RNA–Protein interactions for RNA: ENST00000558770.5

HAPLN3-202, Transcript of hyaluronan and proteoglycan link protein 3, humanhuman

TSL 2

Gene HAPLN3, Length 3,071 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3-202ENST00000558770 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
HAPLN3-202ENST00000558770 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
HAPLN3-202ENST00000558770 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
HAPLN3-202ENST00000558770 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
HAPLN3-202ENST00000558770 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
HAPLN3-202ENST00000558770 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
HAPLN3-202ENST00000558770 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
HAPLN3-202ENST00000558770 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
HAPLN3-202ENST00000558770 HRCP23327 699 aa20.51■□□□□ 0.87
HAPLN3-202ENST00000558770 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
HAPLN3-202ENST00000558770 ABCC9O60706 1549 aa20.49■□□□□ 0.87
HAPLN3-202ENST00000558770 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
HAPLN3-202ENST00000558770 NACADO15069 1562 aa20.35■□□□□ 0.85
HAPLN3-202ENST00000558770 PPARGC1BQ86YN6 1023 aaKnown RBP20.32■□□□□ 0.84
HAPLN3-202ENST00000558770 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
HAPLN3-202ENST00000558770 PCGF6Q9BYE7 350 aa20.18■□□□□ 0.82
HAPLN3-202ENST00000558770 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
HAPLN3-202ENST00000558770 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
HAPLN3-202ENST00000558770 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
HAPLN3-202ENST00000558770 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
HAPLN3-202ENST00000558770 WIZO95785 1651 aa19.83■□□□□ 0.77
HAPLN3-202ENST00000558770 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
HAPLN3-202ENST00000558770 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
HAPLN3-202ENST00000558770 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
HAPLN3-202ENST00000558770 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
HAPLN3-202ENST00000558770 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
HAPLN3-202ENST00000558770 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
HAPLN3-202ENST00000558770 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
HAPLN3-202ENST00000558770 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
HAPLN3-202ENST00000558770 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.73
HAPLN3-202ENST00000558770 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
HAPLN3-202ENST00000558770 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.71
HAPLN3-202ENST00000558770 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
HAPLN3-202ENST00000558770 CCDC88BA6NC98 1476 aa19.42■□□□□ 0.7
HAPLN3-202ENST00000558770 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
HAPLN3-202ENST00000558770 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
HAPLN3-202ENST00000558770 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
HAPLN3-202ENST00000558770 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
HAPLN3-202ENST00000558770 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
HAPLN3-202ENST00000558770 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.65
HAPLN3-202ENST00000558770 MYT1Q01538 1121 aa19.06■□□□□ 0.64
HAPLN3-202ENST00000558770 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
HAPLN3-202ENST00000558770 SOGA1O94964 1423 aa19.05■□□□□ 0.64
HAPLN3-202ENST00000558770 NEUROD1Q13562 356 aa19.02■□□□□ 0.64
HAPLN3-202ENST00000558770 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
HAPLN3-202ENST00000558770 RUSC2Q8N2Y8 1516 aa18.98■□□□□ 0.63
HAPLN3-202ENST00000558770 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
HAPLN3-202ENST00000558770 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
HAPLN3-202ENST00000558770 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
HAPLN3-202ENST00000558770 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
HAPLN3-202ENST00000558770 EEA1Q15075 1411 aa18.87■□□□□ 0.61
HAPLN3-202ENST00000558770 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
HAPLN3-202ENST00000558770 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
HAPLN3-202ENST00000558770 HMGXB3Q12766 1538 aa18.83■□□□□ 0.61
HAPLN3-202ENST00000558770 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
HAPLN3-202ENST00000558770 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
HAPLN3-202ENST00000558770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
HAPLN3-202ENST00000558770 GOLGA3Q08378 1498 aa18.73■□□□□ 0.59
HAPLN3-202ENST00000558770 UBTFP17480 764 aaKnown RBP18.73■□□□□ 0.59
HAPLN3-202ENST00000558770 TOP2BQ02880 1626 aa18.72■□□□□ 0.59
HAPLN3-202ENST00000558770 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
HAPLN3-202ENST00000558770 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
HAPLN3-202ENST00000558770 KIF21BO75037 1637 aa18.68■□□□□ 0.58
HAPLN3-202ENST00000558770 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
HAPLN3-202ENST00000558770 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
HAPLN3-202ENST00000558770 CFTRP13569 1480 aa18.63■□□□□ 0.57
HAPLN3-202ENST00000558770 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
HAPLN3-202ENST00000558770 RANGAP1P46060 587 aaPredicted RBP18.62■□□□□ 0.57
HAPLN3-202ENST00000558770 CUX1P39880 1505 aa18.6■□□□□ 0.57
HAPLN3-202ENST00000558770 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
HAPLN3-202ENST00000558770 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
HAPLN3-202ENST00000558770 CLIP1P30622 1438 aa18.5■□□□□ 0.55
HAPLN3-202ENST00000558770 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
HAPLN3-202ENST00000558770 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
HAPLN3-202ENST00000558770 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
HAPLN3-202ENST00000558770 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
HAPLN3-202ENST00000558770 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
HAPLN3-202ENST00000558770 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
HAPLN3-202ENST00000558770 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
HAPLN3-202ENST00000558770 APLP2Q06481 763 aa18.32■□□□□ 0.52
HAPLN3-202ENST00000558770 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
HAPLN3-202ENST00000558770 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
HAPLN3-202ENST00000558770 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
HAPLN3-202ENST00000558770 CUX2O14529 1486 aa18.27■□□□□ 0.52
HAPLN3-202ENST00000558770 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
HAPLN3-202ENST00000558770 IGF1RP08069 1367 aa18.25■□□□□ 0.51
HAPLN3-202ENST00000558770 NESP48681 1621 aa18.22■□□□□ 0.51
HAPLN3-202ENST00000558770 ARHGAP35Q9NRY4 1499 aa18.18■□□□□ 0.5
HAPLN3-202ENST00000558770 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
HAPLN3-202ENST00000558770 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
HAPLN3-202ENST00000558770 MIER1Q8N108 512 aa18.17■□□□□ 0.5
HAPLN3-202ENST00000558770 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
HAPLN3-202ENST00000558770 CARMIL1Q5VZK9 1371 aa18.13■□□□□ 0.49
HAPLN3-202ENST00000558770 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
HAPLN3-202ENST00000558770 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
HAPLN3-202ENST00000558770 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
HAPLN3-202ENST00000558770 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
HAPLN3-202ENST00000558770 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
HAPLN3-202ENST00000558770 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
HAPLN3-202ENST00000558770 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms