RNA–Protein interactions for RNA: ENST00000556957.5

NFATC4-229, Transcript of nuclear factor of activated T cells 4, human

TSL 2

Gene NFATC4, Length 2,131 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFATC4-229	ENST00000556957	NISCH	Q9Y2I1	1504 aa		44.06	■■■■■ 4.64
NFATC4-229	ENST00000556957	CCDC180	Q9P1Z9	1646 aa		37.96	■■■■□ 3.67
NFATC4-229	ENST00000556957	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.32	■■■■□ 3.56
NFATC4-229	ENST00000556957	SHROOM4	Q9ULL8	1493 aa		37.3	■■■■□ 3.56
NFATC4-229	ENST00000556957	SUPT5H	O00267	1087 aa	Known RBP	36.67	■■■■□ 3.46
NFATC4-229	ENST00000556957	DCAF1	Q9Y4B6	1507 aa		36.31	■■■■□ 3.4
NFATC4-229	ENST00000556957	DCAF8L2	P0C7V8	631 aa		36.1	■■■■□ 3.37
NFATC4-229	ENST00000556957	CHIC1	Q5VXU3	224 aa		35.9	■■■■□ 3.34
NFATC4-229	ENST00000556957	MYO15B	Q96JP2	1530 aa		35.74	■■■■□ 3.31
NFATC4-229	ENST00000556957	ABCC9	O60706	1549 aa		35.24	■■■■□ 3.23
NFATC4-229	ENST00000556957	NACAD	O15069	1562 aa		35.13	■■■■□ 3.21
NFATC4-229	ENST00000556957	SCRIB	Q14160	1630 aa		35.05	■■■■□ 3.2
NFATC4-229	ENST00000556957	HRC	P23327	699 aa		35.02	■■■■□ 3.2
NFATC4-229	ENST00000556957	RSF1	Q96T23	1441 aa	Predicted RBP	34.87	■■■■□ 3.17
NFATC4-229	ENST00000556957	PCGF6	Q9BYE7	350 aa		34.76	■■■■□ 3.16
NFATC4-229	ENST00000556957	LOC105371045	A0A1W2PR82	267 aa		34.7	■■■■□ 3.15
NFATC4-229	ENST00000556957	RB1CC1	Q8TDY2	1594 aa		34.67	■■■■□ 3.14
NFATC4-229	ENST00000556957	TRIM41	Q8WV44	630 aa		34.27	■■■■□ 3.08
NFATC4-229	ENST00000556957	TRIM26	Q12899	539 aa	Predicted RBP	34.25	■■■■□ 3.07
NFATC4-229	ENST00000556957	CECR2	Q9BXF3	1484 aa		34.24	■■■■□ 3.07
NFATC4-229	ENST00000556957	UNC13A	Q9UPW8	1703 aa		34.19	■■■■□ 3.06
NFATC4-229	ENST00000556957	MROH2B	Q7Z745	1585 aa		34.18	■■■■□ 3.06
NFATC4-229	ENST00000556957	PPARGC1B	Q86YN6	1023 aa	Known RBP	34.06	■■■■□ 3.04
NFATC4-229	ENST00000556957	WIZ	O95785	1651 aa		33.99	■■■■□ 3.03
NFATC4-229	ENST00000556957	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	33.89	■■■■□ 3.02
NFATC4-229	ENST00000556957	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.81	■■■■□ 3
NFATC4-229	ENST00000556957	EIF4G1	Q04637	1599 aa	Known RBP	33.73	■■■□□ 2.99
NFATC4-229	ENST00000556957	BICRA	Q9NZM4	1560 aa		33.7	■■■□□ 2.99
NFATC4-229	ENST00000556957	ZEB1	P37275	1124 aa	Predicted RBP	33.64	■■■□□ 2.98
NFATC4-229	ENST00000556957	SMARCA4	P51532	1647 aa		33.62	■■■□□ 2.97
NFATC4-229	ENST00000556957	TOP2A	P11388	1531 aa	Known RBP	33.56	■■■□□ 2.96
NFATC4-229	ENST00000556957	EHMT2	Q96KQ7	1210 aa		33.36	■■■□□ 2.93
NFATC4-229	ENST00000556957	CCDC88B	A6NC98	1476 aa		33.36	■■■□□ 2.93
NFATC4-229	ENST00000556957	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
NFATC4-229	ENST00000556957	SMARCA2	P51531	1590 aa		33.35	■■■□□ 2.93
NFATC4-229	ENST00000556957	ABCC8	Q09428	1581 aa		33.21	■■■□□ 2.91
NFATC4-229	ENST00000556957	PEG3	Q9GZU2	1588 aa		33.15	■■■□□ 2.9
NFATC4-229	ENST00000556957	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.04	■■■□□ 2.88
NFATC4-229	ENST00000556957	EEA1	Q15075	1411 aa		33	■■■□□ 2.87
NFATC4-229	ENST00000556957	SOGA1	O94964	1423 aa		32.95	■■■□□ 2.86
NFATC4-229	ENST00000556957	TNIK	Q9UKE5	1360 aa		32.93	■■■□□ 2.86
NFATC4-229	ENST00000556957	CEP162	Q5TB80	1403 aa		32.9	■■■□□ 2.86
NFATC4-229	ENST00000556957	ATAD2B	Q9ULI0	1458 aa		32.84	■■■□□ 2.85
NFATC4-229	ENST00000556957	CSRNP3	Q8WYN3	585 aa		32.82	■■■□□ 2.84
NFATC4-229	ENST00000556957	RUSC2	Q8N2Y8	1516 aa		32.76	■■■□□ 2.84
NFATC4-229	ENST00000556957	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.69	■■■□□ 2.82
NFATC4-229	ENST00000556957	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.69	■■■□□ 2.82
NFATC4-229	ENST00000556957	GOLGA3	Q08378	1498 aa		32.68	■■■□□ 2.82
NFATC4-229	ENST00000556957	CCER1	Q8TC90	406 aa	Predicted RBP	32.65	■■■□□ 2.82
NFATC4-229	ENST00000556957	UBTF	P17480	764 aa	Known RBP	32.57	■■■□□ 2.8
NFATC4-229	ENST00000556957	SYNJ1	O43426	1573 aa		32.56	■■■□□ 2.8
NFATC4-229	ENST00000556957	KIF21B	O75037	1637 aa		32.52	■■■□□ 2.8
NFATC4-229	ENST00000556957	CEP164	Q9UPV0	1460 aa		32.5	■■■□□ 2.79
NFATC4-229	ENST00000556957	HMGXB3	Q12766	1538 aa		32.46	■■■□□ 2.79
NFATC4-229	ENST00000556957	NCAPD3	P42695	1498 aa		32.4	■■■□□ 2.78
NFATC4-229	ENST00000556957	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.36	■■■□□ 2.77
NFATC4-229	ENST00000556957	CLIP1	P30622	1438 aa		32.26	■■■□□ 2.75
NFATC4-229	ENST00000556957	SCAF1	Q9H7N4	1312 aa	Known RBP	32.25	■■■□□ 2.75
NFATC4-229	ENST00000556957	TOP2B	Q02880	1626 aa		32.23	■■■□□ 2.75
NFATC4-229	ENST00000556957	VPS8	Q8N3P4	1428 aa		32.19	■■■□□ 2.74
NFATC4-229	ENST00000556957	RAPGEF2	Q9Y4G8	1499 aa		32.17	■■■□□ 2.74
NFATC4-229	ENST00000556957	BIVM-ERCC5	R4GMW8	1640 aa		32.14	■■■□□ 2.74
NFATC4-229	ENST00000556957	DIEXF	Q68CQ4	756 aa	Known RBP	32.12	■■■□□ 2.73
NFATC4-229	ENST00000556957	ERICH3	Q5RHP9	1530 aa		31.99	■■■□□ 2.71
NFATC4-229	ENST00000556957	ACIN1	Q9UKV3	1341 aa	Known RBP	31.99	■■■□□ 2.71
NFATC4-229	ENST00000556957	PRX	Q9BXM0	1461 aa		31.95	■■■□□ 2.7
NFATC4-229	ENST00000556957	CC2D2A	Q9P2K1	1620 aa		31.94	■■■□□ 2.7
NFATC4-229	ENST00000556957	PRDM2	Q13029	1718 aa		31.93	■■■□□ 2.7
NFATC4-229	ENST00000556957	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.93	■■■□□ 2.7
NFATC4-229	ENST00000556957	APLP2	Q06481	763 aa		31.91	■■■□□ 2.7
NFATC4-229	ENST00000556957	CFTR	P13569	1480 aa		31.91	■■■□□ 2.7
NFATC4-229	ENST00000556957	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.88	■■■□□ 2.69
NFATC4-229	ENST00000556957	PELP1	Q8IZL8	1130 aa	Known RBP	31.88	■■■□□ 2.69
NFATC4-229	ENST00000556957	NEUROD1	Q13562	356 aa		31.85	■■■□□ 2.69
NFATC4-229	ENST00000556957	CUX1	P39880	1505 aa		31.83	■■■□□ 2.69
NFATC4-229	ENST00000556957	CENPB	P07199	599 aa	Predicted RBP	31.79	■■■□□ 2.68
NFATC4-229	ENST00000556957	ARAP1	Q96P48	1450 aa		31.77	■■■□□ 2.68
NFATC4-229	ENST00000556957	KIF27	Q86VH2	1401 aa		31.72	■■■□□ 2.67
NFATC4-229	ENST00000556957	RANGAP1	P46060	587 aa	Predicted RBP	31.68	■■■□□ 2.66
NFATC4-229	ENST00000556957	CADPS	Q9ULU8	1353 aa		31.62	■■■□□ 2.65
NFATC4-229	ENST00000556957	CLSPN	Q9HAW4	1339 aa		31.59	■■■□□ 2.65
NFATC4-229	ENST00000556957	GTF3C3	Q9Y5Q9	886 aa		31.52	■■■□□ 2.64
NFATC4-229	ENST00000556957	RRBP1	Q9P2E9	1410 aa	Known RBP	31.51	■■■□□ 2.63
NFATC4-229	ENST00000556957	KANK4	Q5T7N3	995 aa	Predicted RBP	31.51	■■■□□ 2.63
NFATC4-229	ENST00000556957	ARHGAP35	Q9NRY4	1499 aa		31.47	■■■□□ 2.63
NFATC4-229	ENST00000556957	DHX57	Q6P158	1386 aa	Known RBP	31.46	■■■□□ 2.63
NFATC4-229	ENST00000556957	MIER1	Q8N108	512 aa		31.4	■■■□□ 2.62
NFATC4-229	ENST00000556957	CUX2	O14529	1486 aa		31.39	■■■□□ 2.62
NFATC4-229	ENST00000556957	IGF1R	P08069	1367 aa		31.37	■■■□□ 2.61
NFATC4-229	ENST00000556957	FANCD2	Q9BXW9	1451 aa		31.31	■■■□□ 2.6
NFATC4-229	ENST00000556957	MAP3K1	Q13233	1512 aa		31.29	■■■□□ 2.6
NFATC4-229	ENST00000556957	CCNB3	Q8WWL7	1395 aa		31.29	■■■□□ 2.6
NFATC4-229	ENST00000556957	FGD5	Q6ZNL6	1462 aa		31.23	■■■□□ 2.59
NFATC4-229	ENST00000556957	LAMC3	Q9Y6N6	1575 aa		31.22	■■■□□ 2.59
NFATC4-229	ENST00000556957	CARMIL1	Q5VZK9	1371 aa		31.21	■■■□□ 2.59
NFATC4-229	ENST00000556957	NES	P48681	1621 aa		31.2	■■■□□ 2.59
NFATC4-229	ENST00000556957	DNMBP	Q6XZF7	1577 aa		31.19	■■■□□ 2.58
NFATC4-229	ENST00000556957	TIAM1	Q13009	1591 aa		31.18	■■■□□ 2.58
NFATC4-229	ENST00000556957	YTHDC1	Q96MU7	727 aa	Known RBP	31.18	■■■□□ 2.58
NFATC4-229	ENST00000556957	TOPBP1	Q92547	1522 aa		31.08	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms