1BQ9UIG0 1483 aaKnown RBP15.72■□□□□ 0.11
MARK3-225ENST00000561225 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
MARK3-225ENST00000561225 POTEHQ6S545 545 aa15.68■□□□□ 0.1
MARK3-225ENST00000561225 KIF21AQ7Z4S6 1674 aa15.64■□□□□ 0.09
MARK3-225ENST00000561225 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
MARK3-225ENST00000561225 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
MARK3-225ENST00000561225 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
MARK3-225ENST00000561225 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
MARK3-225ENST00000561225 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
MARK3-225ENST00000561225 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
MARK3-225ENST00000561225 WDR62O43379 1518 aa15.51■□□□□ 0.07
MARK3-225ENST00000561225 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
MARK3-225ENST00000561225 KCNA4P22459 653 aa15.48■□□□□ 0.07
MARK3-225ENST00000561225 DSG3P32926 999 aa15.43■□□□□ 0.06
MARK3-225ENST00000561225 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
MARK3-225ENST00000561225 CAPN15O75808 1086 aa15.42■□□□□ 0.06
MARK3-225ENST00000561225 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
MARK3-225ENST00000561225 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
MARK3-225ENST00000561225 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
MARK3-225ENST00000561225 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
MARK3-225ENST00000561225 WIZO95785 1651 aa15.26■□□□□ 0.03
MARK3-225ENST00000561225 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
MARK3-225ENST00000561225 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
MARK3-225ENST00000561225 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
MARK3-225ENST00000561225 CFTRP13569 1480 aa15.26■□□□□ 0.03
MARK3-225ENST00000561225 URB2Q14146 1524 aaKnown RBP15.24■□□□□ 0.03
MARK3-225ENST00000561225 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
MARK3-225ENST00000561225 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
MARK3-225ENST00000561225 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
MARK3-225ENST00000561225 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
MARK3-225ENST00000561225 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
MARK3-225ENST00000561225 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
MARK3-225ENST00000561225 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
MARK3-225ENST00000561225 ARAP1Q96P48 1450 aa15.02■□□□□ -0
MARK3-225ENST00000561225 ABCB7O75027 752 aa15□□□□□ -0.01
MARK3-225ENST00000561225 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
MARK3-225ENST00000561225 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
MARK3-225ENST00000561225 APLP2Q06481 763 aa14.99□□□□□ -0.01
MARK3-225ENST00000561225 ZNF219Q9P2Y4 722 aaPredicted RBP14.98□□□□□ -0.01
MARK3-225ENST00000561225 PRDM2Q13029 1718 aa14.97□□□□□ -0.01
MARK3-225ENST00000561225 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■■■□ 25.8
MARK3-225ENST00000561225 CHD1O14646 1710 aa14.93□□□□□ -0.02
MARK3-225ENST00000561225 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
MARK3-225ENST00000561225 SLC4A2P04920 1241 aa14.91□□□□□ -0.02
MARK3-225ENST00000561225 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
MARK3-225ENST00000561225 FBLN2P98095 1184 aa14.9□□□□□ -0.02
MARK3-225ENST00000561225 DNMBPQ6XZF7 1577 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms