RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 AEBP2Q6ZN18 517 aaPredicted RBP13.89□□□□□ -0.19
LINC00871-201ENST00000555246 CHIC1Q5VXU3 224 aa13.38□□□□□ -0.27
LINC00871-201ENST00000555246 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
LINC00871-201ENST00000555246 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
LINC00871-201ENST00000555246 PHF23Q9BUL5 403 aaPredicted RBP11.85□□□□□ -0.51
LINC00871-201ENST00000555246 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
LINC00871-201ENST00000555246 ABCC9O60706 1549 aa11.36□□□□□ -0.59
LINC00871-201ENST00000555246 FOXD1Q16676 465 aa11.07□□□□□ -0.64
LINC00871-201ENST00000555246 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
LINC00871-201ENST00000555246 RB1CC1Q8TDY2 1594 aa10.9□□□□□ -0.67
LINC00871-201ENST00000555246 NACADO15069 1562 aa10.86□□□□□ -0.67
LINC00871-201ENST00000555246 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
LINC00871-201ENST00000555246 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
LINC00871-201ENST00000555246 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
LINC00871-201ENST00000555246 ZCCHC6Q5VYS8 1495 aaKnown RBP10.6□□□□□ -0.71
LINC00871-201ENST00000555246 UNC13AQ9UPW8 1703 aa10.59□□□□□ -0.71
LINC00871-201ENST00000555246 BICRAQ9NZM4 1560 aa10.59□□□□□ -0.71
LINC00871-201ENST00000555246 SHROOM4Q9ULL8 1493 aa10.56□□□□□ -0.72
LINC00871-201ENST00000555246 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
LINC00871-201ENST00000555246 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00871-201ENST00000555246 ADRA2BP18089 450 aa10.39□□□□□ -0.75
LINC00871-201ENST00000555246 MSH5O43196 834 aa10.37□□□□□ -0.75
LINC00871-201ENST00000555246 SCRIBQ14160 1630 aa10.35□□□□□ -0.75
LINC00871-201ENST00000555246 EIF4G1Q04637 1599 aaKnown RBP10.32□□□□□ -0.76
LINC00871-201ENST00000555246 PIAS4Q8N2W9 510 aaPredicted RBP10.32□□□□□ -0.76
LINC00871-201ENST00000555246 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
LINC00871-201ENST00000555246 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
LINC00871-201ENST00000555246 CECR2Q9BXF3 1484 aa10.28□□□□□ -0.76
LINC00871-201ENST00000555246 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
LINC00871-201ENST00000555246 KCNA4P22459 653 aa10.12□□□□□ -0.79
LINC00871-201ENST00000555246 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
LINC00871-201ENST00000555246 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
LINC00871-201ENST00000555246 ATAD2BQ9ULI0 1458 aa9.96□□□□□ -0.82
LINC00871-201ENST00000555246 SMARCA2P51531 1590 aa9.95□□□□□ -0.82
LINC00871-201ENST00000555246 SMARCA4P51532 1647 aa9.94□□□□□ -0.82
LINC00871-201ENST00000555246 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
LINC00871-201ENST00000555246 PEG3Q9GZU2 1588 aa9.92□□□□□ -0.82
LINC00871-201ENST00000555246 BAZ1AQ9NRL2 1556 aaPredicted RBP9.91□□□□□ -0.82
LINC00871-201ENST00000555246 CUX2O14529 1486 aa9.91□□□□□ -0.82
LINC00871-201ENST00000555246 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
LINC00871-201ENST00000555246 DNAJC5Q9H3Z4 198 aa9.83□□□□□ -0.84
LINC00871-201ENST00000555246 ERCC6Q03468 1493 aa9.82□□□□□ -0.84
LINC00871-201ENST00000555246 PPP4R3CPQ6ZMV5 832 aa9.81□□□□□ -0.84
LINC00871-201ENST00000555246 MROH2BQ7Z745 1585 aa9.79□□□□□ -0.84
LINC00871-201ENST00000555246 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
LINC00871-201ENST00000555246 NESP48681 1621 aa9.77□□□□□ -0.85
LINC00871-201ENST00000555246 THOC2Q8NI27 1593 aaKnown RBP9.75□□□□□ -0.85
LINC00871-201ENST00000555246 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
LINC00871-201ENST00000555246 SLC4A1APQ9BWU0 796 aaKnown RBP9.69□□□□□ -0.86
LINC00871-201ENST00000555246 CADPSQ9ULU8 1353 aa9.67□□□□□ -0.86
LINC00871-201ENST00000555246 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.86
LINC00871-201ENST00000555246 NCBP3Q53F19 620 aaKnown RBP9.65□□□□□ -0.86
LINC00871-201ENST00000555246 CSRNP3Q8WYN3 585 aa9.65□□□□□ -0.86
LINC00871-201ENST00000555246 WDR62O43379 1518 aa9.63□□□□□ -0.87
LINC00871-201ENST00000555246 WIZO95785 1651 aa9.63□□□□□ -0.87
LINC00871-201ENST00000555246 MRC2Q9UBG0 1479 aa9.62□□□□□ -0.87
LINC00871-201ENST00000555246 RSF1Q96T23 1441 aaPredicted RBP9.6□□□□□ -0.87
LINC00871-201ENST00000555246 CFTRP13569 1480 aa9.59□□□□□ -0.87
LINC00871-201ENST00000555246 TOP2AP11388 1531 aaKnown RBP9.58□□□□□ -0.88
LINC00871-201ENST00000555246 CEP164Q9UPV0 1460 aa9.57□□□□□ -0.88
LINC00871-201ENST00000555246 FANCD2Q9BXW9 1451 aa9.55□□□□□ -0.88
LINC00871-201ENST00000555246 NPM3O75607 178 aaKnown RBP9.55□□□□□ -0.88
LINC00871-201ENST00000555246 URB2Q14146 1524 aaKnown RBP9.48□□□□□ -0.89
LINC00871-201ENST00000555246 PRDM2Q13029 1718 aa9.46□□□□□ -0.89
LINC00871-201ENST00000555246 MAPK8IP2Q13387 824 aaPredicted RBP9.45□□□□□ -0.9
LINC00871-201ENST00000555246 CCDC88BA6NC98 1476 aa9.43□□□□□ -0.9
LINC00871-201ENST00000555246 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
LINC00871-201ENST00000555246 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
LINC00871-201ENST00000555246 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
LINC00871-201ENST00000555246 ABCC8Q09428 1581 aa9.39□□□□□ -0.91
LINC00871-201ENST00000555246 IFT140Q96RY7 1462 aa9.39□□□□□ -0.91
LINC00871-201ENST00000555246 TOPBP1Q92547 1522 aa9.37□□□□□ -0.91
LINC00871-201ENST00000555246 DNMBPQ6XZF7 1577 aa9.36□□□□□ -0.91
LINC00871-201ENST00000555246 OSCARQ8IYS5 282 aa9.35□□□□□ -0.91
LINC00871-201ENST00000555246 ZBTB22O15209 634 aa9.34□□□□□ -0.91
LINC00871-201ENST00000555246 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
LINC00871-201ENST00000555246 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
LINC00871-201ENST00000555246 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
LINC00871-201ENST00000555246 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
LINC00871-201ENST00000555246 WDR97A6NE52 1622 aa9.28□□□□□ -0.92
LINC00871-201ENST00000555246 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
LINC00871-201ENST00000555246 RIMBP3CA6NJZ7 1639 aa9.26□□□□□ -0.93
LINC00871-201ENST00000555246 RIMBP3BA6NNM3 1639 aa9.26□□□□□ -0.93
LINC00871-201ENST00000555246 RIMBP3Q9UFD9 1639 aa9.26□□□□□ -0.93
LINC00871-201ENST00000555246 ARHGEF11O15085 1522 aa9.26□□□□□ -0.93
LINC00871-201ENST00000555246 AQRO60306 1485 aaKnown RBP eCLIP9.23□□□□□ -0.93
LINC00871-201ENST00000555246 CUX1P39880 1505 aa9.21□□□□□ -0.93
LINC00871-201ENST00000555246 FGD5Q6ZNL6 1462 aa9.21□□□□□ -0.94
LINC00871-201ENST00000555246 SOGA1O94964 1423 aa9.2□□□□□ -0.94
LINC00871-201ENST00000555246 MAGI1Q96QZ7 1491 aaPredicted RBP9.2□□□□□ -0.94
LINC00871-201ENST00000555246 RAD54L2Q9Y4B4 1467 aa9.2□□□□□ -0.94
LINC00871-201ENST00000555246 CHD1O14646 1710 aa9.19□□□□□ -0.94
LINC00871-201ENST00000555246 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
LINC00871-201ENST00000555246 GRIN2BQ13224 1484 aa9.16□□□□□ -0.94
LINC00871-201ENST00000555246 SNAPC4Q5SXM2 1469 aa9.16□□□□□ -0.94
LINC00871-201ENST00000555246 ARAP1Q96P48 1450 aa9.16□□□□□ -0.94
LINC00871-201ENST00000555246 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.94
LINC00871-201ENST00000555246 FOXD4L1Q9NU39 408 aa9.15□□□□□ -0.94
LINC00871-201ENST00000555246 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.95
LINC00871-201ENST00000555246 SYNJ2O15056 1496 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms