RNA–Protein interactions for RNA: ENST00000558396.1

EXD1-203, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 4

Gene EXD1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-203ENST00000558396 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
EXD1-203ENST00000558396 ABCC9O60706 1549 aa17.27■□□□□ 0.36
EXD1-203ENST00000558396 CCDC180Q9P1Z9 1646 aa17.04■□□□□ 0.32
EXD1-203ENST00000558396 ZCCHC6Q5VYS8 1495 aaKnown RBP16.51■□□□□ 0.23
EXD1-203ENST00000558396 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
EXD1-203ENST00000558396 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
EXD1-203ENST00000558396 SHROOM4Q9ULL8 1493 aa16.31■□□□□ 0.2
EXD1-203ENST00000558396 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
EXD1-203ENST00000558396 NACADO15069 1562 aa16.16■□□□□ 0.18
EXD1-203ENST00000558396 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
EXD1-203ENST00000558396 UNC13AQ9UPW8 1703 aa16.05■□□□□ 0.16
EXD1-203ENST00000558396 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
EXD1-203ENST00000558396 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
EXD1-203ENST00000558396 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
EXD1-203ENST00000558396 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
EXD1-203ENST00000558396 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
EXD1-203ENST00000558396 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
EXD1-203ENST00000558396 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
EXD1-203ENST00000558396 HRCP23327 699 aa15.51■□□□□ 0.07
EXD1-203ENST00000558396 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
EXD1-203ENST00000558396 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
EXD1-203ENST00000558396 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
EXD1-203ENST00000558396 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
EXD1-203ENST00000558396 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
EXD1-203ENST00000558396 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
EXD1-203ENST00000558396 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
EXD1-203ENST00000558396 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
EXD1-203ENST00000558396 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
EXD1-203ENST00000558396 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
EXD1-203ENST00000558396 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
EXD1-203ENST00000558396 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02□□□□□ -0.01
EXD1-203ENST00000558396 CUX2O14529 1486 aa15□□□□□ -0.01
EXD1-203ENST00000558396 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
EXD1-203ENST00000558396 WIZO95785 1651 aa14.93□□□□□ -0.02
EXD1-203ENST00000558396 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
EXD1-203ENST00000558396 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
EXD1-203ENST00000558396 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
EXD1-203ENST00000558396 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
EXD1-203ENST00000558396 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
EXD1-203ENST00000558396 FAM9AQ8IZU1 332 aaPredicted RBP14.8□□□□□ -0.04
EXD1-203ENST00000558396 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
EXD1-203ENST00000558396 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
EXD1-203ENST00000558396 NESP48681 1621 aa14.77□□□□□ -0.05
EXD1-203ENST00000558396 EEA1Q15075 1411 aa14.75□□□□□ -0.05
EXD1-203ENST00000558396 CCDC88BA6NC98 1476 aa14.7□□□□□ -0.06
EXD1-203ENST00000558396 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
EXD1-203ENST00000558396 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
EXD1-203ENST00000558396 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
EXD1-203ENST00000558396 LAMC3Q9Y6N6 1575 aa14.63□□□□□ -0.07
EXD1-203ENST00000558396 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
EXD1-203ENST00000558396 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
EXD1-203ENST00000558396 TNIKQ9UKE5 1360 aa14.61□□□□□ -0.07
EXD1-203ENST00000558396 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
EXD1-203ENST00000558396 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
EXD1-203ENST00000558396 PDS5BQ9NTI5 1447 aa14.52□□□□□ -0.08
EXD1-203ENST00000558396 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
EXD1-203ENST00000558396 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
EXD1-203ENST00000558396 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
EXD1-203ENST00000558396 SOGA1O94964 1423 aa14.47□□□□□ -0.09
EXD1-203ENST00000558396 CCER1Q8TC90 406 aaPredicted RBP14.45□□□□□ -0.1
EXD1-203ENST00000558396 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
EXD1-203ENST00000558396 KIF21BO75037 1637 aa14.44□□□□□ -0.1
EXD1-203ENST00000558396 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
EXD1-203ENST00000558396 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
EXD1-203ENST00000558396 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
EXD1-203ENST00000558396 WDR62O43379 1518 aa14.41□□□□□ -0.1
EXD1-203ENST00000558396 UBTFP17480 764 aaKnown RBP14.38□□□□□ -0.11
EXD1-203ENST00000558396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
EXD1-203ENST00000558396 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
EXD1-203ENST00000558396 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
EXD1-203ENST00000558396 CLIP1P30622 1438 aa14.28□□□□□ -0.12
EXD1-203ENST00000558396 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
EXD1-203ENST00000558396 VPS8Q8N3P4 1428 aa14.27□□□□□ -0.12
EXD1-203ENST00000558396 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
EXD1-203ENST00000558396 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
EXD1-203ENST00000558396 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
EXD1-203ENST00000558396 CENPBP07199 599 aaPredicted RBP14.23□□□□□ -0.13
EXD1-203ENST00000558396 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
EXD1-203ENST00000558396 DIEXFQ68CQ4 756 aaKnown RBP14.22□□□□□ -0.13
EXD1-203ENST00000558396 CFTRP13569 1480 aa14.21□□□□□ -0.13
EXD1-203ENST00000558396 APLP2Q06481 763 aa14.21□□□□□ -0.13
EXD1-203ENST00000558396 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
EXD1-203ENST00000558396 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
EXD1-203ENST00000558396 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
EXD1-203ENST00000558396 ZNF316A6NFI3 1004 aaPredicted RBP14.17□□□□□ -0.14
EXD1-203ENST00000558396 RAPGEF2Q9Y4G8 1499 aa14.16□□□□□ -0.14
EXD1-203ENST00000558396 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
EXD1-203ENST00000558396 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
EXD1-203ENST00000558396 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
EXD1-203ENST00000558396 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
EXD1-203ENST00000558396 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
EXD1-203ENST00000558396 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
EXD1-203ENST00000558396 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
EXD1-203ENST00000558396 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
EXD1-203ENST00000558396 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
EXD1-203ENST00000558396 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
EXD1-203ENST00000558396 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
EXD1-203ENST00000558396 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
EXD1-203ENST00000558396 CUX1P39880 1505 aa14.02□□□□□ -0.16
EXD1-203ENST00000558396 ARAP1Q96P48 1450 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms