RNA–Protein interactions for RNA: ENST00000556467.5

CASC1-211, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-211ENST00000556467 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
CASC1-211ENST00000556467 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
CASC1-211ENST00000556467 SENP3Q9H4L4 574 aaPredicted RBP18.37■□□□□ 0.53
CASC1-211ENST00000556467 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
CASC1-211ENST00000556467 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
CASC1-211ENST00000556467 FOXD1Q16676 465 aa17.08■□□□□ 0.32
CASC1-211ENST00000556467 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
CASC1-211ENST00000556467 MSH5O43196 834 aa16.21■□□□□ 0.19
CASC1-211ENST00000556467 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
CASC1-211ENST00000556467 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
CASC1-211ENST00000556467 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
CASC1-211ENST00000556467 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
CASC1-211ENST00000556467 ADRA2BP18089 450 aa15.57■□□□□ 0.08
CASC1-211ENST00000556467 ABCC9O60706 1549 aa15.41■□□□□ 0.06
CASC1-211ENST00000556467 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
CASC1-211ENST00000556467 NACADO15069 1562 aa14.77□□□□□ -0.04
CASC1-211ENST00000556467 DCAF8L2P0C7V8 631 aa14.71□□□□□ -0.05
CASC1-211ENST00000556467 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
CASC1-211ENST00000556467 ZCCHC6Q5VYS8 1495 aaKnown RBP14.52□□□□□ -0.08
CASC1-211ENST00000556467 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
CASC1-211ENST00000556467 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
CASC1-211ENST00000556467 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
CASC1-211ENST00000556467 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
CASC1-211ENST00000556467 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
CASC1-211ENST00000556467 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
CASC1-211ENST00000556467 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
CASC1-211ENST00000556467 SCRIBQ14160 1630 aa14.23□□□□□ -0.13
CASC1-211ENST00000556467 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
CASC1-211ENST00000556467 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
CASC1-211ENST00000556467 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
CASC1-211ENST00000556467 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
CASC1-211ENST00000556467 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
CASC1-211ENST00000556467 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
CASC1-211ENST00000556467 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
CASC1-211ENST00000556467 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
CASC1-211ENST00000556467 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
CASC1-211ENST00000556467 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
CASC1-211ENST00000556467 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
CASC1-211ENST00000556467 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
CASC1-211ENST00000556467 SMARCA4P51532 1647 aa13.62□□□□□ -0.23
CASC1-211ENST00000556467 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
CASC1-211ENST00000556467 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
CASC1-211ENST00000556467 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
CASC1-211ENST00000556467 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
CASC1-211ENST00000556467 ATAD2BQ9ULI0 1458 aa13.56□□□□□ -0.24
CASC1-211ENST00000556467 HMGXB3Q12766 1538 aa13.53□□□□□ -0.24
CASC1-211ENST00000556467 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
CASC1-211ENST00000556467 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
CASC1-211ENST00000556467 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
CASC1-211ENST00000556467 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
CASC1-211ENST00000556467 WIZO95785 1651 aa13.33□□□□□ -0.28
CASC1-211ENST00000556467 LAMC3Q9Y6N6 1575 aa13.3□□□□□ -0.28
CASC1-211ENST00000556467 NESP48681 1621 aa13.27□□□□□ -0.29
CASC1-211ENST00000556467 CUX2O14529 1486 aa13.26□□□□□ -0.29
CASC1-211ENST00000556467 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
CASC1-211ENST00000556467 RSF1Q96T23 1441 aaPredicted RBP13.24□□□□□ -0.29
CASC1-211ENST00000556467 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
CASC1-211ENST00000556467 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
CASC1-211ENST00000556467 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
CASC1-211ENST00000556467 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
CASC1-211ENST00000556467 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
CASC1-211ENST00000556467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
CASC1-211ENST00000556467 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
CASC1-211ENST00000556467 CFTRP13569 1480 aa13.07□□□□□ -0.32
CASC1-211ENST00000556467 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
CASC1-211ENST00000556467 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
CASC1-211ENST00000556467 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
CASC1-211ENST00000556467 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
CASC1-211ENST00000556467 CCDC88BA6NC98 1476 aa13.01□□□□□ -0.33
CASC1-211ENST00000556467 WDR62O43379 1518 aa13.01□□□□□ -0.33
CASC1-211ENST00000556467 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
CASC1-211ENST00000556467 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
CASC1-211ENST00000556467 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
CASC1-211ENST00000556467 SUPT5HO00267 1087 aaKnown RBP12.82□□□□□ -0.36
CASC1-211ENST00000556467 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
CASC1-211ENST00000556467 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
CASC1-211ENST00000556467 DNMBPQ6XZF7 1577 aa12.8□□□□□ -0.36
CASC1-211ENST00000556467 IFT140Q96RY7 1462 aa12.78□□□□□ -0.36
CASC1-211ENST00000556467 DSG3P32926 999 aa12.75□□□□□ -0.37
CASC1-211ENST00000556467 POTEHQ6S545 545 aa12.71□□□□□ -0.37
CASC1-211ENST00000556467 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
CASC1-211ENST00000556467 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
CASC1-211ENST00000556467 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
CASC1-211ENST00000556467 POLA1P09884 1462 aaPredicted RBP12.68□□□□□ -0.38
CASC1-211ENST00000556467 CAPN15O75808 1086 aa12.68□□□□□ -0.38
CASC1-211ENST00000556467 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
CASC1-211ENST00000556467 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
CASC1-211ENST00000556467 SOGA1O94964 1423 aa12.65□□□□□ -0.38
CASC1-211ENST00000556467 WDR97A6NE52 1622 aa12.64□□□□□ -0.39
CASC1-211ENST00000556467 CUX1P39880 1505 aa12.63□□□□□ -0.39
CASC1-211ENST00000556467 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
CASC1-211ENST00000556467 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.39
CASC1-211ENST00000556467 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
CASC1-211ENST00000556467 CHD1O14646 1710 aa12.58□□□□□ -0.4
CASC1-211ENST00000556467 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
CASC1-211ENST00000556467 APLP2Q06481 763 aa12.56□□□□□ -0.4
CASC1-211ENST00000556467 FBLN2P98095 1184 aa12.54□□□□□ -0.4
CASC1-211ENST00000556467 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
CASC1-211ENST00000556467 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
CASC1-211ENST00000556467 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms