RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 NISCHQ9Y2I1 1504 aa13.3□□□□□ -0.28
CDK12-204ENST00000559545 AEBP2Q6ZN18 517 aaPredicted RBP12.56□□□□□ -0.4
CDK12-204ENST00000559545 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.41
CDK12-204ENST00000559545 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
CDK12-204ENST00000559545 ABCC9O60706 1549 aa11.32□□□□□ -0.6
CDK12-204ENST00000559545 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
CDK12-204ENST00000559545 DCAF1Q9Y4B6 1507 aa11.14□□□□□ -0.63
CDK12-204ENST00000559545 NACADO15069 1562 aa11.11□□□□□ -0.63
CDK12-204ENST00000559545 ZCCHC6Q5VYS8 1495 aaKnown RBP11.07□□□□□ -0.64
CDK12-204ENST00000559545 RB1CC1Q8TDY2 1594 aa11.05□□□□□ -0.64
CDK12-204ENST00000559545 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
CDK12-204ENST00000559545 PHF23Q9BUL5 403 aaPredicted RBP10.9□□□□□ -0.66
CDK12-204ENST00000559545 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
CDK12-204ENST00000559545 UNC13AQ9UPW8 1703 aa10.87□□□□□ -0.67
CDK12-204ENST00000559545 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
CDK12-204ENST00000559545 SENP3Q9H4L4 574 aaPredicted RBP10.81□□□□□ -0.68
CDK12-204ENST00000559545 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.69
CDK12-204ENST00000559545 SHROOM4Q9ULL8 1493 aa10.74□□□□□ -0.69
CDK12-204ENST00000559545 SCRIBQ14160 1630 aa10.59□□□□□ -0.71
CDK12-204ENST00000559545 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDK12-204ENST00000559545 PLPPR3Q6T4P5 718 aa10.48□□□□□ -0.73
CDK12-204ENST00000559545 DNAJC5BQ9UF47 199 aa10.47□□□□□ -0.73
CDK12-204ENST00000559545 EIF4G1Q04637 1599 aaKnown RBP10.42□□□□□ -0.74
CDK12-204ENST00000559545 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
CDK12-204ENST00000559545 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
CDK12-204ENST00000559545 NCAPD3P42695 1498 aa10.29□□□□□ -0.76
CDK12-204ENST00000559545 CECR2Q9BXF3 1484 aa10.29□□□□□ -0.76
CDK12-204ENST00000559545 BAZ1AQ9NRL2 1556 aaPredicted RBP10.28□□□□□ -0.76
CDK12-204ENST00000559545 SMARCA4P51532 1647 aa10.27□□□□□ -0.77
CDK12-204ENST00000559545 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
CDK12-204ENST00000559545 KCNA4P22459 653 aa10.25□□□□□ -0.77
CDK12-204ENST00000559545 CSRNP3Q8WYN3 585 aa10.23□□□□□ -0.77
CDK12-204ENST00000559545 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
CDK12-204ENST00000559545 SMARCA2P51531 1590 aa10.21□□□□□ -0.78
CDK12-204ENST00000559545 RTN4Q9NQC3 1192 aaKnown RBP10.2□□□□□ -0.78
CDK12-204ENST00000559545 MROH2BQ7Z745 1585 aa10.19□□□□□ -0.78
CDK12-204ENST00000559545 HMGXB3Q12766 1538 aa10.19□□□□□ -0.78
CDK12-204ENST00000559545 RSF1Q96T23 1441 aaPredicted RBP10.13□□□□□ -0.79
CDK12-204ENST00000559545 WIZO95785 1651 aa10.07□□□□□ -0.8
CDK12-204ENST00000559545 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
CDK12-204ENST00000559545 SLC4A1APQ9BWU0 796 aaKnown RBP10.01□□□□□ -0.81
CDK12-204ENST00000559545 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
CDK12-204ENST00000559545 NCBP3Q53F19 620 aaKnown RBP9.96□□□□□ -0.82
CDK12-204ENST00000559545 LAMC3Q9Y6N6 1575 aa9.96□□□□□ -0.82
CDK12-204ENST00000559545 CADPSQ9ULU8 1353 aa9.93□□□□□ -0.82
CDK12-204ENST00000559545 CFTRP13569 1480 aa9.91□□□□□ -0.82
CDK12-204ENST00000559545 CCDC88BA6NC98 1476 aa9.88□□□□□ -0.83
CDK12-204ENST00000559545 FOXD1Q16676 465 aa9.88□□□□□ -0.83
CDK12-204ENST00000559545 NESP48681 1621 aa9.85□□□□□ -0.83
CDK12-204ENST00000559545 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
CDK12-204ENST00000559545 PDS5BQ9NTI5 1447 aa9.85□□□□□ -0.83
CDK12-204ENST00000559545 CUX2O14529 1486 aa9.78□□□□□ -0.84
CDK12-204ENST00000559545 KIF21AQ7Z4S6 1674 aa9.77□□□□□ -0.84
CDK12-204ENST00000559545 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
CDK12-204ENST00000559545 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
CDK12-204ENST00000559545 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
CDK12-204ENST00000559545 WDR62O43379 1518 aa9.72□□□□□ -0.85
CDK12-204ENST00000559545 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
CDK12-204ENST00000559545 ABCC8Q09428 1581 aa9.71□□□□□ -0.85
CDK12-204ENST00000559545 MRC2Q9UBG0 1479 aa9.7□□□□□ -0.86
CDK12-204ENST00000559545 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
CDK12-204ENST00000559545 SUPT5HO00267 1087 aaKnown RBP9.69□□□□□ -0.86
CDK12-204ENST00000559545 ADRA2BP18089 450 aa9.68□□□□□ -0.86
CDK12-204ENST00000559545 URB2Q14146 1524 aaKnown RBP9.66□□□□□ -0.86
CDK12-204ENST00000559545 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
CDK12-204ENST00000559545 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
CDK12-204ENST00000559545 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
CDK12-204ENST00000559545 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
CDK12-204ENST00000559545 WDR97A6NE52 1622 aa9.56□□□□□ -0.88
CDK12-204ENST00000559545 CUX1P39880 1505 aa9.55□□□□□ -0.88
CDK12-204ENST00000559545 BIVM-ERCC5R4GMW8 1640 aa9.54□□□□□ -0.88
CDK12-204ENST00000559545 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
CDK12-204ENST00000559545 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
CDK12-204ENST00000559545 PPP6R1Q9UPN7 881 aa9.52□□□□□ -0.89
CDK12-204ENST00000559545 BCANQ96GW7 911 aa9.51□□□□□ -0.89
CDK12-204ENST00000559545 PRKCSHP14314 528 aaPredicted RBP9.5□□□□□ -0.89
CDK12-204ENST00000559545 SOGA1O94964 1423 aa9.49□□□□□ -0.89
CDK12-204ENST00000559545 WRNQ14191 1432 aaPredicted RBP eCLIP9.49□□□□□ -0.89
CDK12-204ENST00000559545 ABCA10Q8WWZ4 1543 aa9.48□□□□□ -0.89
CDK12-204ENST00000559545 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
CDK12-204ENST00000559545 ARXQ96QS3 562 aa9.46□□□□□ -0.9
CDK12-204ENST00000559545 SYNJ1O43426 1573 aa9.46□□□□□ -0.9
CDK12-204ENST00000559545 DNAJC5Q9H3Z4 198 aa9.45□□□□□ -0.9
CDK12-204ENST00000559545 ZNF608Q9ULD9 1512 aaPredicted RBP9.45□□□□□ -0.9
CDK12-204ENST00000559545 RAD54L2Q9Y4B4 1467 aa9.43□□□□□ -0.9
CDK12-204ENST00000559545 TAOK2Q9UL54 1235 aa9.42□□□□□ -0.9
CDK12-204ENST00000559545 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
CDK12-204ENST00000559545 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
CDK12-204ENST00000559545 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.9
CDK12-204ENST00000559545 PIAS4Q8N2W9 510 aaPredicted RBP9.4□□□□□ -0.9
CDK12-204ENST00000559545 ZBTB22O15209 634 aa9.39□□□□□ -0.91
CDK12-204ENST00000559545 GRIN2BQ13224 1484 aa9.38□□□□□ -0.91
CDK12-204ENST00000559545 GAPVD1Q14C86 1478 aa9.38□□□□□ -0.91
CDK12-204ENST00000559545 MAGI1Q96QZ7 1491 aaPredicted RBP9.38□□□□□ -0.91
CDK12-204ENST00000559545 TDRD9Q8NDG6 1382 aaKnown RBP9.37□□□□□ -0.91
CDK12-204ENST00000559545 ERICH3Q5RHP9 1530 aa9.37□□□□□ -0.91
CDK12-204ENST00000559545 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
CDK12-204ENST00000559545 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
CDK12-204ENST00000559545 PPP4R3CPQ6ZMV5 832 aa9.35□□□□□ -0.91
CDK12-204ENST00000559545 PBRM1Q86U86 1689 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms